Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 CKS1BP6-201ENST00000424932 240 ntBASIC4.59□□□□□ -1.67
HOXC4P09017 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC4.59□□□□□ -1.67
HOXC4P09017 AL450263.2-201ENST00000439400 589 ntBASIC4.59□□□□□ -1.67
HOXC4P09017 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.59□□□□□ -1.67
HOXC4P09017 AC009220.1-201ENST00000451614 275 ntBASIC4.59□□□□□ -1.67
HOXC4P09017 OR52Y1P-201ENST00000452418 828 ntBASIC4.59□□□□□ -1.67
HOXC4P09017 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
HOXC4P09017 AC104763.1-201ENST00000475274 360 ntBASIC4.59□□□□□ -1.67
HOXC4P09017 TRBV8-1-201ENST00000481590 279 ntBASIC4.59□□□□□ -1.67
HOXC4P09017 AC093720.1-201ENST00000505681 714 ntBASIC4.59□□□□□ -1.67
HOXC4P09017 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
HOXC4P09017 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.59□□□□□ -1.67
HOXC4P09017 C1GALT1P3-201ENST00000522049 819 ntBASIC4.59□□□□□ -1.67
HOXC4P09017 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
HOXC4P09017 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.59□□□□□ -1.67
HOXC4P09017 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.59□□□□□ -1.67
HOXC4P09017 AC084759.1-201ENST00000561168 290 ntBASIC4.59□□□□□ -1.67
HOXC4P09017 AC234775.3-201ENST00000564612 656 ntBASIC4.59□□□□□ -1.67
HOXC4P09017 AC084783.1-201ENST00000565846 910 ntBASIC4.59□□□□□ -1.67
HOXC4P09017 MIR4284-201ENST00000578924 81 ntBASIC4.59□□□□□ -1.67
HOXC4P09017 AC209154.1-201ENST00000582156 337 ntBASIC4.59□□□□□ -1.67
HOXC4P09017 AC069061.3-201ENST00000582254 823 ntBASIC4.59□□□□□ -1.67
HOXC4P09017 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC4.59□□□□□ -1.67
HOXC4P09017 AC005191.1-201ENST00000603950 358 ntBASIC4.59□□□□□ -1.67
HOXC4P09017 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.59□□□□□ -1.67
HOXC4P09017 AC239803.2-201ENST00000610161 430 ntBASIC4.59□□□□□ -1.67
HOXC4P09017 AC100847.1-201ENST00000611316 481 ntBASIC4.59□□□□□ -1.67
HOXC4P09017 AC009950.2-201ENST00000636548 183 ntBASIC4.59□□□□□ -1.67
HOXC4P09017 CASC19-206ENST00000641028 1430 ntBASIC4.59□□□□□ -1.67
HOXC4P09017 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC4.59□□□□□ -1.67
HOXC4P09017 MAPK10-286ENST00000641208 8747 ntBASIC4.59□□□□□ -1.68
HOXC4P09017 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
HOXC4P09017 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.59□□□□□ -1.68
HOXC4P09017 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.68
HOXC4P09017 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.58□□□□□ -1.68
HOXC4P09017 STX3-208ENST00000641815 3236 ntBASIC4.58□□□□□ -1.68
HOXC4P09017 AL445487.1-201ENST00000415694 1580 ntBASIC4.58□□□□□ -1.68
HOXC4P09017 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.58□□□□□ -1.68
HOXC4P09017 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
HOXC4P09017 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.58□□□□□ -1.68
HOXC4P09017 AC135352.1-201ENST00000506173 1418 ntBASIC4.58□□□□□ -1.68
HOXC4P09017 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HOXC4P09017 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.58□□□□□ -1.68
HOXC4P09017 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.58□□□□□ -1.68
HOXC4P09017 RNU6-167P-201ENST00000384292 106 ntBASIC4.58□□□□□ -1.68
HOXC4P09017 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
HOXC4P09017 OR1F12-201ENST00000402365 945 ntBASIC4.58□□□□□ -1.68
HOXC4P09017 ELOCP19-201ENST00000411919 318 ntBASIC4.58□□□□□ -1.68
HOXC4P09017 AC016397.1-201ENST00000412463 242 ntBASIC4.58□□□□□ -1.68
HOXC4P09017 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC4.58□□□□□ -1.68
HOXC4P09017 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.58□□□□□ -1.68
HOXC4P09017 PTP4A1P1-201ENST00000420539 515 ntBASIC4.58□□□□□ -1.68
HOXC4P09017 AC009480.2-201ENST00000422916 432 ntBASIC4.58□□□□□ -1.68
HOXC4P09017 SETP10-201ENST00000424368 814 ntBASIC4.58□□□□□ -1.68
HOXC4P09017 CENPIP1-201ENST00000425713 902 ntBASIC4.58□□□□□ -1.68
HOXC4P09017 HMGB1P32-201ENST00000425971 565 ntBASIC4.58□□□□□ -1.68
HOXC4P09017 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC4.58□□□□□ -1.68
HOXC4P09017 NMNAT1P2-201ENST00000435192 860 ntBASIC4.58□□□□□ -1.68
HOXC4P09017 SNRPFP2-201ENST00000440710 251 ntBASIC4.58□□□□□ -1.68
HOXC4P09017 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
HOXC4P09017 AC090686.1-201ENST00000481577 749 ntBASIC4.58□□□□□ -1.68
HOXC4P09017 NIP7P2-201ENST00000485801 544 ntBASIC4.58□□□□□ -1.68
HOXC4P09017 BTG4P1-201ENST00000510421 183 ntBASIC4.58□□□□□ -1.68
HOXC4P09017 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.58□□□□□ -1.68
HOXC4P09017 RNA5SP360-201ENST00000516555 118 ntBASIC4.58□□□□□ -1.68
HOXC4P09017 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC4.58□□□□□ -1.68
HOXC4P09017 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.58□□□□□ -1.68
HOXC4P09017 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.58□□□□□ -1.68
HOXC4P09017 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.58□□□□□ -1.68
HOXC4P09017 AL008729.2-201ENST00000606393 473 ntBASIC4.58□□□□□ -1.68
HOXC4P09017 AL023583.1-201ENST00000607518 1143 ntBASIC4.58□□□□□ -1.68
HOXC4P09017 AL353600.1-201ENST00000608148 251 ntBASIC4.58□□□□□ -1.68
HOXC4P09017 AC015914.2-201ENST00000618167 288 ntBASIC4.58□□□□□ -1.68
HOXC4P09017 AL049536.1-201ENST00000625043 744 ntBASIC4.58□□□□□ -1.68
HOXC4P09017 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HOXC4P09017 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
HOXC4P09017 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
HOXC4P09017 AC006971.1-201ENST00000407916 4486 ntBASIC4.58□□□□□ -1.68
HOXC4P09017 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.57□□□□□ -1.68
HOXC4P09017 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HOXC4P09017 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HOXC4P09017 AC108467.2-201ENST00000617640 1597 ntBASIC4.57□□□□□ -1.68
HOXC4P09017 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
HOXC4P09017 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
HOXC4P09017 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
HOXC4P09017 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
HOXC4P09017 MTCO1P22-201ENST00000604619 1360 ntBASIC4.57□□□□□ -1.68
HOXC4P09017 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
HOXC4P09017 AC108751.5-201ENST00000492880 1336 ntBASIC4.57□□□□□ -1.68
HOXC4P09017 MGP-201ENST00000228938 694 ntTSL 3 BASIC4.57□□□□□ -1.68
HOXC4P09017 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.57□□□□□ -1.68
HOXC4P09017 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.57□□□□□ -1.68
HOXC4P09017 OR5M12P-201ENST00000423388 929 ntBASIC4.57□□□□□ -1.68
HOXC4P09017 ARL2BPP10-201ENST00000446487 531 ntBASIC4.57□□□□□ -1.68
HOXC4P09017 RHEBP2-201ENST00000450289 600 ntBASIC4.57□□□□□ -1.68
HOXC4P09017 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC4.57□□□□□ -1.68
HOXC4P09017 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.57□□□□□ -1.68
HOXC4P09017 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.57□□□□□ -1.68
HOXC4P09017 AC239798.3-201ENST00000454459 408 ntBASIC4.57□□□□□ -1.68
HOXC4P09017 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms