Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC2.72□□□□□ -1.97
APOBP04114 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
APOBP04114 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC2.72□□□□□ -1.97
APOBP04114 RNU11-4P-201ENST00000391149 133 ntBASIC2.72□□□□□ -1.97
APOBP04114 RN7SKP159-201ENST00000410657 292 ntBASIC2.72□□□□□ -1.97
APOBP04114 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
APOBP04114 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC2.72□□□□□ -1.97
APOBP04114 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC2.72□□□□□ -1.97
APOBP04114 AL451139.1-201ENST00000434718 346 ntBASIC2.72□□□□□ -1.97
APOBP04114 UBE2V1P3-201ENST00000439651 417 ntBASIC2.72□□□□□ -1.97
APOBP04114 AC004980.3-201ENST00000447046 365 ntBASIC2.72□□□□□ -1.97
APOBP04114 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC2.72□□□□□ -1.97
APOBP04114 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC2.72□□□□□ -1.97
APOBP04114 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC2.72□□□□□ -1.97
APOBP04114 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC2.72□□□□□ -1.97
APOBP04114 BPIFA4P-203ENST00000603168 689 ntBASIC2.72□□□□□ -1.97
APOBP04114 AC079880.2-201ENST00000603790 1213 ntBASIC2.72□□□□□ -1.97
APOBP04114 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC2.72□□□□□ -1.97
APOBP04114 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC2.72□□□□□ -1.97
APOBP04114 AC139769.1-204ENST00000472297 1931 ntBASIC2.72□□□□□ -1.97
APOBP04114 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC2.71□□□□□ -1.97
APOBP04114 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC2.71□□□□□ -1.97
APOBP04114 AC090312.1-201ENST00000580637 348 ntBASIC2.71□□□□□ -1.97
APOBP04114 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC2.71□□□□□ -1.97
APOBP04114 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC2.71□□□□□ -1.97
APOBP04114 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC2.71□□□□□ -1.97
APOBP04114 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
APOBP04114 RTTN-222ENST00000640769 8088 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
APOBP04114 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.98
APOBP04114 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
APOBP04114 DHX9P1-201ENST00000436565 3076 ntBASIC2.71□□□□□ -1.98
APOBP04114 GON4L-203ENST00000368331 7823 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.98
APOBP04114 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC2.71□□□□□ -1.98
APOBP04114 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.71□□□□□ -1.98
APOBP04114 ACTR3BP4-201ENST00000503033 1244 ntBASIC2.71□□□□□ -1.98
APOBP04114 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC2.71□□□□□ -1.98
APOBP04114 MTND1P6-201ENST00000523621 946 ntBASIC2.71□□□□□ -1.98
APOBP04114 MIR5685-201ENST00000579080 79 ntBASIC2.71□□□□□ -1.98
APOBP04114 AC113403.1-201ENST00000604910 193 ntBASIC2.71□□□□□ -1.98
APOBP04114 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
APOBP04114 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.98
APOBP04114 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
APOBP04114 TNPO1-201ENST00000337273 11183 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
APOBP04114 RUNX1T1-205ENST00000436581 7454 ntTSL 5 BASIC2.71□□□□□ -1.98
APOBP04114 SLC6A14-202ENST00000598581 4520 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
APOBP04114 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
APOBP04114 CFAP54-202ENST00000524981 9766 ntAPPRIS P2 TSL 5 BASIC2.71□□□□□ -1.98
APOBP04114 RPL21P17-201ENST00000397467 475 ntBASIC2.71□□□□□ -1.98
APOBP04114 RAB9AP3-201ENST00000412737 573 ntBASIC2.71□□□□□ -1.98
APOBP04114 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC2.71□□□□□ -1.98
APOBP04114 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC2.71□□□□□ -1.98
APOBP04114 RAB9AP1-201ENST00000449393 573 ntBASIC2.71□□□□□ -1.98
APOBP04114 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.71□□□□□ -1.98
APOBP04114 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC2.71□□□□□ -1.98
APOBP04114 AC105233.3-201ENST00000531125 744 ntBASIC2.71□□□□□ -1.98
APOBP04114 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC2.71□□□□□ -1.98
APOBP04114 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC2.71□□□□□ -1.98
APOBP04114 OR7A19P-201ENST00000608051 733 ntBASIC2.71□□□□□ -1.98
APOBP04114 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC2.71□□□□□ -1.98
APOBP04114 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
APOBP04114 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
APOBP04114 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
APOBP04114 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
APOBP04114 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.98
APOBP04114 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
APOBP04114 KIDINS220-206ENST00000473731 7248 ntTSL 5 BASIC2.71□□□□□ -1.98
APOBP04114 TP53BP1-203ENST00000382044 10384 ntAPPRIS ALT2 TSL 1 (best) BASIC2.71□□□□□ -1.98
APOBP04114 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
APOBP04114 AC073136.1-201ENST00000449426 2884 ntBASIC2.71□□□□□ -1.98
APOBP04114 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC2.71□□□□□ -1.98
APOBP04114 AC015849.5-201ENST00000604907 5473 ntTSL 2 BASIC2.71□□□□□ -1.98
APOBP04114 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
APOBP04114 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC2.71□□□□□ -1.98
APOBP04114 AP000357.1-201ENST00000409926 1165 ntBASIC2.71□□□□□ -1.98
APOBP04114 GAPDHP36-201ENST00000480688 918 ntBASIC2.71□□□□□ -1.98
APOBP04114 IFITM8P-201ENST00000522529 394 ntBASIC2.71□□□□□ -1.98
APOBP04114 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC2.71□□□□□ -1.98
APOBP04114 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC2.71□□□□□ -1.98
APOBP04114 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC2.71□□□□□ -1.98
APOBP04114 AC099669.2-201ENST00000616549 437 ntBASIC2.71□□□□□ -1.98
APOBP04114 TEX41-265ENST00000627785 704 ntTSL 5 BASIC2.71□□□□□ -1.98
APOBP04114 TEX41-280ENST00000629185 591 ntTSL 5 BASIC2.71□□□□□ -1.98
APOBP04114 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC2.71□□□□□ -1.98
APOBP04114 PPFIA2-201ENST00000333447 5517 ntTSL 5 BASIC2.71□□□□□ -1.98
APOBP04114 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
APOBP04114 NACA-203ENST00000454682 6629 ntTSL 5 BASIC2.71□□□□□ -1.98
APOBP04114 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC2.71□□□□□ -1.98
APOBP04114 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC2.7□□□□□ -1.98
APOBP04114 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
APOBP04114 EIF3EP2-201ENST00000423042 1814 ntBASIC2.7□□□□□ -1.98
APOBP04114 AL133243.3-201ENST00000617415 3004 ntBASIC2.7□□□□□ -1.98
APOBP04114 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
APOBP04114 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
APOBP04114 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
APOBP04114 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
APOBP04114 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
APOBP04114 RNA5SP432-201ENST00000362480 116 ntBASIC2.7□□□□□ -1.98
APOBP04114 RN7SL197P-201ENST00000466981 299 ntBASIC2.7□□□□□ -1.98
APOBP04114 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC2.7□□□□□ -1.98
APOBP04114 RN7SL132P-201ENST00000478131 296 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms