Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.5□□□□□ -1.53
PHGDHO43175 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.49□□□□□ -1.53
PHGDHO43175 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PHGDHO43175 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PHGDHO43175 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.49□□□□□ -1.53
PHGDHO43175 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PHGDHO43175 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
PHGDHO43175 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PHGDHO43175 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.49□□□□□ -1.53
PHGDHO43175 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PHGDHO43175 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PHGDHO43175 snoZ40.1-201ENST00000364540 72 ntBASIC5.49□□□□□ -1.53
PHGDHO43175 SNORD116.1-201ENST00000365628 92 ntBASIC5.49□□□□□ -1.53
PHGDHO43175 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PHGDHO43175 SNORD56.6-201ENST00000384569 71 ntBASIC5.49□□□□□ -1.53
PHGDHO43175 OR7E101P-201ENST00000400428 513 ntBASIC5.49□□□□□ -1.53
PHGDHO43175 AL049545.1-201ENST00000401856 572 ntBASIC5.49□□□□□ -1.53
PHGDHO43175 PPIAP9-201ENST00000403866 498 ntBASIC5.49□□□□□ -1.53
PHGDHO43175 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC5.49□□□□□ -1.53
PHGDHO43175 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC5.49□□□□□ -1.53
PHGDHO43175 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PHGDHO43175 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC5.49□□□□□ -1.53
PHGDHO43175 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC5.49□□□□□ -1.53
PHGDHO43175 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.49□□□□□ -1.53
PHGDHO43175 AC007161.1-204ENST00000423039 460 ntBASIC5.49□□□□□ -1.53
PHGDHO43175 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC5.49□□□□□ -1.53
PHGDHO43175 NANOGP4-201ENST00000427230 913 ntBASIC5.49□□□□□ -1.53
PHGDHO43175 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.49□□□□□ -1.53
PHGDHO43175 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.49□□□□□ -1.53
PHGDHO43175 RPL21P110-201ENST00000433345 446 ntBASIC5.49□□□□□ -1.53
PHGDHO43175 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC5.49□□□□□ -1.53
PHGDHO43175 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC5.49□□□□□ -1.53
PHGDHO43175 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.49□□□□□ -1.53
PHGDHO43175 MRPL42P4-201ENST00000453267 443 ntBASIC5.49□□□□□ -1.53
PHGDHO43175 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC5.49□□□□□ -1.53
PHGDHO43175 RN7SL170P-201ENST00000487098 295 ntBASIC5.49□□□□□ -1.53
PHGDHO43175 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.49□□□□□ -1.53
PHGDHO43175 AP000563.1-201ENST00000490865 758 ntBASIC5.49□□□□□ -1.53
PHGDHO43175 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC5.49□□□□□ -1.53
PHGDHO43175 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PHGDHO43175 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC5.49□□□□□ -1.53
PHGDHO43175 AC118282.2-201ENST00000508739 374 ntBASIC5.49□□□□□ -1.53
PHGDHO43175 AC026782.2-201ENST00000510845 636 ntBASIC5.49□□□□□ -1.53
PHGDHO43175 AC091912.1-201ENST00000511351 248 ntBASIC5.49□□□□□ -1.53
PHGDHO43175 RNA5SP473-201ENST00000516402 125 ntBASIC5.49□□□□□ -1.53
PHGDHO43175 SNORA70.20-201ENST00000516848 126 ntBASIC5.49□□□□□ -1.53
PHGDHO43175 AC060775.1-201ENST00000518241 520 ntBASIC5.49□□□□□ -1.53
PHGDHO43175 IGKV2-36-201ENST00000519999 223 ntBASIC5.49□□□□□ -1.53
PHGDHO43175 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.49□□□□□ -1.53
PHGDHO43175 AC092747.2-201ENST00000545069 983 ntBASIC5.49□□□□□ -1.53
PHGDHO43175 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
PHGDHO43175 AL359219.2-201ENST00000555184 348 ntBASIC5.49□□□□□ -1.53
PHGDHO43175 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC5.49□□□□□ -1.53
PHGDHO43175 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC5.49□□□□□ -1.53
PHGDHO43175 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC5.49□□□□□ -1.53
PHGDHO43175 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
PHGDHO43175 AP005137.2-201ENST00000609238 400 ntBASIC5.49□□□□□ -1.53
PHGDHO43175 TUSC7.1-201ENST00000610969 165 ntBASIC5.49□□□□□ -1.53
PHGDHO43175 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PHGDHO43175 AC025574.2-201ENST00000615621 514 ntBASIC5.49□□□□□ -1.53
PHGDHO43175 Six3os1_2.1-201ENST00000616963 217 ntBASIC5.49□□□□□ -1.53
PHGDHO43175 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.49□□□□□ -1.53
PHGDHO43175 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC5.49□□□□□ -1.53
PHGDHO43175 AC099654.6-201ENST00000636487 512 ntBASIC5.49□□□□□ -1.53
PHGDHO43175 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
PHGDHO43175 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
PHGDHO43175 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
PHGDHO43175 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PHGDHO43175 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.49□□□□□ -1.53
PHGDHO43175 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.49□□□□□ -1.53
PHGDHO43175 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PHGDHO43175 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
PHGDHO43175 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PHGDHO43175 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PHGDHO43175 AC106872.5-201ENST00000508856 1416 ntBASIC5.48□□□□□ -1.53
PHGDHO43175 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PHGDHO43175 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PHGDHO43175 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PHGDHO43175 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PHGDHO43175 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.48□□□□□ -1.53
PHGDHO43175 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PHGDHO43175 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
PHGDHO43175 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.48□□□□□ -1.53
PHGDHO43175 AC046144.1-201ENST00000478559 1853 ntBASIC5.48□□□□□ -1.53
PHGDHO43175 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.48□□□□□ -1.53
PHGDHO43175 TCP11X1-202ENST00000622971 1372 ntBASIC5.48□□□□□ -1.53
PHGDHO43175 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PHGDHO43175 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC5.48□□□□□ -1.53
PHGDHO43175 HMGB1P20-201ENST00000402555 677 ntBASIC5.48□□□□□ -1.53
PHGDHO43175 RNU6-575P-201ENST00000411326 105 ntBASIC5.48□□□□□ -1.53
PHGDHO43175 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.48□□□□□ -1.53
PHGDHO43175 AL009174.1-201ENST00000426577 416 ntBASIC5.48□□□□□ -1.53
PHGDHO43175 AC073069.1-201ENST00000428657 441 ntBASIC5.48□□□□□ -1.53
PHGDHO43175 AL136231.1-201ENST00000429407 730 ntBASIC5.48□□□□□ -1.53
PHGDHO43175 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.48□□□□□ -1.53
PHGDHO43175 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC5.48□□□□□ -1.53
PHGDHO43175 YWHAQP9-201ENST00000445891 512 ntBASIC5.48□□□□□ -1.53
PHGDHO43175 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC5.48□□□□□ -1.53
PHGDHO43175 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC5.48□□□□□ -1.53
PHGDHO43175 OR52E7P-201ENST00000452394 933 ntBASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms