Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC6.33□□□□□ -1.4
CTDP1Q9Y5B0 HMGB1P44-201ENST00000508597 572 ntBASIC6.33□□□□□ -1.4
CTDP1Q9Y5B0 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC6.33□□□□□ -1.4
CTDP1Q9Y5B0 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC6.33□□□□□ -1.4
CTDP1Q9Y5B0 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CTDP1Q9Y5B0 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC6.33□□□□□ -1.4
CTDP1Q9Y5B0 AC090819.1-201ENST00000523800 1111 ntBASIC6.33□□□□□ -1.4
CTDP1Q9Y5B0 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC6.33□□□□□ -1.4
CTDP1Q9Y5B0 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC6.33□□□□□ -1.4
CTDP1Q9Y5B0 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC6.33□□□□□ -1.4
CTDP1Q9Y5B0 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC6.33□□□□□ -1.4
CTDP1Q9Y5B0 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC6.33□□□□□ -1.4
CTDP1Q9Y5B0 HMGN2P6-201ENST00000551091 273 ntBASIC6.33□□□□□ -1.4
CTDP1Q9Y5B0 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC6.33□□□□□ -1.4
CTDP1Q9Y5B0 AC018552.1-201ENST00000562099 811 ntBASIC6.33□□□□□ -1.4
CTDP1Q9Y5B0 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CTDP1Q9Y5B0 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC6.33□□□□□ -1.4
CTDP1Q9Y5B0 RBM22P1-201ENST00000578589 1214 ntBASIC6.33□□□□□ -1.4
CTDP1Q9Y5B0 AL109653.1-201ENST00000603091 248 ntBASIC6.33□□□□□ -1.4
CTDP1Q9Y5B0 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC6.33□□□□□ -1.4
CTDP1Q9Y5B0 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC6.33□□□□□ -1.4
CTDP1Q9Y5B0 AC105105.5-201ENST00000622635 1294 ntBASIC6.33□□□□□ -1.4
CTDP1Q9Y5B0 AP002782.1-201ENST00000623107 614 ntBASIC6.33□□□□□ -1.4
CTDP1Q9Y5B0 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CTDP1Q9Y5B0 AP000473.2-201ENST00000602659 1537 ntBASIC6.33□□□□□ -1.4
CTDP1Q9Y5B0 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC6.33□□□□□ -1.4
CTDP1Q9Y5B0 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CTDP1Q9Y5B0 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CTDP1Q9Y5B0 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CTDP1Q9Y5B0 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CTDP1Q9Y5B0 AC068870.1-201ENST00000563737 2455 ntBASIC6.33□□□□□ -1.4
CTDP1Q9Y5B0 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC6.33□□□□□ -1.4
CTDP1Q9Y5B0 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CTDP1Q9Y5B0 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CTDP1Q9Y5B0 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC6.32□□□□□ -1.4
CTDP1Q9Y5B0 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
CTDP1Q9Y5B0 Z98755.1-201ENST00000407015 1384 ntBASIC6.32□□□□□ -1.4
CTDP1Q9Y5B0 TRIM51GP-201ENST00000534741 1350 ntBASIC6.32□□□□□ -1.4
CTDP1Q9Y5B0 AC011493.1-201ENST00000596753 1632 ntBASIC6.32□□□□□ -1.4
CTDP1Q9Y5B0 AC007938.2-201ENST00000604666 2634 ntBASIC6.32□□□□□ -1.4
CTDP1Q9Y5B0 DDX43P2-201ENST00000604753 1354 ntBASIC6.32□□□□□ -1.4
CTDP1Q9Y5B0 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC6.32□□□□□ -1.4
CTDP1Q9Y5B0 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC6.32□□□□□ -1.4
CTDP1Q9Y5B0 RALGAPA1P1-201ENST00000443361 6232 ntBASIC6.32□□□□□ -1.4
CTDP1Q9Y5B0 OR4F13P-202ENST00000560066 2054 ntBASIC6.32□□□□□ -1.4
CTDP1Q9Y5B0 AL359955.1-201ENST00000455242 3275 ntBASIC6.32□□□□□ -1.4
CTDP1Q9Y5B0 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CTDP1Q9Y5B0 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC6.32□□□□□ -1.4
CTDP1Q9Y5B0 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
CTDP1Q9Y5B0 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC6.32□□□□□ -1.4
CTDP1Q9Y5B0 OR5H2-201ENST00000355273 945 ntBASIC6.32□□□□□ -1.4
CTDP1Q9Y5B0 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
CTDP1Q9Y5B0 MIR133B-201ENST00000362210 119 ntBASIC6.32□□□□□ -1.4
CTDP1Q9Y5B0 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
CTDP1Q9Y5B0 RNU1-149P-201ENST00000390870 161 ntBASIC6.32□□□□□ -1.4
CTDP1Q9Y5B0 HSPA8P15-201ENST00000401676 786 ntBASIC6.32□□□□□ -1.4
CTDP1Q9Y5B0 MIR1302-8-201ENST00000408342 128 ntBASIC6.32□□□□□ -1.4
CTDP1Q9Y5B0 RN7SKP213-201ENST00000410746 298 ntBASIC6.32□□□□□ -1.4
CTDP1Q9Y5B0 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC6.32□□□□□ -1.4
CTDP1Q9Y5B0 METTL15P3-201ENST00000415522 1221 ntBASIC6.32□□□□□ -1.4
CTDP1Q9Y5B0 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC6.32□□□□□ -1.4
CTDP1Q9Y5B0 AC007394.1-201ENST00000421941 531 ntBASIC6.32□□□□□ -1.4
CTDP1Q9Y5B0 SRSF1P1-201ENST00000424058 520 ntBASIC6.32□□□□□ -1.4
CTDP1Q9Y5B0 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CTDP1Q9Y5B0 USP24P1-201ENST00000433802 779 ntBASIC6.32□□□□□ -1.4
CTDP1Q9Y5B0 OR52B5P-201ENST00000435337 951 ntBASIC6.32□□□□□ -1.4
CTDP1Q9Y5B0 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC6.32□□□□□ -1.4
CTDP1Q9Y5B0 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC6.32□□□□□ -1.4
CTDP1Q9Y5B0 RPL12P18-201ENST00000437175 325 ntBASIC6.32□□□□□ -1.4
CTDP1Q9Y5B0 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC6.32□□□□□ -1.4
CTDP1Q9Y5B0 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC6.32□□□□□ -1.4
CTDP1Q9Y5B0 IGBP1P3-201ENST00000447449 1000 ntBASIC6.32□□□□□ -1.4
CTDP1Q9Y5B0 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC6.32□□□□□ -1.4
CTDP1Q9Y5B0 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC6.32□□□□□ -1.4
CTDP1Q9Y5B0 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC6.32□□□□□ -1.4
CTDP1Q9Y5B0 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC6.32□□□□□ -1.4
CTDP1Q9Y5B0 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CTDP1Q9Y5B0 RPSAP50-201ENST00000481955 852 ntBASIC6.32□□□□□ -1.4
CTDP1Q9Y5B0 AC008953.1-201ENST00000497334 318 ntBASIC6.32□□□□□ -1.4
CTDP1Q9Y5B0 AC021193.1-201ENST00000511607 420 ntBASIC6.32□□□□□ -1.4
CTDP1Q9Y5B0 Y_RNA.655-201ENST00000515919 96 ntBASIC6.32□□□□□ -1.4
CTDP1Q9Y5B0 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC6.32□□□□□ -1.4
CTDP1Q9Y5B0 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC6.32□□□□□ -1.4
CTDP1Q9Y5B0 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC6.32□□□□□ -1.4
CTDP1Q9Y5B0 AC022832.1-201ENST00000530718 645 ntBASIC6.32□□□□□ -1.4
CTDP1Q9Y5B0 OR5AM1P-201ENST00000532136 1032 ntBASIC6.32□□□□□ -1.4
CTDP1Q9Y5B0 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC6.32□□□□□ -1.4
CTDP1Q9Y5B0 MTND4P33-201ENST00000556706 766 ntBASIC6.32□□□□□ -1.4
CTDP1Q9Y5B0 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC6.32□□□□□ -1.4
CTDP1Q9Y5B0 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC6.32□□□□□ -1.4
CTDP1Q9Y5B0 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC6.32□□□□□ -1.4
CTDP1Q9Y5B0 AC002069.2-201ENST00000603580 883 ntBASIC6.32□□□□□ -1.4
CTDP1Q9Y5B0 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC6.32□□□□□ -1.4
CTDP1Q9Y5B0 AP001005.3-201ENST00000622049 129 ntBASIC6.32□□□□□ -1.4
CTDP1Q9Y5B0 AC017037.3-201ENST00000625016 472 ntBASIC6.32□□□□□ -1.4
CTDP1Q9Y5B0 AC090897.3-201ENST00000636973 1157 ntBASIC6.32□□□□□ -1.4
CTDP1Q9Y5B0 OR52B5P-202ENST00000641118 1110 ntBASIC6.32□□□□□ -1.4
CTDP1Q9Y5B0 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
CTDP1Q9Y5B0 AL031595.2-201ENST00000624215 19071 ntBASIC6.32□□□□□ -1.4
CTDP1Q9Y5B0 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms