Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC8.38□□□□□ -1.07
PDZRN3Q9UPQ7 OR52H2P-201ENST00000514607 902 ntBASIC8.38□□□□□ -1.07
PDZRN3Q9UPQ7 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC8.38□□□□□ -1.07
PDZRN3Q9UPQ7 IGHV3-57-201ENST00000520143 280 ntBASIC8.38□□□□□ -1.07
PDZRN3Q9UPQ7 IGKV1OR22-1-201ENST00000521497 360 ntBASIC8.38□□□□□ -1.07
PDZRN3Q9UPQ7 IGKV3D-34-201ENST00000522638 302 ntBASIC8.38□□□□□ -1.07
PDZRN3Q9UPQ7 CYCSP25-201ENST00000525280 316 ntBASIC8.38□□□□□ -1.07
PDZRN3Q9UPQ7 MTND1P35-201ENST00000526739 508 ntBASIC8.38□□□□□ -1.07
PDZRN3Q9UPQ7 NPIPB14P-203ENST00000532298 987 ntBASIC8.38□□□□□ -1.07
PDZRN3Q9UPQ7 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC8.38□□□□□ -1.07
PDZRN3Q9UPQ7 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
PDZRN3Q9UPQ7 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC8.38□□□□□ -1.07
PDZRN3Q9UPQ7 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC8.38□□□□□ -1.07
PDZRN3Q9UPQ7 AC007448.1-201ENST00000582714 234 ntBASIC8.38□□□□□ -1.07
PDZRN3Q9UPQ7 RN7SL622P-201ENST00000585292 275 ntBASIC8.38□□□□□ -1.07
PDZRN3Q9UPQ7 AC124916.2-201ENST00000604416 224 ntBASIC8.38□□□□□ -1.07
PDZRN3Q9UPQ7 BNIP3P10-201ENST00000605360 577 ntBASIC8.38□□□□□ -1.07
PDZRN3Q9UPQ7 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
PDZRN3Q9UPQ7 AC091905.1-201ENST00000624400 311 ntBASIC8.38□□□□□ -1.07
PDZRN3Q9UPQ7 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC8.38□□□□□ -1.07
PDZRN3Q9UPQ7 MIR6863-201ENST00000636112 90 ntBASIC8.38□□□□□ -1.07
PDZRN3Q9UPQ7 NBPF9-205ENST00000613595 4527 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
PDZRN3Q9UPQ7 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
PDZRN3Q9UPQ7 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
PDZRN3Q9UPQ7 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
PDZRN3Q9UPQ7 AC074141.1-201ENST00000588129 2995 ntBASIC8.38□□□□□ -1.07
PDZRN3Q9UPQ7 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC8.38□□□□□ -1.07
PDZRN3Q9UPQ7 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
PDZRN3Q9UPQ7 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
PDZRN3Q9UPQ7 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC8.38□□□□□ -1.07
PDZRN3Q9UPQ7 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC8.38□□□□□ -1.07
PDZRN3Q9UPQ7 ANK2-212ENST00000506722 8051 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
PDZRN3Q9UPQ7 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
PDZRN3Q9UPQ7 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC8.37□□□□□ -1.07
PDZRN3Q9UPQ7 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
PDZRN3Q9UPQ7 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
PDZRN3Q9UPQ7 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC8.37□□□□□ -1.07
PDZRN3Q9UPQ7 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
PDZRN3Q9UPQ7 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC8.37□□□□□ -1.07
PDZRN3Q9UPQ7 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
PDZRN3Q9UPQ7 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
PDZRN3Q9UPQ7 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
PDZRN3Q9UPQ7 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
PDZRN3Q9UPQ7 OR4K15-201ENST00000305051 1216 ntBASIC8.37□□□□□ -1.07
PDZRN3Q9UPQ7 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC8.37□□□□□ -1.07
PDZRN3Q9UPQ7 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
PDZRN3Q9UPQ7 AL096711.1-201ENST00000404780 554 ntBASIC8.37□□□□□ -1.07
PDZRN3Q9UPQ7 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC8.37□□□□□ -1.07
PDZRN3Q9UPQ7 TATDN1P1-201ENST00000414123 891 ntBASIC8.37□□□□□ -1.07
PDZRN3Q9UPQ7 AC113618.1-201ENST00000416747 285 ntBASIC8.37□□□□□ -1.07
PDZRN3Q9UPQ7 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC8.37□□□□□ -1.07
PDZRN3Q9UPQ7 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC8.37□□□□□ -1.07
PDZRN3Q9UPQ7 AL035410.1-201ENST00000427409 427 ntBASIC8.37□□□□□ -1.07
PDZRN3Q9UPQ7 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC8.37□□□□□ -1.07
PDZRN3Q9UPQ7 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC8.37□□□□□ -1.07
PDZRN3Q9UPQ7 AC010655.3-201ENST00000478818 450 ntBASIC8.37□□□□□ -1.07
PDZRN3Q9UPQ7 LARP1BP2-201ENST00000486594 519 ntBASIC8.37□□□□□ -1.07
PDZRN3Q9UPQ7 RPS4XP15-201ENST00000489210 795 ntBASIC8.37□□□□□ -1.07
PDZRN3Q9UPQ7 SCG5-207ENST00000497208 949 ntTSL 5 BASIC8.37□□□□□ -1.07
PDZRN3Q9UPQ7 AC133963.2-201ENST00000513686 578 ntBASIC8.37□□□□□ -1.07
PDZRN3Q9UPQ7 SNORA81.2-201ENST00000516868 170 ntBASIC8.37□□□□□ -1.07
PDZRN3Q9UPQ7 RAD21-204ENST00000518055 896 ntTSL 2 BASIC8.37□□□□□ -1.07
PDZRN3Q9UPQ7 TBCA-209ENST00000522370 435 ntTSL 3 BASIC8.37□□□□□ -1.07
PDZRN3Q9UPQ7 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC8.37□□□□□ -1.07
PDZRN3Q9UPQ7 AC018630.1-201ENST00000541376 925 ntBASIC8.37□□□□□ -1.07
PDZRN3Q9UPQ7 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC8.37□□□□□ -1.07
PDZRN3Q9UPQ7 AC023968.1-201ENST00000560719 475 ntBASIC8.37□□□□□ -1.07
PDZRN3Q9UPQ7 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC8.37□□□□□ -1.07
PDZRN3Q9UPQ7 AC093249.1-201ENST00000567049 203 ntBASIC8.37□□□□□ -1.07
PDZRN3Q9UPQ7 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC8.37□□□□□ -1.07
PDZRN3Q9UPQ7 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC8.37□□□□□ -1.07
PDZRN3Q9UPQ7 AL589863.1-201ENST00000595383 631 ntBASIC8.37□□□□□ -1.07
PDZRN3Q9UPQ7 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC8.37□□□□□ -1.07
PDZRN3Q9UPQ7 AP001267.4-201ENST00000602598 545 ntBASIC8.37□□□□□ -1.07
PDZRN3Q9UPQ7 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC8.37□□□□□ -1.07
PDZRN3Q9UPQ7 AL138895.2-201ENST00000603019 178 ntBASIC8.37□□□□□ -1.07
PDZRN3Q9UPQ7 SEPT7P9-203ENST00000604116 343 ntBASIC8.37□□□□□ -1.07
PDZRN3Q9UPQ7 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
PDZRN3Q9UPQ7 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC8.37□□□□□ -1.07
PDZRN3Q9UPQ7 AC006065.6-201ENST00000625201 545 ntBASIC8.37□□□□□ -1.07
PDZRN3Q9UPQ7 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
PDZRN3Q9UPQ7 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
PDZRN3Q9UPQ7 ST7-203ENST00000393443 2360 ntTSL 2 BASIC8.37□□□□□ -1.07
PDZRN3Q9UPQ7 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC8.37□□□□□ -1.07
PDZRN3Q9UPQ7 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
PDZRN3Q9UPQ7 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
PDZRN3Q9UPQ7 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC8.37□□□□□ -1.07
PDZRN3Q9UPQ7 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
PDZRN3Q9UPQ7 NOSTRIN-209ENST00000458381 2535 ntTSL 2 BASIC8.37□□□□□ -1.07
PDZRN3Q9UPQ7 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
PDZRN3Q9UPQ7 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
PDZRN3Q9UPQ7 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC8.37□□□□□ -1.07
PDZRN3Q9UPQ7 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
PDZRN3Q9UPQ7 AC022034.1-201ENST00000512867 2156 ntBASIC8.37□□□□□ -1.07
PDZRN3Q9UPQ7 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
PDZRN3Q9UPQ7 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC8.36□□□□□ -1.07
PDZRN3Q9UPQ7 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
PDZRN3Q9UPQ7 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC8.36□□□□□ -1.07
PDZRN3Q9UPQ7 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
PDZRN3Q9UPQ7 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms