Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC6.16□□□□□ -1.42
NPC1L1Q9UHC9 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
NPC1L1Q9UHC9 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC6.16□□□□□ -1.42
NPC1L1Q9UHC9 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
NPC1L1Q9UHC9 MIR4433B-201ENST00000581329 102 ntBASIC6.16□□□□□ -1.42
NPC1L1Q9UHC9 AP001160.4-201ENST00000596971 382 ntBASIC6.16□□□□□ -1.42
NPC1L1Q9UHC9 AL133243.1-201ENST00000614487 366 ntBASIC6.16□□□□□ -1.42
NPC1L1Q9UHC9 AC068831.8-201ENST00000620171 435 ntBASIC6.16□□□□□ -1.42
NPC1L1Q9UHC9 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
NPC1L1Q9UHC9 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC6.16□□□□□ -1.42
NPC1L1Q9UHC9 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
NPC1L1Q9UHC9 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
NPC1L1Q9UHC9 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC6.15□□□□□ -1.42
NPC1L1Q9UHC9 AL136164.3-201ENST00000624429 3978 ntBASIC6.15□□□□□ -1.42
NPC1L1Q9UHC9 FAM3C2-201ENST00000312214 681 ntBASIC6.15□□□□□ -1.43
NPC1L1Q9UHC9 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
NPC1L1Q9UHC9 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
NPC1L1Q9UHC9 TRAV35-201ENST00000390462 330 ntBASIC6.15□□□□□ -1.43
NPC1L1Q9UHC9 FCF1P5-201ENST00000406490 482 ntBASIC6.15□□□□□ -1.43
NPC1L1Q9UHC9 AC004690.1-201ENST00000418216 328 ntBASIC6.15□□□□□ -1.43
NPC1L1Q9UHC9 NDUFA5P1-201ENST00000433858 341 ntBASIC6.15□□□□□ -1.43
NPC1L1Q9UHC9 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC6.15□□□□□ -1.43
NPC1L1Q9UHC9 RPL23AP93-201ENST00000440847 484 ntBASIC6.15□□□□□ -1.43
NPC1L1Q9UHC9 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
NPC1L1Q9UHC9 ATP5G1P3-201ENST00000463301 410 ntBASIC6.15□□□□□ -1.43
NPC1L1Q9UHC9 NIP7P2-201ENST00000485801 544 ntBASIC6.15□□□□□ -1.43
NPC1L1Q9UHC9 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC6.15□□□□□ -1.43
NPC1L1Q9UHC9 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC6.15□□□□□ -1.43
NPC1L1Q9UHC9 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC6.15□□□□□ -1.43
NPC1L1Q9UHC9 AC069061.3-201ENST00000582254 823 ntBASIC6.15□□□□□ -1.43
NPC1L1Q9UHC9 MIR4715-201ENST00000584117 79 ntBASIC6.15□□□□□ -1.43
NPC1L1Q9UHC9 ADAD1P2-201ENST00000588476 646 ntBASIC6.15□□□□□ -1.43
NPC1L1Q9UHC9 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
NPC1L1Q9UHC9 SNORD91B-202ENST00000608459 222 ntBASIC6.15□□□□□ -1.43
NPC1L1Q9UHC9 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC6.15□□□□□ -1.43
NPC1L1Q9UHC9 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC6.14□□□□□ -1.43
NPC1L1Q9UHC9 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
NPC1L1Q9UHC9 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC6.14□□□□□ -1.43
NPC1L1Q9UHC9 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
NPC1L1Q9UHC9 AC097063.1-201ENST00000426714 1797 ntBASIC6.14□□□□□ -1.43
NPC1L1Q9UHC9 AC108467.2-201ENST00000617640 1597 ntBASIC6.14□□□□□ -1.43
NPC1L1Q9UHC9 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
NPC1L1Q9UHC9 RNA5-8SP7-201ENST00000363443 155 ntBASIC6.14□□□□□ -1.43
NPC1L1Q9UHC9 AC062016.2-201ENST00000420950 676 ntBASIC6.14□□□□□ -1.43
NPC1L1Q9UHC9 AC006065.1-201ENST00000422539 802 ntBASIC6.14□□□□□ -1.43
NPC1L1Q9UHC9 RSL24D1P6-201ENST00000426934 401 ntBASIC6.14□□□□□ -1.43
NPC1L1Q9UHC9 SCP2-206ENST00000430330 938 ntTSL 2 BASIC6.14□□□□□ -1.43
NPC1L1Q9UHC9 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC6.14□□□□□ -1.43
NPC1L1Q9UHC9 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC6.14□□□□□ -1.43
NPC1L1Q9UHC9 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC6.14□□□□□ -1.43
NPC1L1Q9UHC9 RPL7AP10-201ENST00000481016 791 ntBASIC6.14□□□□□ -1.43
NPC1L1Q9UHC9 F11-205ENST00000492972 1204 ntTSL 2 BASIC6.14□□□□□ -1.43
NPC1L1Q9UHC9 AK3P4-201ENST00000504283 583 ntBASIC6.14□□□□□ -1.43
NPC1L1Q9UHC9 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC6.14□□□□□ -1.43
NPC1L1Q9UHC9 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC6.14□□□□□ -1.43
NPC1L1Q9UHC9 AC009643.1-201ENST00000532030 391 ntBASIC6.14□□□□□ -1.43
NPC1L1Q9UHC9 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
NPC1L1Q9UHC9 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC6.14□□□□□ -1.43
NPC1L1Q9UHC9 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC6.14□□□□□ -1.43
NPC1L1Q9UHC9 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC6.14□□□□□ -1.43
NPC1L1Q9UHC9 AC091178.1-203ENST00000584586 279 ntBASIC6.14□□□□□ -1.43
NPC1L1Q9UHC9 AC020915.5-201ENST00000596836 964 ntBASIC6.14□□□□□ -1.43
NPC1L1Q9UHC9 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC6.14□□□□□ -1.43
NPC1L1Q9UHC9 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
NPC1L1Q9UHC9 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC6.14□□□□□ -1.43
NPC1L1Q9UHC9 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
NPC1L1Q9UHC9 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
NPC1L1Q9UHC9 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
NPC1L1Q9UHC9 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
NPC1L1Q9UHC9 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
NPC1L1Q9UHC9 AL137100.1-201ENST00000556703 1620 ntBASIC6.13□□□□□ -1.43
NPC1L1Q9UHC9 GVINP1-202ENST00000531871 7271 ntBASIC6.13□□□□□ -1.43
NPC1L1Q9UHC9 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
NPC1L1Q9UHC9 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC6.13□□□□□ -1.43
NPC1L1Q9UHC9 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC6.13□□□□□ -1.43
NPC1L1Q9UHC9 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
NPC1L1Q9UHC9 RPL23AP59-201ENST00000399415 461 ntBASIC6.13□□□□□ -1.43
NPC1L1Q9UHC9 RPL7AP25-201ENST00000423357 805 ntBASIC6.13□□□□□ -1.43
NPC1L1Q9UHC9 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC6.13□□□□□ -1.43
NPC1L1Q9UHC9 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC6.13□□□□□ -1.43
NPC1L1Q9UHC9 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC6.13□□□□□ -1.43
NPC1L1Q9UHC9 NAP1L4P3-201ENST00000432820 1147 ntBASIC6.13□□□□□ -1.43
NPC1L1Q9UHC9 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC6.13□□□□□ -1.43
NPC1L1Q9UHC9 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC6.13□□□□□ -1.43
NPC1L1Q9UHC9 AC114495.1-201ENST00000441274 436 ntBASIC6.13□□□□□ -1.43
NPC1L1Q9UHC9 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
NPC1L1Q9UHC9 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
NPC1L1Q9UHC9 RN7SKP46-201ENST00000515942 234 ntBASIC6.13□□□□□ -1.43
NPC1L1Q9UHC9 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
NPC1L1Q9UHC9 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC6.13□□□□□ -1.43
NPC1L1Q9UHC9 AC021483.2-201ENST00000567415 758 ntBASIC6.13□□□□□ -1.43
NPC1L1Q9UHC9 RPL23AP97-201ENST00000568955 471 ntBASIC6.13□□□□□ -1.43
NPC1L1Q9UHC9 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC6.13□□□□□ -1.43
NPC1L1Q9UHC9 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC6.13□□□□□ -1.43
NPC1L1Q9UHC9 AC020910.2-201ENST00000603635 610 ntBASIC6.13□□□□□ -1.43
NPC1L1Q9UHC9 AC005191.1-201ENST00000603950 358 ntBASIC6.13□□□□□ -1.43
NPC1L1Q9UHC9 AL137246.1-201ENST00000607072 977 ntBASIC6.13□□□□□ -1.43
NPC1L1Q9UHC9 IPO5-229ENST00000631030 192 ntTSL 5 BASIC6.13□□□□□ -1.43
NPC1L1Q9UHC9 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC6.13□□□□□ -1.43
NPC1L1Q9UHC9 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms