Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.79□□□□□ -1.64
CISHQ9NSE2 AC027455.1-201ENST00000574104 594 ntBASIC4.79□□□□□ -1.64
CISHQ9NSE2 RN7SL52P-201ENST00000584271 284 ntBASIC4.79□□□□□ -1.64
CISHQ9NSE2 RPL12P25-202ENST00000598100 674 ntBASIC4.79□□□□□ -1.64
CISHQ9NSE2 OR51C1P-201ENST00000608504 942 ntBASIC4.79□□□□□ -1.64
CISHQ9NSE2 RN7SL722P-201ENST00000617780 284 ntBASIC4.79□□□□□ -1.64
CISHQ9NSE2 RN7SL565P-201ENST00000618246 284 ntBASIC4.79□□□□□ -1.64
CISHQ9NSE2 AC140113.4-201ENST00000622087 222 ntBASIC4.79□□□□□ -1.64
CISHQ9NSE2 AP000346.3-201ENST00000622821 210 ntBASIC4.79□□□□□ -1.64
CISHQ9NSE2 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.79□□□□□ -1.64
CISHQ9NSE2 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CISHQ9NSE2 EOGT-210ENST00000615922 1931 ntBASIC4.79□□□□□ -1.64
CISHQ9NSE2 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC4.79□□□□□ -1.64
CISHQ9NSE2 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
CISHQ9NSE2 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.79□□□□□ -1.64
CISHQ9NSE2 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
CISHQ9NSE2 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
CISHQ9NSE2 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CISHQ9NSE2 OR51H2P-202ENST00000641424 3046 ntBASIC4.78□□□□□ -1.64
CISHQ9NSE2 AC093591.2-201ENST00000565254 3843 ntBASIC4.78□□□□□ -1.64
CISHQ9NSE2 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CISHQ9NSE2 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CISHQ9NSE2 AC120338.1-201ENST00000625074 1541 ntBASIC4.78□□□□□ -1.64
CISHQ9NSE2 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CISHQ9NSE2 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CISHQ9NSE2 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CISHQ9NSE2 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.78□□□□□ -1.64
CISHQ9NSE2 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CISHQ9NSE2 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CISHQ9NSE2 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC4.78□□□□□ -1.64
CISHQ9NSE2 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
CISHQ9NSE2 MTHFD2P5-201ENST00000320415 844 ntBASIC4.78□□□□□ -1.64
CISHQ9NSE2 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC4.78□□□□□ -1.64
CISHQ9NSE2 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CISHQ9NSE2 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.78□□□□□ -1.64
CISHQ9NSE2 AL445213.1-201ENST00000412589 747 ntBASIC4.78□□□□□ -1.64
CISHQ9NSE2 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.78□□□□□ -1.64
CISHQ9NSE2 RPL23AP25-201ENST00000430973 463 ntBASIC4.78□□□□□ -1.64
CISHQ9NSE2 NDUFA12P1-201ENST00000455914 406 ntBASIC4.78□□□□□ -1.64
CISHQ9NSE2 RPL21P126-201ENST00000470049 478 ntBASIC4.78□□□□□ -1.64
CISHQ9NSE2 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.78□□□□□ -1.64
CISHQ9NSE2 AK3P4-201ENST00000504283 583 ntBASIC4.78□□□□□ -1.64
CISHQ9NSE2 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CISHQ9NSE2 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC4.78□□□□□ -1.64
CISHQ9NSE2 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.78□□□□□ -1.64
CISHQ9NSE2 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CISHQ9NSE2 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC4.78□□□□□ -1.64
CISHQ9NSE2 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.78□□□□□ -1.64
CISHQ9NSE2 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC4.78□□□□□ -1.64
CISHQ9NSE2 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.78□□□□□ -1.64
CISHQ9NSE2 ATP5J2P6-201ENST00000565203 266 ntBASIC4.78□□□□□ -1.64
CISHQ9NSE2 AC020915.5-201ENST00000596836 964 ntBASIC4.78□□□□□ -1.64
CISHQ9NSE2 MIR6891-201ENST00000618788 93 ntBASIC4.78□□□□□ -1.64
CISHQ9NSE2 AP005019.3-201ENST00000620418 560 ntBASIC4.78□□□□□ -1.64
CISHQ9NSE2 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
CISHQ9NSE2 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CISHQ9NSE2 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
CISHQ9NSE2 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CISHQ9NSE2 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.78□□□□□ -1.64
CISHQ9NSE2 MAPK10-320ENST00000641462 6696 ntBASIC4.78□□□□□ -1.64
CISHQ9NSE2 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CISHQ9NSE2 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.77□□□□□ -1.65
CISHQ9NSE2 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CISHQ9NSE2 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.77□□□□□ -1.65
CISHQ9NSE2 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.77□□□□□ -1.65
CISHQ9NSE2 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC4.77□□□□□ -1.65
CISHQ9NSE2 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CISHQ9NSE2 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
CISHQ9NSE2 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.77□□□□□ -1.65
CISHQ9NSE2 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
CISHQ9NSE2 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC4.77□□□□□ -1.65
CISHQ9NSE2 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.77□□□□□ -1.65
CISHQ9NSE2 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CISHQ9NSE2 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC4.77□□□□□ -1.65
CISHQ9NSE2 MIR195-201ENST00000385194 87 ntBASIC4.77□□□□□ -1.65
CISHQ9NSE2 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CISHQ9NSE2 SNRPFP1-201ENST00000414761 252 ntBASIC4.77□□□□□ -1.65
CISHQ9NSE2 AC062016.2-201ENST00000420950 676 ntBASIC4.77□□□□□ -1.65
CISHQ9NSE2 ARAFP1-201ENST00000422172 605 ntBASIC4.77□□□□□ -1.65
CISHQ9NSE2 CENPIP1-201ENST00000425713 902 ntBASIC4.77□□□□□ -1.65
CISHQ9NSE2 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.77□□□□□ -1.65
CISHQ9NSE2 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.77□□□□□ -1.65
CISHQ9NSE2 CDY14P-201ENST00000431260 1014 ntBASIC4.77□□□□□ -1.65
CISHQ9NSE2 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC4.77□□□□□ -1.65
CISHQ9NSE2 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.77□□□□□ -1.65
CISHQ9NSE2 CDY12P-201ENST00000440679 1015 ntBASIC4.77□□□□□ -1.65
CISHQ9NSE2 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.77□□□□□ -1.65
CISHQ9NSE2 CDY13P-201ENST00000445813 1015 ntBASIC4.77□□□□□ -1.65
CISHQ9NSE2 CDY23P-201ENST00000451661 1014 ntBASIC4.77□□□□□ -1.65
CISHQ9NSE2 RPS27AP17-201ENST00000463344 455 ntBASIC4.77□□□□□ -1.65
CISHQ9NSE2 RN7SL738P-201ENST00000470264 297 ntBASIC4.77□□□□□ -1.65
CISHQ9NSE2 RPL23AP65-201ENST00000475608 468 ntBASIC4.77□□□□□ -1.65
CISHQ9NSE2 OR11I1P-201ENST00000486033 954 ntBASIC4.77□□□□□ -1.65
CISHQ9NSE2 AC108022.1-201ENST00000493466 478 ntBASIC4.77□□□□□ -1.65
CISHQ9NSE2 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC4.77□□□□□ -1.65
CISHQ9NSE2 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.77□□□□□ -1.65
CISHQ9NSE2 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.77□□□□□ -1.65
CISHQ9NSE2 MIR4330-201ENST00000579077 105 ntBASIC4.77□□□□□ -1.65
CISHQ9NSE2 AC107993.1-201ENST00000591343 684 ntBASIC4.77□□□□□ -1.65
CISHQ9NSE2 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 140.7 ms