Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC6.31□□□□□ -1.4
SSU72Q9NP77 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC6.31□□□□□ -1.4
SSU72Q9NP77 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC6.31□□□□□ -1.4
SSU72Q9NP77 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC6.31□□□□□ -1.4
SSU72Q9NP77 MIR378C-201ENST00000578683 81 ntBASIC6.31□□□□□ -1.4
SSU72Q9NP77 MEMO1P5-201ENST00000604810 406 ntBASIC6.31□□□□□ -1.4
SSU72Q9NP77 AC131902.3-201ENST00000611767 581 ntBASIC6.31□□□□□ -1.4
SSU72Q9NP77 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC6.31□□□□□ -1.4
SSU72Q9NP77 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC6.31□□□□□ -1.4
SSU72Q9NP77 MIR6863-201ENST00000636112 90 ntBASIC6.31□□□□□ -1.4
SSU72Q9NP77 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SSU72Q9NP77 AC025470.1-201ENST00000510053 2032 ntBASIC6.31□□□□□ -1.4
SSU72Q9NP77 AC006026.1-201ENST00000444025 1803 ntBASIC6.31□□□□□ -1.4
SSU72Q9NP77 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
SSU72Q9NP77 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SSU72Q9NP77 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.31□□□□□ -1.4
SSU72Q9NP77 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SSU72Q9NP77 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SSU72Q9NP77 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SSU72Q9NP77 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SSU72Q9NP77 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
SSU72Q9NP77 AL049634.1-201ENST00000453770 1720 ntBASIC6.3□□□□□ -1.4
SSU72Q9NP77 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6.3□□□□□ -1.4
SSU72Q9NP77 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.3□□□□□ -1.4
SSU72Q9NP77 ATP10D-203ENST00000504445 2550 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SSU72Q9NP77 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SSU72Q9NP77 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC6.3□□□□□ -1.4
SSU72Q9NP77 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SSU72Q9NP77 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC6.3□□□□□ -1.4
SSU72Q9NP77 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SSU72Q9NP77 AL121768.1-201ENST00000613917 2544 ntBASIC6.3□□□□□ -1.4
SSU72Q9NP77 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SSU72Q9NP77 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC6.3□□□□□ -1.4
SSU72Q9NP77 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SSU72Q9NP77 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SSU72Q9NP77 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
SSU72Q9NP77 OR4F16-201ENST00000332831 995 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
SSU72Q9NP77 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
SSU72Q9NP77 AC245036.1-201ENST00000391727 309 ntBASIC6.3□□□□□ -1.4
SSU72Q9NP77 MTCO3P40-201ENST00000392516 676 ntBASIC6.3□□□□□ -1.4
SSU72Q9NP77 RPL23AP47-201ENST00000408017 460 ntBASIC6.3□□□□□ -1.4
SSU72Q9NP77 LSM5-205ENST00000409952 687 ntTSL 4 BASIC6.3□□□□□ -1.4
SSU72Q9NP77 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC6.3□□□□□ -1.4
SSU72Q9NP77 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.3□□□□□ -1.4
SSU72Q9NP77 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC6.3□□□□□ -1.4
SSU72Q9NP77 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC6.3□□□□□ -1.4
SSU72Q9NP77 AL390866.1-201ENST00000425137 469 ntTSL 5 BASIC6.3□□□□□ -1.4
SSU72Q9NP77 OR4F29-201ENST00000426406 995 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
SSU72Q9NP77 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC6.3□□□□□ -1.4
SSU72Q9NP77 AL590399.2-201ENST00000427536 309 ntBASIC6.3□□□□□ -1.4
SSU72Q9NP77 SKP1P3-201ENST00000429280 487 ntBASIC6.3□□□□□ -1.4
SSU72Q9NP77 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC6.3□□□□□ -1.4
SSU72Q9NP77 VDAC1P6-201ENST00000430062 855 ntBASIC6.3□□□□□ -1.4
SSU72Q9NP77 PUDPP2-201ENST00000431423 643 ntBASIC6.3□□□□□ -1.4
SSU72Q9NP77 MRPS21P3-201ENST00000436696 262 ntBASIC6.3□□□□□ -1.4
SSU72Q9NP77 AC083855.1-201ENST00000440041 258 ntBASIC6.3□□□□□ -1.4
SSU72Q9NP77 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SSU72Q9NP77 OR4F3-201ENST00000456475 995 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
SSU72Q9NP77 RPS16P9-201ENST00000477220 427 ntBASIC6.3□□□□□ -1.4
SSU72Q9NP77 AC018475.1-201ENST00000478358 465 ntBASIC6.3□□□□□ -1.4
SSU72Q9NP77 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC6.3□□□□□ -1.4
SSU72Q9NP77 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC6.3□□□□□ -1.4
SSU72Q9NP77 AC009269.1-203ENST00000496414 828 ntTSL 2 BASIC6.3□□□□□ -1.4
SSU72Q9NP77 RNF138P1-201ENST00000502765 546 ntBASIC6.3□□□□□ -1.4
SSU72Q9NP77 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC6.3□□□□□ -1.4
SSU72Q9NP77 ARL4AP2-201ENST00000507378 601 ntBASIC6.3□□□□□ -1.4
SSU72Q9NP77 Z99943.2-201ENST00000507585 266 ntBASIC6.3□□□□□ -1.4
SSU72Q9NP77 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC6.3□□□□□ -1.4
SSU72Q9NP77 RNU6-430P-201ENST00000517078 107 ntBASIC6.3□□□□□ -1.4
SSU72Q9NP77 PAICSP4-201ENST00000517543 1253 ntBASIC6.3□□□□□ -1.4
SSU72Q9NP77 AP005639.2-201ENST00000527592 928 ntBASIC6.3□□□□□ -1.4
SSU72Q9NP77 OR4A45P-201ENST00000529954 901 ntBASIC6.3□□□□□ -1.4
SSU72Q9NP77 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SSU72Q9NP77 AC123904.3-201ENST00000547218 814 ntBASIC6.3□□□□□ -1.4
SSU72Q9NP77 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC6.3□□□□□ -1.4
SSU72Q9NP77 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC6.3□□□□□ -1.4
SSU72Q9NP77 AL049779.3-201ENST00000557141 606 ntBASIC6.3□□□□□ -1.4
SSU72Q9NP77 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC6.3□□□□□ -1.4
SSU72Q9NP77 AC136475.10-201ENST00000620253 385 ntBASIC6.3□□□□□ -1.4
SSU72Q9NP77 AL359880.1-201ENST00000621879 266 ntBASIC6.3□□□□□ -1.4
SSU72Q9NP77 ABBA01000935.2-201ENST00000637477 838 ntBASIC6.3□□□□□ -1.4
SSU72Q9NP77 CRYM-AS1-204ENST00000637983 556 ntBASIC6.3□□□□□ -1.4
SSU72Q9NP77 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
SSU72Q9NP77 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SSU72Q9NP77 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SSU72Q9NP77 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
SSU72Q9NP77 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC6.3□□□□□ -1.4
SSU72Q9NP77 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SSU72Q9NP77 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC6.3□□□□□ -1.4
SSU72Q9NP77 AL355488.2-201ENST00000609909 2850 ntBASIC6.3□□□□□ -1.4
SSU72Q9NP77 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC6.3□□□□□ -1.4
SSU72Q9NP77 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SSU72Q9NP77 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
SSU72Q9NP77 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC6.3□□□□□ -1.4
SSU72Q9NP77 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC6.3□□□□□ -1.4
SSU72Q9NP77 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
SSU72Q9NP77 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC6.29□□□□□ -1.4
SSU72Q9NP77 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC6.29□□□□□ -1.4
SSU72Q9NP77 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.29□□□□□ -1.4
SSU72Q9NP77 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms