Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 AC108751.2-201ENST00000469993 231 ntBASIC4.86□□□□□ -1.63
LRRC40Q9H9A6 STRADBP1-201ENST00000478954 1281 ntBASIC4.86□□□□□ -1.63
LRRC40Q9H9A6 GAPDHP56-201ENST00000506031 988 ntBASIC4.86□□□□□ -1.63
LRRC40Q9H9A6 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.86□□□□□ -1.63
LRRC40Q9H9A6 RNA5SP464-201ENST00000516251 108 ntBASIC4.86□□□□□ -1.63
LRRC40Q9H9A6 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.86□□□□□ -1.63
LRRC40Q9H9A6 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.86□□□□□ -1.63
LRRC40Q9H9A6 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC4.86□□□□□ -1.63
LRRC40Q9H9A6 AC084033.1-201ENST00000550830 633 ntBASIC4.86□□□□□ -1.63
LRRC40Q9H9A6 AC093249.4-201ENST00000564755 259 ntBASIC4.86□□□□□ -1.63
LRRC40Q9H9A6 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.86□□□□□ -1.63
LRRC40Q9H9A6 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC4.86□□□□□ -1.63
LRRC40Q9H9A6 AC092159.4-201ENST00000624944 550 ntBASIC4.86□□□□□ -1.63
LRRC40Q9H9A6 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.86□□□□□ -1.63
LRRC40Q9H9A6 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
LRRC40Q9H9A6 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
LRRC40Q9H9A6 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.86□□□□□ -1.63
LRRC40Q9H9A6 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
LRRC40Q9H9A6 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.86□□□□□ -1.63
LRRC40Q9H9A6 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.86□□□□□ -1.63
LRRC40Q9H9A6 HSPD1P11-201ENST00000508643 1702 ntBASIC4.86□□□□□ -1.63
LRRC40Q9H9A6 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
LRRC40Q9H9A6 CASC19-284ENST00000642142 1868 ntBASIC4.86□□□□□ -1.63
LRRC40Q9H9A6 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.85□□□□□ -1.63
LRRC40Q9H9A6 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
LRRC40Q9H9A6 AP000756.2-201ENST00000624168 2567 ntBASIC4.85□□□□□ -1.63
LRRC40Q9H9A6 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.85□□□□□ -1.63
LRRC40Q9H9A6 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
LRRC40Q9H9A6 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
LRRC40Q9H9A6 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
LRRC40Q9H9A6 MAPK10-349ENST00000641767 3661 ntBASIC4.85□□□□□ -1.63
LRRC40Q9H9A6 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.85□□□□□ -1.63
LRRC40Q9H9A6 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
LRRC40Q9H9A6 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
LRRC40Q9H9A6 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
LRRC40Q9H9A6 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
LRRC40Q9H9A6 ARL4AP5-201ENST00000404372 599 ntBASIC4.85□□□□□ -1.63
LRRC40Q9H9A6 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
LRRC40Q9H9A6 CASKP1-201ENST00000412870 582 ntBASIC4.85□□□□□ -1.63
LRRC40Q9H9A6 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.85□□□□□ -1.63
LRRC40Q9H9A6 AL590806.1-201ENST00000415818 853 ntBASIC4.85□□□□□ -1.63
LRRC40Q9H9A6 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.85□□□□□ -1.63
LRRC40Q9H9A6 BX510359.3-201ENST00000422168 306 ntBASIC4.85□□□□□ -1.63
LRRC40Q9H9A6 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC4.85□□□□□ -1.63
LRRC40Q9H9A6 RPS26P47-201ENST00000427219 348 ntBASIC4.85□□□□□ -1.63
LRRC40Q9H9A6 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.85□□□□□ -1.63
LRRC40Q9H9A6 RBMY2QP-201ENST00000429799 1147 ntBASIC4.85□□□□□ -1.63
LRRC40Q9H9A6 TMX2P1-201ENST00000436507 708 ntBASIC4.85□□□□□ -1.63
LRRC40Q9H9A6 PA2G4P6-201ENST00000438325 1197 ntBASIC4.85□□□□□ -1.63
LRRC40Q9H9A6 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.85□□□□□ -1.63
LRRC40Q9H9A6 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.85□□□□□ -1.63
LRRC40Q9H9A6 AL157884.3-201ENST00000448273 1184 ntBASIC4.85□□□□□ -1.63
LRRC40Q9H9A6 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.85□□□□□ -1.63
LRRC40Q9H9A6 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.85□□□□□ -1.63
LRRC40Q9H9A6 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC4.85□□□□□ -1.63
LRRC40Q9H9A6 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.85□□□□□ -1.63
LRRC40Q9H9A6 GCSHP4-201ENST00000538792 439 ntBASIC4.85□□□□□ -1.63
LRRC40Q9H9A6 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.85□□□□□ -1.63
LRRC40Q9H9A6 FKBP1BP1-201ENST00000553366 325 ntBASIC4.85□□□□□ -1.63
LRRC40Q9H9A6 RN7SL802P-201ENST00000577858 299 ntBASIC4.85□□□□□ -1.63
LRRC40Q9H9A6 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.85□□□□□ -1.63
LRRC40Q9H9A6 AC011487.3-201ENST00000593607 453 ntBASIC4.85□□□□□ -1.63
LRRC40Q9H9A6 BMS1P7-201ENST00000602440 1052 ntBASIC4.85□□□□□ -1.63
LRRC40Q9H9A6 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC4.85□□□□□ -1.63
LRRC40Q9H9A6 AC011815.3-201ENST00000624194 473 ntBASIC4.85□□□□□ -1.63
LRRC40Q9H9A6 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
LRRC40Q9H9A6 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
LRRC40Q9H9A6 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
LRRC40Q9H9A6 AC009313.2-201ENST00000417893 1941 ntBASIC4.85□□□□□ -1.63
LRRC40Q9H9A6 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.85□□□□□ -1.63
LRRC40Q9H9A6 INTS6P1-201ENST00000504674 2530 ntBASIC4.85□□□□□ -1.63
LRRC40Q9H9A6 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
LRRC40Q9H9A6 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.85□□□□□ -1.63
LRRC40Q9H9A6 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
LRRC40Q9H9A6 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.84□□□□□ -1.63
LRRC40Q9H9A6 ZFRP1-201ENST00000457579 2970 ntBASIC4.84□□□□□ -1.63
LRRC40Q9H9A6 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
LRRC40Q9H9A6 AC087565.3-202ENST00000642085 1603 ntBASIC4.84□□□□□ -1.63
LRRC40Q9H9A6 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC4.84□□□□□ -1.63
LRRC40Q9H9A6 U3.30-201ENST00000391308 210 ntBASIC4.84□□□□□ -1.63
LRRC40Q9H9A6 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.84□□□□□ -1.63
LRRC40Q9H9A6 MIR1178-201ENST00000408396 91 ntBASIC4.84□□□□□ -1.63
LRRC40Q9H9A6 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.84□□□□□ -1.63
LRRC40Q9H9A6 AC006065.1-201ENST00000422539 802 ntBASIC4.84□□□□□ -1.63
LRRC40Q9H9A6 RPS27P18-201ENST00000431701 247 ntBASIC4.84□□□□□ -1.63
LRRC40Q9H9A6 AC104651.2-201ENST00000447549 528 ntBASIC4.84□□□□□ -1.63
LRRC40Q9H9A6 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.84□□□□□ -1.63
LRRC40Q9H9A6 AURKAPS2-201ENST00000454983 333 ntBASIC4.84□□□□□ -1.63
LRRC40Q9H9A6 snoU13.20-201ENST00000459180 104 ntBASIC4.84□□□□□ -1.63
LRRC40Q9H9A6 AC021205.1-201ENST00000468797 348 ntBASIC4.84□□□□□ -1.63
LRRC40Q9H9A6 RPL21P6-201ENST00000479171 504 ntBASIC4.84□□□□□ -1.63
LRRC40Q9H9A6 AC147055.1-201ENST00000509261 750 ntBASIC4.84□□□□□ -1.63
LRRC40Q9H9A6 RNU1-6P-201ENST00000516290 144 ntBASIC4.84□□□□□ -1.63
LRRC40Q9H9A6 MORF4L1P3-201ENST00000525966 950 ntBASIC4.84□□□□□ -1.63
LRRC40Q9H9A6 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
LRRC40Q9H9A6 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.84□□□□□ -1.63
LRRC40Q9H9A6 AC133555.2-201ENST00000550213 292 ntBASIC4.84□□□□□ -1.63
LRRC40Q9H9A6 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.84□□□□□ -1.63
LRRC40Q9H9A6 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC4.84□□□□□ -1.63
LRRC40Q9H9A6 MIR5699-201ENST00000578903 90 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms