Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
ABCA3Q99758 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC5.92□□□□□ -1.46
ABCA3Q99758 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
ABCA3Q99758 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
ABCA3Q99758 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
ABCA3Q99758 RNU1-14P-201ENST00000362759 152 ntBASIC5.91□□□□□ -1.46
ABCA3Q99758 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC5.91□□□□□ -1.46
ABCA3Q99758 YME1L1P1-201ENST00000429435 297 ntBASIC5.91□□□□□ -1.46
ABCA3Q99758 RPS27AP17-201ENST00000463344 455 ntBASIC5.91□□□□□ -1.46
ABCA3Q99758 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
ABCA3Q99758 MYL12BP2-201ENST00000503948 512 ntBASIC5.91□□□□□ -1.46
ABCA3Q99758 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC5.91□□□□□ -1.46
ABCA3Q99758 MTND4LP31-201ENST00000514859 294 ntBASIC5.91□□□□□ -1.46
ABCA3Q99758 AC105031.1-201ENST00000518550 476 ntBASIC5.91□□□□□ -1.46
ABCA3Q99758 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC5.91□□□□□ -1.46
ABCA3Q99758 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC5.91□□□□□ -1.46
ABCA3Q99758 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC5.91□□□□□ -1.46
ABCA3Q99758 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
ABCA3Q99758 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
ABCA3Q99758 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
ABCA3Q99758 KCNMA1-203ENST00000354353 5732 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
ABCA3Q99758 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC5.91□□□□□ -1.46
ABCA3Q99758 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
ABCA3Q99758 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
ABCA3Q99758 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
ABCA3Q99758 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
ABCA3Q99758 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
ABCA3Q99758 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
ABCA3Q99758 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
ABCA3Q99758 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC5.91□□□□□ -1.46
ABCA3Q99758 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC5.91□□□□□ -1.46
ABCA3Q99758 RPL7P2-201ENST00000427639 268 ntBASIC5.91□□□□□ -1.46
ABCA3Q99758 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC5.91□□□□□ -1.46
ABCA3Q99758 AC006499.6-201ENST00000511169 607 ntBASIC5.91□□□□□ -1.46
ABCA3Q99758 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC5.91□□□□□ -1.46
ABCA3Q99758 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC5.91□□□□□ -1.46
ABCA3Q99758 TMEM30CP-203ENST00000637814 1035 ntBASIC5.91□□□□□ -1.46
ABCA3Q99758 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.9□□□□□ -1.46
ABCA3Q99758 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
ABCA3Q99758 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.9□□□□□ -1.46
ABCA3Q99758 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.9□□□□□ -1.46
ABCA3Q99758 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC5.9□□□□□ -1.46
ABCA3Q99758 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
ABCA3Q99758 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
ABCA3Q99758 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
ABCA3Q99758 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC5.9□□□□□ -1.47
ABCA3Q99758 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
ABCA3Q99758 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
ABCA3Q99758 CGA-201ENST00000369582 729 ntTSL 5 BASIC5.9□□□□□ -1.47
ABCA3Q99758 RNU1-63P-201ENST00000383902 164 ntBASIC5.9□□□□□ -1.47
ABCA3Q99758 RNU11-201ENST00000387069 134 ntBASIC5.9□□□□□ -1.47
ABCA3Q99758 SNORA74C-2-201ENST00000411179 201 ntBASIC5.9□□□□□ -1.47
ABCA3Q99758 TPT1P2-201ENST00000413105 503 ntBASIC5.9□□□□□ -1.47
ABCA3Q99758 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC5.9□□□□□ -1.47
ABCA3Q99758 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC5.9□□□□□ -1.47
ABCA3Q99758 AC021660.1-201ENST00000465006 554 ntBASIC5.9□□□□□ -1.47
ABCA3Q99758 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
ABCA3Q99758 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.9□□□□□ -1.47
ABCA3Q99758 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC5.9□□□□□ -1.47
ABCA3Q99758 AL360012.1-201ENST00000602813 131 ntBASIC5.9□□□□□ -1.47
ABCA3Q99758 AC023762.1-201ENST00000603280 584 ntBASIC5.9□□□□□ -1.47
ABCA3Q99758 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.9□□□□□ -1.47
ABCA3Q99758 AC243756.2-201ENST00000618406 463 ntBASIC5.9□□□□□ -1.47
ABCA3Q99758 TEX41-256ENST00000626411 368 ntTSL 5 BASIC5.9□□□□□ -1.47
ABCA3Q99758 TEX41-300ENST00000631048 69 ntTSL 5 BASIC5.9□□□□□ -1.47
ABCA3Q99758 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC5.9□□□□□ -1.47
ABCA3Q99758 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.47
ABCA3Q99758 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC5.9□□□□□ -1.47
ABCA3Q99758 AL390036.1-202ENST00000634635 2439 ntTSL 5 BASIC5.9□□□□□ -1.47
ABCA3Q99758 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
ABCA3Q99758 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.89□□□□□ -1.47
ABCA3Q99758 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
ABCA3Q99758 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
ABCA3Q99758 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
ABCA3Q99758 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
ABCA3Q99758 OFD1P5Y-201ENST00000447585 2590 ntBASIC5.89□□□□□ -1.47
ABCA3Q99758 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
ABCA3Q99758 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC5.89□□□□□ -1.47
ABCA3Q99758 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.89□□□□□ -1.47
ABCA3Q99758 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
ABCA3Q99758 EIF4HP2-201ENST00000424380 563 ntBASIC5.89□□□□□ -1.47
ABCA3Q99758 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC5.89□□□□□ -1.47
ABCA3Q99758 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
ABCA3Q99758 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
ABCA3Q99758 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC5.89□□□□□ -1.47
ABCA3Q99758 RNA5SP116-201ENST00000516132 98 ntBASIC5.89□□□□□ -1.47
ABCA3Q99758 OR5BC1P-201ENST00000529327 739 ntBASIC5.89□□□□□ -1.47
ABCA3Q99758 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC5.89□□□□□ -1.47
ABCA3Q99758 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.89□□□□□ -1.47
ABCA3Q99758 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
ABCA3Q99758 FAM27D1-201ENST00000612308 341 ntBASIC5.89□□□□□ -1.47
ABCA3Q99758 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
ABCA3Q99758 AC008013.2-202ENST00000637965 364 ntBASIC5.89□□□□□ -1.47
ABCA3Q99758 LINC01808-202ENST00000641680 1116 ntBASIC5.89□□□□□ -1.47
ABCA3Q99758 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
ABCA3Q99758 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
ABCA3Q99758 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
ABCA3Q99758 AP000641.1-201ENST00000531988 1639 ntBASIC5.89□□□□□ -1.47
ABCA3Q99758 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
ABCA3Q99758 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms