Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 AC127526.2-201ENST00000426436 775 ntBASIC7.14□□□□□ -1.27
NPAS3Q8IXF0 NANOGP4-201ENST00000427230 913 ntBASIC7.14□□□□□ -1.27
NPAS3Q8IXF0 LINC00184-201ENST00000429269 2270 ntTSL 2 BASIC7.14□□□□□ -1.27
NPAS3Q8IXF0 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC7.14□□□□□ -1.27
NPAS3Q8IXF0 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC7.14□□□□□ -1.27
NPAS3Q8IXF0 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
NPAS3Q8IXF0 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC7.14□□□□□ -1.27
NPAS3Q8IXF0 NMD3P1-201ENST00000439704 1488 ntBASIC7.14□□□□□ -1.27
NPAS3Q8IXF0 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC7.14□□□□□ -1.27
NPAS3Q8IXF0 AC007383.1-201ENST00000445875 636 ntBASIC7.14□□□□□ -1.27
NPAS3Q8IXF0 HMGN1P36-201ENST00000446623 298 ntBASIC7.14□□□□□ -1.27
NPAS3Q8IXF0 TMEM72-AS1-201ENST00000450287 3300 ntTSL 2 BASIC7.14□□□□□ -1.27
NPAS3Q8IXF0 MEMO1P4-201ENST00000453590 386 ntBASIC7.14□□□□□ -1.27
NPAS3Q8IXF0 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
NPAS3Q8IXF0 APOOP2-201ENST00000461561 539 ntBASIC7.14□□□□□ -1.27
NPAS3Q8IXF0 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC7.14□□□□□ -1.27
NPAS3Q8IXF0 EPHA6-204ENST00000502694 1582 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
NPAS3Q8IXF0 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC7.14□□□□□ -1.27
NPAS3Q8IXF0 HMGB3P15-201ENST00000507326 574 ntBASIC7.14□□□□□ -1.27
NPAS3Q8IXF0 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC7.14□□□□□ -1.27
NPAS3Q8IXF0 AC009812.2-201ENST00000517657 457 ntBASIC7.14□□□□□ -1.27
NPAS3Q8IXF0 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC7.14□□□□□ -1.27
NPAS3Q8IXF0 CA1-215ENST00000522389 551 ntTSL 3 BASIC7.14□□□□□ -1.27
NPAS3Q8IXF0 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC7.14□□□□□ -1.27
NPAS3Q8IXF0 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC7.14□□□□□ -1.27
NPAS3Q8IXF0 AL845331.3-202ENST00000562856 261 ntBASIC7.14□□□□□ -1.27
NPAS3Q8IXF0 MIR3154-201ENST00000577829 84 ntBASIC7.14□□□□□ -1.27
NPAS3Q8IXF0 MIR3135A-201ENST00000578460 77 ntBASIC7.14□□□□□ -1.27
NPAS3Q8IXF0 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC7.14□□□□□ -1.27
NPAS3Q8IXF0 AC020914.7-201ENST00000594477 545 ntBASIC7.14□□□□□ -1.27
NPAS3Q8IXF0 AL499605.1-201ENST00000604628 403 ntBASIC7.14□□□□□ -1.27
NPAS3Q8IXF0 AL590032.1-201ENST00000604920 252 ntBASIC7.14□□□□□ -1.27
NPAS3Q8IXF0 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC7.14□□□□□ -1.27
NPAS3Q8IXF0 AC129778.1-202ENST00000623812 261 ntBASIC7.14□□□□□ -1.27
NPAS3Q8IXF0 AC073593.1-201ENST00000624500 411 ntBASIC7.14□□□□□ -1.27
NPAS3Q8IXF0 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
NPAS3Q8IXF0 AL591379.1-207ENST00000635982 261 ntBASIC7.14□□□□□ -1.27
NPAS3Q8IXF0 AMYH02020865.1-205ENST00000636189 261 ntBASIC7.14□□□□□ -1.27
NPAS3Q8IXF0 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC7.14□□□□□ -1.27
NPAS3Q8IXF0 FAR2P1-201ENST00000325390 3679 ntTSL 5 BASIC7.14□□□□□ -1.27
NPAS3Q8IXF0 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
NPAS3Q8IXF0 ZG16-201ENST00000400752 3132 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
NPAS3Q8IXF0 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
NPAS3Q8IXF0 GDPD4-202ENST00000376217 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
NPAS3Q8IXF0 AMOT-202ENST00000371958 2462 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
NPAS3Q8IXF0 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC7.13□□□□□ -1.27
NPAS3Q8IXF0 CFI-201ENST00000394634 2159 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
NPAS3Q8IXF0 SENP8-201ENST00000340912 4281 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
NPAS3Q8IXF0 FAM49B-226ENST00000523509 1968 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
NPAS3Q8IXF0 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
NPAS3Q8IXF0 CNTNAP4-206ENST00000478060 3708 ntTSL 5 BASIC7.13□□□□□ -1.27
NPAS3Q8IXF0 GPCPD1-201ENST00000379019 5489 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
NPAS3Q8IXF0 FARSBP1-201ENST00000435808 1778 ntBASIC7.13□□□□□ -1.27
NPAS3Q8IXF0 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
NPAS3Q8IXF0 BRDT-202ENST00000362005 3409 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
NPAS3Q8IXF0 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC7.13□□□□□ -1.27
NPAS3Q8IXF0 SP140-205ENST00000420434 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
NPAS3Q8IXF0 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
NPAS3Q8IXF0 MAPK10-380ENST00000642015 3137 ntAPPRIS P2 BASIC7.13□□□□□ -1.27
NPAS3Q8IXF0 AL121949.2-201ENST00000403446 1548 ntBASIC7.13□□□□□ -1.27
NPAS3Q8IXF0 AC032011.1-201ENST00000611703 1549 ntBASIC7.13□□□□□ -1.27
NPAS3Q8IXF0 RNF217-AS1-201ENST00000439075 4507 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
NPAS3Q8IXF0 AC100871.1-201ENST00000507871 1456 ntBASIC7.13□□□□□ -1.27
NPAS3Q8IXF0 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC7.13□□□□□ -1.27
NPAS3Q8IXF0 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
NPAS3Q8IXF0 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
NPAS3Q8IXF0 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
NPAS3Q8IXF0 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
NPAS3Q8IXF0 ODF3-202ENST00000342593 386 ntTSL 5 BASIC7.13□□□□□ -1.27
NPAS3Q8IXF0 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
NPAS3Q8IXF0 RPA3-203ENST00000401447 414 ntTSL 3 BASIC7.13□□□□□ -1.27
NPAS3Q8IXF0 AL592114.1-201ENST00000403842 483 ntBASIC7.13□□□□□ -1.27
NPAS3Q8IXF0 RN7SKP86-201ENST00000410454 332 ntBASIC7.13□□□□□ -1.27
NPAS3Q8IXF0 RNU6-1148P-201ENST00000410992 104 ntBASIC7.13□□□□□ -1.27
NPAS3Q8IXF0 ATP6V1G1P7-201ENST00000415853 349 ntBASIC7.13□□□□□ -1.27
NPAS3Q8IXF0 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC7.13□□□□□ -1.27
NPAS3Q8IXF0 FAM96AP1-201ENST00000430879 482 ntBASIC7.13□□□□□ -1.27
NPAS3Q8IXF0 AC097359.1-201ENST00000447946 463 ntBASIC7.13□□□□□ -1.27
NPAS3Q8IXF0 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC7.13□□□□□ -1.27
NPAS3Q8IXF0 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC7.13□□□□□ -1.27
NPAS3Q8IXF0 ACTG1P13-201ENST00000486987 1043 ntBASIC7.13□□□□□ -1.27
NPAS3Q8IXF0 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC7.13□□□□□ -1.27
NPAS3Q8IXF0 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC7.13□□□□□ -1.27
NPAS3Q8IXF0 SMURF2P1-201ENST00000514992 481 ntBASIC7.13□□□□□ -1.27
NPAS3Q8IXF0 RNU4-49P-201ENST00000516080 140 ntBASIC7.13□□□□□ -1.27
NPAS3Q8IXF0 RNU6-764P-201ENST00000516396 105 ntBASIC7.13□□□□□ -1.27
NPAS3Q8IXF0 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC7.13□□□□□ -1.27
NPAS3Q8IXF0 AC087808.1-201ENST00000520501 361 ntBASIC7.13□□□□□ -1.27
NPAS3Q8IXF0 AC140063.1-201ENST00000541343 259 ntBASIC7.13□□□□□ -1.27
NPAS3Q8IXF0 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC7.13□□□□□ -1.27
NPAS3Q8IXF0 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC7.13□□□□□ -1.27
NPAS3Q8IXF0 AP005202.2-201ENST00000582386 658 ntTSL 3 BASIC7.13□□□□□ -1.27
NPAS3Q8IXF0 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC7.13□□□□□ -1.27
NPAS3Q8IXF0 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC7.13□□□□□ -1.27
NPAS3Q8IXF0 TSHZ2-203ENST00000603338 3803 ntTSL 2 BASIC7.13□□□□□ -1.27
NPAS3Q8IXF0 HNRNPA3P9-201ENST00000604913 979 ntBASIC7.13□□□□□ -1.27
NPAS3Q8IXF0 AC011891.2-201ENST00000604949 397 ntBASIC7.13□□□□□ -1.27
NPAS3Q8IXF0 AL035410.2-201ENST00000604963 864 ntBASIC7.13□□□□□ -1.27
NPAS3Q8IXF0 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC7.13□□□□□ -1.27
NPAS3Q8IXF0 AP005137.2-201ENST00000609238 400 ntBASIC7.13□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms