Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
NHLRC1Q6VVB1 ASNSP1-201ENST00000518311 1939 ntBASIC4.62□□□□□ -1.67
NHLRC1Q6VVB1 PCAT14-202ENST00000627127 3935 ntBASIC4.62□□□□□ -1.67
NHLRC1Q6VVB1 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.62□□□□□ -1.67
NHLRC1Q6VVB1 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.62□□□□□ -1.67
NHLRC1Q6VVB1 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
NHLRC1Q6VVB1 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
NHLRC1Q6VVB1 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
NHLRC1Q6VVB1 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.61□□□□□ -1.67
NHLRC1Q6VVB1 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
NHLRC1Q6VVB1 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
NHLRC1Q6VVB1 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC4.61□□□□□ -1.67
NHLRC1Q6VVB1 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.61□□□□□ -1.67
NHLRC1Q6VVB1 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
NHLRC1Q6VVB1 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
NHLRC1Q6VVB1 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
NHLRC1Q6VVB1 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.61□□□□□ -1.67
NHLRC1Q6VVB1 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
NHLRC1Q6VVB1 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
NHLRC1Q6VVB1 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
NHLRC1Q6VVB1 RNU6-609P-201ENST00000365459 107 ntBASIC4.61□□□□□ -1.67
NHLRC1Q6VVB1 OR52E6-202ENST00000379946 954 ntBASIC4.61□□□□□ -1.67
NHLRC1Q6VVB1 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
NHLRC1Q6VVB1 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
NHLRC1Q6VVB1 MIR1286-201ENST00000408112 78 ntBASIC4.61□□□□□ -1.67
NHLRC1Q6VVB1 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.61□□□□□ -1.67
NHLRC1Q6VVB1 MARK2P12-201ENST00000420129 585 ntBASIC4.61□□□□□ -1.67
NHLRC1Q6VVB1 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC4.61□□□□□ -1.67
NHLRC1Q6VVB1 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC4.61□□□□□ -1.67
NHLRC1Q6VVB1 EIF2S2P3-201ENST00000428356 999 ntBASIC4.61□□□□□ -1.67
NHLRC1Q6VVB1 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.61□□□□□ -1.67
NHLRC1Q6VVB1 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC4.61□□□□□ -1.67
NHLRC1Q6VVB1 FTH1P16-201ENST00000435241 552 ntBASIC4.61□□□□□ -1.67
NHLRC1Q6VVB1 GAPDHP58-201ENST00000438477 1006 ntBASIC4.61□□□□□ -1.67
NHLRC1Q6VVB1 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.61□□□□□ -1.67
NHLRC1Q6VVB1 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC4.61□□□□□ -1.67
NHLRC1Q6VVB1 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC4.61□□□□□ -1.67
NHLRC1Q6VVB1 RNA5SP103-201ENST00000459503 118 ntBASIC4.61□□□□□ -1.67
NHLRC1Q6VVB1 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC4.61□□□□□ -1.67
NHLRC1Q6VVB1 AC097173.1-201ENST00000505862 819 ntBASIC4.61□□□□□ -1.67
NHLRC1Q6VVB1 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC4.61□□□□□ -1.67
NHLRC1Q6VVB1 AC027338.1-201ENST00000514840 825 ntBASIC4.61□□□□□ -1.67
NHLRC1Q6VVB1 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC4.61□□□□□ -1.67
NHLRC1Q6VVB1 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
NHLRC1Q6VVB1 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC4.61□□□□□ -1.67
NHLRC1Q6VVB1 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
NHLRC1Q6VVB1 AC093510.2-201ENST00000562820 896 ntBASIC4.61□□□□□ -1.67
NHLRC1Q6VVB1 MIR4443-201ENST00000585052 53 ntBASIC4.61□□□□□ -1.67
NHLRC1Q6VVB1 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC4.61□□□□□ -1.67
NHLRC1Q6VVB1 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC4.61□□□□□ -1.67
NHLRC1Q6VVB1 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC4.61□□□□□ -1.67
NHLRC1Q6VVB1 AP000864.1-201ENST00000609424 650 ntBASIC4.61□□□□□ -1.67
NHLRC1Q6VVB1 AL445493.3-201ENST00000619568 477 ntBASIC4.61□□□□□ -1.67
NHLRC1Q6VVB1 WWOX-217ENST00000620008 450 ntTSL 2 BASIC4.61□□□□□ -1.67
NHLRC1Q6VVB1 AC116563.2-201ENST00000624751 535 ntBASIC4.61□□□□□ -1.67
NHLRC1Q6VVB1 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.61□□□□□ -1.67
NHLRC1Q6VVB1 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.61□□□□□ -1.67
NHLRC1Q6VVB1 AC135068.12-201ENST00000637370 931 ntBASIC4.61□□□□□ -1.67
NHLRC1Q6VVB1 AC073869.10-201ENST00000642016 354 ntBASIC4.61□□□□□ -1.67
NHLRC1Q6VVB1 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.61□□□□□ -1.67
NHLRC1Q6VVB1 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
NHLRC1Q6VVB1 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
NHLRC1Q6VVB1 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.61□□□□□ -1.67
NHLRC1Q6VVB1 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.61□□□□□ -1.67
NHLRC1Q6VVB1 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
NHLRC1Q6VVB1 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
NHLRC1Q6VVB1 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
NHLRC1Q6VVB1 AC011447.7-201ENST00000624228 1590 ntBASIC4.61□□□□□ -1.67
NHLRC1Q6VVB1 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
NHLRC1Q6VVB1 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
NHLRC1Q6VVB1 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
NHLRC1Q6VVB1 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.6□□□□□ -1.67
NHLRC1Q6VVB1 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.6□□□□□ -1.67
NHLRC1Q6VVB1 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.6□□□□□ -1.67
NHLRC1Q6VVB1 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.6□□□□□ -1.67
NHLRC1Q6VVB1 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
NHLRC1Q6VVB1 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.6□□□□□ -1.67
NHLRC1Q6VVB1 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
NHLRC1Q6VVB1 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
NHLRC1Q6VVB1 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
NHLRC1Q6VVB1 DUTP5-201ENST00000406790 469 ntBASIC4.6□□□□□ -1.67
NHLRC1Q6VVB1 U3.32-201ENST00000408116 212 ntBASIC4.6□□□□□ -1.67
NHLRC1Q6VVB1 Z68694.1-201ENST00000413929 841 ntBASIC4.6□□□□□ -1.67
NHLRC1Q6VVB1 LINC01347-201ENST00000417964 355 ntBASIC4.6□□□□□ -1.67
NHLRC1Q6VVB1 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC4.6□□□□□ -1.67
NHLRC1Q6VVB1 RPL12P34-201ENST00000424532 479 ntBASIC4.6□□□□□ -1.67
NHLRC1Q6VVB1 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC4.6□□□□□ -1.67
NHLRC1Q6VVB1 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.6□□□□□ -1.67
NHLRC1Q6VVB1 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC4.6□□□□□ -1.67
NHLRC1Q6VVB1 RPS29P10-201ENST00000439197 166 ntBASIC4.6□□□□□ -1.67
NHLRC1Q6VVB1 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC4.6□□□□□ -1.67
NHLRC1Q6VVB1 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC4.6□□□□□ -1.67
NHLRC1Q6VVB1 AC069540.1-201ENST00000446320 988 ntBASIC4.6□□□□□ -1.67
NHLRC1Q6VVB1 CYCSP42-201ENST00000450823 238 ntBASIC4.6□□□□□ -1.67
NHLRC1Q6VVB1 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC4.6□□□□□ -1.67
NHLRC1Q6VVB1 BX284632.1-201ENST00000478218 541 ntBASIC4.6□□□□□ -1.67
NHLRC1Q6VVB1 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.6□□□□□ -1.67
NHLRC1Q6VVB1 AC005412.2-201ENST00000492004 341 ntBASIC4.6□□□□□ -1.67
NHLRC1Q6VVB1 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
NHLRC1Q6VVB1 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms