Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.69□□□□□ -1.66
C11orf88Q6PI97 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.69□□□□□ -1.66
C11orf88Q6PI97 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
C11orf88Q6PI97 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
C11orf88Q6PI97 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC4.69□□□□□ -1.66
C11orf88Q6PI97 AMELX-201ENST00000348912 737 ntTSL 5 BASIC4.69□□□□□ -1.66
C11orf88Q6PI97 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
C11orf88Q6PI97 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
C11orf88Q6PI97 AC005522.1-201ENST00000395416 346 ntBASIC4.69□□□□□ -1.66
C11orf88Q6PI97 HNRNPDP2-201ENST00000406475 478 ntBASIC4.69□□□□□ -1.66
C11orf88Q6PI97 AC004987.3-201ENST00000413879 771 ntBASIC4.69□□□□□ -1.66
C11orf88Q6PI97 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC4.69□□□□□ -1.66
C11orf88Q6PI97 RPL7AP49-201ENST00000429522 581 ntBASIC4.69□□□□□ -1.66
C11orf88Q6PI97 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.69□□□□□ -1.66
C11orf88Q6PI97 AL591438.1-201ENST00000433508 581 ntBASIC4.69□□□□□ -1.66
C11orf88Q6PI97 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.69□□□□□ -1.66
C11orf88Q6PI97 CYCSP24-201ENST00000445119 316 ntBASIC4.69□□□□□ -1.66
C11orf88Q6PI97 AC073909.1-201ENST00000447112 999 ntBASIC4.69□□□□□ -1.66
C11orf88Q6PI97 AC023141.9-201ENST00000458734 412 ntBASIC4.69□□□□□ -1.66
C11orf88Q6PI97 RNA5SP103-201ENST00000459503 118 ntBASIC4.69□□□□□ -1.66
C11orf88Q6PI97 UBFD1P1-201ENST00000473259 814 ntBASIC4.69□□□□□ -1.66
C11orf88Q6PI97 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC4.69□□□□□ -1.66
C11orf88Q6PI97 RPL7L1P13-201ENST00000511702 739 ntBASIC4.69□□□□□ -1.66
C11orf88Q6PI97 EIF3KP3-201ENST00000514461 639 ntBASIC4.69□□□□□ -1.66
C11orf88Q6PI97 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.69□□□□□ -1.66
C11orf88Q6PI97 CDC42P3-201ENST00000518493 633 ntBASIC4.69□□□□□ -1.66
C11orf88Q6PI97 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC4.69□□□□□ -1.66
C11orf88Q6PI97 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC4.69□□□□□ -1.66
C11orf88Q6PI97 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
C11orf88Q6PI97 AC139103.1-201ENST00000534696 1030 ntBASIC4.69□□□□□ -1.66
C11orf88Q6PI97 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
C11orf88Q6PI97 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC4.69□□□□□ -1.66
C11orf88Q6PI97 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC4.69□□□□□ -1.66
C11orf88Q6PI97 AC006530.1-201ENST00000555980 571 ntBASIC4.69□□□□□ -1.66
C11orf88Q6PI97 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC4.69□□□□□ -1.66
C11orf88Q6PI97 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC4.69□□□□□ -1.66
C11orf88Q6PI97 AC233280.2-201ENST00000603917 1070 ntBASIC4.69□□□□□ -1.66
C11orf88Q6PI97 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC4.69□□□□□ -1.66
C11orf88Q6PI97 RMST_10.1-201ENST00000616309 154 ntBASIC4.69□□□□□ -1.66
C11orf88Q6PI97 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC4.69□□□□□ -1.66
C11orf88Q6PI97 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.69□□□□□ -1.66
C11orf88Q6PI97 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC4.69□□□□□ -1.66
C11orf88Q6PI97 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
C11orf88Q6PI97 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC4.69□□□□□ -1.66
C11orf88Q6PI97 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
C11orf88Q6PI97 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC4.69□□□□□ -1.66
C11orf88Q6PI97 AC022893.2-201ENST00000564832 3296 ntBASIC4.69□□□□□ -1.66
C11orf88Q6PI97 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
C11orf88Q6PI97 OR55B1P-203ENST00000641518 2602 ntBASIC4.69□□□□□ -1.66
C11orf88Q6PI97 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.69□□□□□ -1.66
C11orf88Q6PI97 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC4.69□□□□□ -1.66
C11orf88Q6PI97 AC100871.1-201ENST00000507871 1456 ntBASIC4.69□□□□□ -1.66
C11orf88Q6PI97 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.68□□□□□ -1.66
C11orf88Q6PI97 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
C11orf88Q6PI97 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
C11orf88Q6PI97 AC063976.2-201ENST00000425667 3556 ntBASIC4.68□□□□□ -1.66
C11orf88Q6PI97 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
C11orf88Q6PI97 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.68□□□□□ -1.66
C11orf88Q6PI97 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.68□□□□□ -1.66
C11orf88Q6PI97 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
C11orf88Q6PI97 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.68□□□□□ -1.66
C11orf88Q6PI97 MIR16-2-201ENST00000362117 81 ntBASIC4.68□□□□□ -1.66
C11orf88Q6PI97 RNA5SP27-201ENST00000363839 119 ntBASIC4.68□□□□□ -1.66
C11orf88Q6PI97 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC4.68□□□□□ -1.66
C11orf88Q6PI97 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC4.68□□□□□ -1.66
C11orf88Q6PI97 MIR130A-201ENST00000385274 89 ntBASIC4.68□□□□□ -1.66
C11orf88Q6PI97 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC4.68□□□□□ -1.66
C11orf88Q6PI97 RN7SKP229-201ENST00000410465 302 ntBASIC4.68□□□□□ -1.66
C11orf88Q6PI97 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC4.68□□□□□ -1.66
C11orf88Q6PI97 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC4.68□□□□□ -1.66
C11orf88Q6PI97 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC4.68□□□□□ -1.66
C11orf88Q6PI97 AC093155.2-201ENST00000420734 937 ntBASIC4.68□□□□□ -1.66
C11orf88Q6PI97 AL022331.1-201ENST00000429025 477 ntBASIC4.68□□□□□ -1.66
C11orf88Q6PI97 AC090018.1-201ENST00000434369 367 ntBASIC4.68□□□□□ -1.66
C11orf88Q6PI97 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC4.68□□□□□ -1.66
C11orf88Q6PI97 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC4.68□□□□□ -1.66
C11orf88Q6PI97 PRPF38AP1-201ENST00000451976 933 ntBASIC4.68□□□□□ -1.66
C11orf88Q6PI97 YWHAEP1-201ENST00000453697 763 ntBASIC4.68□□□□□ -1.66
C11orf88Q6PI97 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.68□□□□□ -1.66
C11orf88Q6PI97 AC021660.1-201ENST00000465006 554 ntBASIC4.68□□□□□ -1.66
C11orf88Q6PI97 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC4.68□□□□□ -1.66
C11orf88Q6PI97 RPS24P16-201ENST00000497294 392 ntBASIC4.68□□□□□ -1.66
C11orf88Q6PI97 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC4.68□□□□□ -1.66
C11orf88Q6PI97 AC110792.2-201ENST00000510278 224 ntBASIC4.68□□□□□ -1.66
C11orf88Q6PI97 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC4.68□□□□□ -1.66
C11orf88Q6PI97 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC4.68□□□□□ -1.66
C11orf88Q6PI97 AC092709.1-201ENST00000521355 1045 ntBASIC4.68□□□□□ -1.66
C11orf88Q6PI97 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC4.68□□□□□ -1.66
C11orf88Q6PI97 C1DP5-201ENST00000525775 383 ntBASIC4.68□□□□□ -1.66
C11orf88Q6PI97 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.68□□□□□ -1.66
C11orf88Q6PI97 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC4.68□□□□□ -1.66
C11orf88Q6PI97 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC4.68□□□□□ -1.66
C11orf88Q6PI97 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
C11orf88Q6PI97 MTCYBP13-201ENST00000578634 1093 ntBASIC4.68□□□□□ -1.66
C11orf88Q6PI97 MIR3936-201ENST00000584304 110 ntBASIC4.68□□□□□ -1.66
C11orf88Q6PI97 HMGB2P1-201ENST00000591146 634 ntBASIC4.68□□□□□ -1.66
C11orf88Q6PI97 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
C11orf88Q6PI97 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
C11orf88Q6PI97 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
C11orf88Q6PI97 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms