Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 RN7SL172P-201ENST00000460535 303 ntBASIC4.38□□□□□ -1.71
RFX4Q33E94 AC016687.1-201ENST00000482574 353 ntBASIC4.38□□□□□ -1.71
RFX4Q33E94 RN7SL214P-201ENST00000487317 265 ntBASIC4.38□□□□□ -1.71
RFX4Q33E94 AC072052.1-201ENST00000496556 306 ntBASIC4.38□□□□□ -1.71
RFX4Q33E94 AC025445.1-201ENST00000502728 300 ntBASIC4.38□□□□□ -1.71
RFX4Q33E94 AK4P6-201ENST00000505168 528 ntBASIC4.38□□□□□ -1.71
RFX4Q33E94 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC4.38□□□□□ -1.71
RFX4Q33E94 PPBPP1-201ENST00000510807 373 ntBASIC4.38□□□□□ -1.71
RFX4Q33E94 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC4.38□□□□□ -1.71
RFX4Q33E94 AC008694.2-201ENST00000517591 306 ntBASIC4.38□□□□□ -1.71
RFX4Q33E94 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
RFX4Q33E94 AP001804.2-201ENST00000533932 910 ntBASIC4.38□□□□□ -1.71
RFX4Q33E94 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.38□□□□□ -1.71
RFX4Q33E94 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC4.38□□□□□ -1.71
RFX4Q33E94 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.38□□□□□ -1.71
RFX4Q33E94 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC4.38□□□□□ -1.71
RFX4Q33E94 VN1R81P-201ENST00000602085 372 ntBASIC4.38□□□□□ -1.71
RFX4Q33E94 AL627230.1-201ENST00000613077 211 ntBASIC4.38□□□□□ -1.71
RFX4Q33E94 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.38□□□□□ -1.71
RFX4Q33E94 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.38□□□□□ -1.71
RFX4Q33E94 AL591926.8-201ENST00000616876 211 ntBASIC4.38□□□□□ -1.71
RFX4Q33E94 AC131238.1-201ENST00000617135 328 ntBASIC4.38□□□□□ -1.71
RFX4Q33E94 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RFX4Q33E94 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
RFX4Q33E94 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
RFX4Q33E94 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.38□□□□□ -1.71
RFX4Q33E94 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.38□□□□□ -1.71
RFX4Q33E94 AL355852.1-201ENST00000454081 1771 ntBASIC4.37□□□□□ -1.71
RFX4Q33E94 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.37□□□□□ -1.71
RFX4Q33E94 PABPC1P6-201ENST00000445594 1829 ntBASIC4.37□□□□□ -1.71
RFX4Q33E94 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
RFX4Q33E94 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC4.37□□□□□ -1.71
RFX4Q33E94 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RFX4Q33E94 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RFX4Q33E94 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RFX4Q33E94 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
RFX4Q33E94 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RFX4Q33E94 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RFX4Q33E94 OR52B1P-201ENST00000316506 909 ntBASIC4.37□□□□□ -1.71
RFX4Q33E94 MIR448-201ENST00000362131 111 ntBASIC4.37□□□□□ -1.71
RFX4Q33E94 RNA5SP428-201ENST00000365129 132 ntBASIC4.37□□□□□ -1.71
RFX4Q33E94 RNA5SP455-201ENST00000365190 119 ntBASIC4.37□□□□□ -1.71
RFX4Q33E94 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.37□□□□□ -1.71
RFX4Q33E94 MIR223-201ENST00000385204 110 ntBASIC4.37□□□□□ -1.71
RFX4Q33E94 BMS1P13-201ENST00000417301 885 ntBASIC4.37□□□□□ -1.71
RFX4Q33E94 UBTFL3-201ENST00000418934 1024 ntBASIC4.37□□□□□ -1.71
RFX4Q33E94 AC079355.1-201ENST00000421770 223 ntBASIC4.37□□□□□ -1.71
RFX4Q33E94 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.37□□□□□ -1.71
RFX4Q33E94 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.37□□□□□ -1.71
RFX4Q33E94 HMGB3P10-201ENST00000434734 572 ntBASIC4.37□□□□□ -1.71
RFX4Q33E94 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RFX4Q33E94 AL137845.2-201ENST00000444292 988 ntBASIC4.37□□□□□ -1.71
RFX4Q33E94 AL163193.1-201ENST00000444895 788 ntBASIC4.37□□□□□ -1.71
RFX4Q33E94 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.37□□□□□ -1.71
RFX4Q33E94 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC4.37□□□□□ -1.71
RFX4Q33E94 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.37□□□□□ -1.71
RFX4Q33E94 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC4.37□□□□□ -1.71
RFX4Q33E94 UBTFL6-201ENST00000477929 1024 ntBASIC4.37□□□□□ -1.71
RFX4Q33E94 RN7SL319P-201ENST00000480656 221 ntBASIC4.37□□□□□ -1.71
RFX4Q33E94 RN7SL30P-201ENST00000488416 306 ntBASIC4.37□□□□□ -1.71
RFX4Q33E94 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RFX4Q33E94 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.37□□□□□ -1.71
RFX4Q33E94 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.37□□□□□ -1.71
RFX4Q33E94 CCNHP1-201ENST00000513311 678 ntBASIC4.37□□□□□ -1.71
RFX4Q33E94 RNA5SP446-201ENST00000515955 82 ntBASIC4.37□□□□□ -1.71
RFX4Q33E94 BMPR1APS2-201ENST00000527904 1012 ntBASIC4.37□□□□□ -1.71
RFX4Q33E94 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC4.37□□□□□ -1.71
RFX4Q33E94 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RFX4Q33E94 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.37□□□□□ -1.71
RFX4Q33E94 AC069240.1-201ENST00000548774 375 ntBASIC4.37□□□□□ -1.71
RFX4Q33E94 AL049839.1-201ENST00000556151 657 ntBASIC4.37□□□□□ -1.71
RFX4Q33E94 MIR3176-201ENST00000582210 90 ntBASIC4.37□□□□□ -1.71
RFX4Q33E94 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.37□□□□□ -1.71
RFX4Q33E94 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RFX4Q33E94 AL713998.2-201ENST00000604538 1198 ntBASIC4.37□□□□□ -1.71
RFX4Q33E94 AL353726.1-201ENST00000614041 1000 ntBASIC4.37□□□□□ -1.71
RFX4Q33E94 AC004808.2-201ENST00000627965 773 ntBASIC4.37□□□□□ -1.71
RFX4Q33E94 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.37□□□□□ -1.71
RFX4Q33E94 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
RFX4Q33E94 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.37□□□□□ -1.71
RFX4Q33E94 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
RFX4Q33E94 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.36□□□□□ -1.71
RFX4Q33E94 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RFX4Q33E94 DDX18P3-201ENST00000404856 2007 ntBASIC4.36□□□□□ -1.71
RFX4Q33E94 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.36□□□□□ -1.71
RFX4Q33E94 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RFX4Q33E94 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.36□□□□□ -1.71
RFX4Q33E94 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.36□□□□□ -1.71
RFX4Q33E94 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
RFX4Q33E94 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
RFX4Q33E94 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RFX4Q33E94 GSTM3P2-201ENST00000412746 530 ntBASIC4.36□□□□□ -1.71
RFX4Q33E94 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC4.36□□□□□ -1.71
RFX4Q33E94 LINC00993-201ENST00000420453 540 ntBASIC4.36□□□□□ -1.71
RFX4Q33E94 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC4.36□□□□□ -1.71
RFX4Q33E94 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC4.36□□□□□ -1.71
RFX4Q33E94 RPL21P91-201ENST00000429231 479 ntBASIC4.36□□□□□ -1.71
RFX4Q33E94 PPIAP20-201ENST00000449839 135 ntBASIC4.36□□□□□ -1.71
RFX4Q33E94 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.36□□□□□ -1.71
RFX4Q33E94 AC079841.1-201ENST00000481228 950 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms