Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC5.66□□□□□ -1.5
PDS5AQ29RF7 AC068993.1-201ENST00000546724 589 ntBASIC5.66□□□□□ -1.5
PDS5AQ29RF7 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC5.66□□□□□ -1.5
PDS5AQ29RF7 CYCSP40-201ENST00000575927 294 ntBASIC5.66□□□□□ -1.5
PDS5AQ29RF7 RPL12P25-202ENST00000598100 674 ntBASIC5.66□□□□□ -1.5
PDS5AQ29RF7 OR8G7P-201ENST00000616658 848 ntBASIC5.66□□□□□ -1.5
PDS5AQ29RF7 AC015914.2-201ENST00000618167 288 ntBASIC5.66□□□□□ -1.5
PDS5AQ29RF7 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.66□□□□□ -1.5
PDS5AQ29RF7 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PDS5AQ29RF7 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PDS5AQ29RF7 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
PDS5AQ29RF7 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
PDS5AQ29RF7 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.66□□□□□ -1.5
PDS5AQ29RF7 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
PDS5AQ29RF7 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
PDS5AQ29RF7 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC5.65□□□□□ -1.5
PDS5AQ29RF7 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.65□□□□□ -1.5
PDS5AQ29RF7 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
PDS5AQ29RF7 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.65□□□□□ -1.5
PDS5AQ29RF7 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
PDS5AQ29RF7 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.65□□□□□ -1.5
PDS5AQ29RF7 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC5.65□□□□□ -1.51
PDS5AQ29RF7 AC126755.2-208ENST00000327792 462 ntBASIC5.65□□□□□ -1.51
PDS5AQ29RF7 AC138969.1-213ENST00000331436 462 ntBASIC5.65□□□□□ -1.51
PDS5AQ29RF7 SNORA71.2-201ENST00000364941 134 ntBASIC5.65□□□□□ -1.51
PDS5AQ29RF7 EI24P3-201ENST00000399046 1062 ntBASIC5.65□□□□□ -1.51
PDS5AQ29RF7 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.65□□□□□ -1.51
PDS5AQ29RF7 RPEP3-201ENST00000425462 676 ntBASIC5.65□□□□□ -1.51
PDS5AQ29RF7 MTCO1P57-201ENST00000432182 261 ntBASIC5.65□□□□□ -1.51
PDS5AQ29RF7 AC104651.2-201ENST00000447549 528 ntBASIC5.65□□□□□ -1.51
PDS5AQ29RF7 SCARNA10-201ENST00000459255 330 ntBASIC5.65□□□□□ -1.51
PDS5AQ29RF7 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
PDS5AQ29RF7 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC5.65□□□□□ -1.51
PDS5AQ29RF7 RNU6-513P-201ENST00000516104 104 ntBASIC5.65□□□□□ -1.51
PDS5AQ29RF7 MTND1P36-201ENST00000522384 936 ntBASIC5.65□□□□□ -1.51
PDS5AQ29RF7 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
PDS5AQ29RF7 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.65□□□□□ -1.51
PDS5AQ29RF7 AC093765.1-201ENST00000603758 881 ntBASIC5.65□□□□□ -1.51
PDS5AQ29RF7 AC005191.1-201ENST00000603950 358 ntBASIC5.65□□□□□ -1.51
PDS5AQ29RF7 AC117490.2-201ENST00000610042 594 ntBASIC5.65□□□□□ -1.51
PDS5AQ29RF7 AC100847.1-201ENST00000611316 481 ntBASIC5.65□□□□□ -1.51
PDS5AQ29RF7 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
PDS5AQ29RF7 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.51
PDS5AQ29RF7 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
PDS5AQ29RF7 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
PDS5AQ29RF7 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.64□□□□□ -1.51
PDS5AQ29RF7 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
PDS5AQ29RF7 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
PDS5AQ29RF7 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PDS5AQ29RF7 AC093849.1-201ENST00000563631 2209 ntBASIC5.64□□□□□ -1.51
PDS5AQ29RF7 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
PDS5AQ29RF7 AC090220.1-201ENST00000593078 1699 ntBASIC5.64□□□□□ -1.51
PDS5AQ29RF7 AL137100.1-201ENST00000556703 1620 ntBASIC5.64□□□□□ -1.51
PDS5AQ29RF7 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PDS5AQ29RF7 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
PDS5AQ29RF7 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.64□□□□□ -1.51
PDS5AQ29RF7 OR51C1P-202ENST00000641159 1444 ntBASIC5.64□□□□□ -1.51
PDS5AQ29RF7 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PDS5AQ29RF7 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PDS5AQ29RF7 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
PDS5AQ29RF7 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.64□□□□□ -1.51
PDS5AQ29RF7 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
PDS5AQ29RF7 Z98745.1-201ENST00000402553 494 ntBASIC5.64□□□□□ -1.51
PDS5AQ29RF7 RAB28P1-201ENST00000411517 641 ntBASIC5.64□□□□□ -1.51
PDS5AQ29RF7 AC006065.1-201ENST00000422539 802 ntBASIC5.64□□□□□ -1.51
PDS5AQ29RF7 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC5.64□□□□□ -1.51
PDS5AQ29RF7 RPL12P28-201ENST00000430852 489 ntBASIC5.64□□□□□ -1.51
PDS5AQ29RF7 AC016712.1-201ENST00000431088 378 ntBASIC5.64□□□□□ -1.51
PDS5AQ29RF7 CCNB1IP1P2-201ENST00000432876 818 ntBASIC5.64□□□□□ -1.51
PDS5AQ29RF7 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC5.64□□□□□ -1.51
PDS5AQ29RF7 MTCO3P43-201ENST00000440974 771 ntBASIC5.64□□□□□ -1.51
PDS5AQ29RF7 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC5.64□□□□□ -1.51
PDS5AQ29RF7 MRPL48P1-201ENST00000445390 636 ntBASIC5.64□□□□□ -1.51
PDS5AQ29RF7 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC5.64□□□□□ -1.51
PDS5AQ29RF7 RHEBP2-201ENST00000450289 600 ntBASIC5.64□□□□□ -1.51
PDS5AQ29RF7 OR52Y1P-201ENST00000452418 828 ntBASIC5.64□□□□□ -1.51
PDS5AQ29RF7 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC5.64□□□□□ -1.51
PDS5AQ29RF7 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC5.64□□□□□ -1.51
PDS5AQ29RF7 AC069304.1-201ENST00000491593 704 ntBASIC5.64□□□□□ -1.51
PDS5AQ29RF7 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC5.64□□□□□ -1.51
PDS5AQ29RF7 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.64□□□□□ -1.51
PDS5AQ29RF7 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC5.64□□□□□ -1.51
PDS5AQ29RF7 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC5.64□□□□□ -1.51
PDS5AQ29RF7 AP000827.1-201ENST00000527814 258 ntBASIC5.64□□□□□ -1.51
PDS5AQ29RF7 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.64□□□□□ -1.51
PDS5AQ29RF7 AP001781.1-201ENST00000530977 207 ntBASIC5.64□□□□□ -1.51
PDS5AQ29RF7 AC025423.2-201ENST00000537570 439 ntBASIC5.64□□□□□ -1.51
PDS5AQ29RF7 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.64□□□□□ -1.51
PDS5AQ29RF7 AC084783.1-201ENST00000565846 910 ntBASIC5.64□□□□□ -1.51
PDS5AQ29RF7 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.64□□□□□ -1.51
PDS5AQ29RF7 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC5.64□□□□□ -1.51
PDS5AQ29RF7 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC5.64□□□□□ -1.51
PDS5AQ29RF7 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
PDS5AQ29RF7 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
PDS5AQ29RF7 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
PDS5AQ29RF7 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
PDS5AQ29RF7 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
PDS5AQ29RF7 THAP12P8-201ENST00000447914 2115 ntBASIC5.64□□□□□ -1.51
PDS5AQ29RF7 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PDS5AQ29RF7 TCP1P3-201ENST00000414406 1498 ntBASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms