Protein–RNA interactions for Protein: P60608

ERVFC1-1, Endogenous retrovirus group FC1 member 1 Env polyprotein, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1-1P60608 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC4.36□□□□□ -1.71
ERVFC1-1P60608 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC4.36□□□□□ -1.71
ERVFC1-1P60608 OR5AM1P-201ENST00000532136 1032 ntBASIC4.36□□□□□ -1.71
ERVFC1-1P60608 AC022882.1-201ENST00000532142 501 ntBASIC4.36□□□□□ -1.71
ERVFC1-1P60608 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
ERVFC1-1P60608 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
ERVFC1-1P60608 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC4.36□□□□□ -1.71
ERVFC1-1P60608 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.36□□□□□ -1.71
ERVFC1-1P60608 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.36□□□□□ -1.71
ERVFC1-1P60608 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC4.36□□□□□ -1.71
ERVFC1-1P60608 AL358913.1-201ENST00000554342 121 ntBASIC4.36□□□□□ -1.71
ERVFC1-1P60608 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC4.36□□□□□ -1.71
ERVFC1-1P60608 AC090888.1-201ENST00000561335 1141 ntBASIC4.36□□□□□ -1.71
ERVFC1-1P60608 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC4.36□□□□□ -1.71
ERVFC1-1P60608 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC4.36□□□□□ -1.71
ERVFC1-1P60608 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC4.36□□□□□ -1.71
ERVFC1-1P60608 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC4.36□□□□□ -1.71
ERVFC1-1P60608 AL354943.1-201ENST00000572103 781 ntBASIC4.36□□□□□ -1.71
ERVFC1-1P60608 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC4.36□□□□□ -1.71
ERVFC1-1P60608 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC4.36□□□□□ -1.71
ERVFC1-1P60608 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC4.36□□□□□ -1.71
ERVFC1-1P60608 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC4.36□□□□□ -1.71
ERVFC1-1P60608 MTCO2P22-201ENST00000603246 681 ntBASIC4.36□□□□□ -1.71
ERVFC1-1P60608 AC233280.2-201ENST00000603917 1070 ntBASIC4.36□□□□□ -1.71
ERVFC1-1P60608 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC4.36□□□□□ -1.71
ERVFC1-1P60608 AP000255.1-201ENST00000610276 676 ntBASIC4.36□□□□□ -1.71
ERVFC1-1P60608 VIS1.1-201ENST00000610517 203 ntBASIC4.36□□□□□ -1.71
ERVFC1-1P60608 PACRG-210ENST00000611387 279 ntTSL 5 BASIC4.36□□□□□ -1.71
ERVFC1-1P60608 AL450489.1-201ENST00000612071 468 ntBASIC4.36□□□□□ -1.71
ERVFC1-1P60608 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC4.36□□□□□ -1.71
ERVFC1-1P60608 AC024257.5-201ENST00000612739 531 ntBASIC4.36□□□□□ -1.71
ERVFC1-1P60608 MIR6071-201ENST00000616741 78 ntBASIC4.36□□□□□ -1.71
ERVFC1-1P60608 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC4.36□□□□□ -1.71
ERVFC1-1P60608 AL603755.1-201ENST00000619504 163 ntBASIC4.36□□□□□ -1.71
ERVFC1-1P60608 AP003497.2-201ENST00000624220 967 ntBASIC4.36□□□□□ -1.71
ERVFC1-1P60608 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
ERVFC1-1P60608 LINC01355-201ENST00000566551 5444 ntBASIC4.36□□□□□ -1.71
ERVFC1-1P60608 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.36□□□□□ -1.71
ERVFC1-1P60608 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
ERVFC1-1P60608 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
ERVFC1-1P60608 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
ERVFC1-1P60608 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
ERVFC1-1P60608 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
ERVFC1-1P60608 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC4.36□□□□□ -1.71
ERVFC1-1P60608 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC4.36□□□□□ -1.71
ERVFC1-1P60608 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC4.36□□□□□ -1.71
ERVFC1-1P60608 AL133268.1-201ENST00000405676 1401 ntBASIC4.36□□□□□ -1.71
ERVFC1-1P60608 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
ERVFC1-1P60608 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
ERVFC1-1P60608 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC4.36□□□□□ -1.71
ERVFC1-1P60608 MAPK6PS2-201ENST00000379571 2060 ntBASIC4.36□□□□□ -1.71
ERVFC1-1P60608 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC4.36□□□□□ -1.71
ERVFC1-1P60608 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
ERVFC1-1P60608 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
ERVFC1-1P60608 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
ERVFC1-1P60608 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
ERVFC1-1P60608 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
ERVFC1-1P60608 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
ERVFC1-1P60608 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
ERVFC1-1P60608 ANKRD36P1-201ENST00000344424 659 ntBASIC4.35□□□□□ -1.71
ERVFC1-1P60608 AMELX-201ENST00000348912 737 ntTSL 5 BASIC4.35□□□□□ -1.71
ERVFC1-1P60608 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
ERVFC1-1P60608 AL121886.1-201ENST00000358609 435 ntBASIC4.35□□□□□ -1.71
ERVFC1-1P60608 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC4.35□□□□□ -1.71
ERVFC1-1P60608 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
ERVFC1-1P60608 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
ERVFC1-1P60608 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC4.35□□□□□ -1.71
ERVFC1-1P60608 MTCO1P56-201ENST00000401674 224 ntBASIC4.35□□□□□ -1.71
ERVFC1-1P60608 SNRPEP6-201ENST00000407465 277 ntBASIC4.35□□□□□ -1.71
ERVFC1-1P60608 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC4.35□□□□□ -1.71
ERVFC1-1P60608 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC4.35□□□□□ -1.71
ERVFC1-1P60608 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC4.35□□□□□ -1.71
ERVFC1-1P60608 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
ERVFC1-1P60608 AC099782.1-201ENST00000425889 474 ntBASIC4.35□□□□□ -1.71
ERVFC1-1P60608 C1DP1-201ENST00000426049 402 ntBASIC4.35□□□□□ -1.71
ERVFC1-1P60608 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC4.35□□□□□ -1.71
ERVFC1-1P60608 NDUFB4P8-201ENST00000435351 367 ntBASIC4.35□□□□□ -1.71
ERVFC1-1P60608 MUPP-201ENST00000438111 566 ntBASIC4.35□□□□□ -1.71
ERVFC1-1P60608 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC4.35□□□□□ -1.71
ERVFC1-1P60608 RPL12P11-201ENST00000439970 501 ntBASIC4.35□□□□□ -1.71
ERVFC1-1P60608 MTCO2P3-201ENST00000442543 421 ntBASIC4.35□□□□□ -1.71
ERVFC1-1P60608 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC4.35□□□□□ -1.71
ERVFC1-1P60608 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC4.35□□□□□ -1.71
ERVFC1-1P60608 HMGB3P6-201ENST00000444896 598 ntBASIC4.35□□□□□ -1.71
ERVFC1-1P60608 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC4.35□□□□□ -1.71
ERVFC1-1P60608 MTND1P27-201ENST00000451117 902 ntBASIC4.35□□□□□ -1.71
ERVFC1-1P60608 ZNF736P5Y-201ENST00000451173 805 ntBASIC4.35□□□□□ -1.71
ERVFC1-1P60608 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
ERVFC1-1P60608 RN7SL254P-201ENST00000460609 284 ntBASIC4.35□□□□□ -1.71
ERVFC1-1P60608 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC4.35□□□□□ -1.71
ERVFC1-1P60608 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC4.35□□□□□ -1.71
ERVFC1-1P60608 RPS3AP43-201ENST00000479743 781 ntBASIC4.35□□□□□ -1.71
ERVFC1-1P60608 AC021006.1-201ENST00000489849 553 ntBASIC4.35□□□□□ -1.71
ERVFC1-1P60608 RPL37P23-201ENST00000492641 294 ntBASIC4.35□□□□□ -1.71
ERVFC1-1P60608 RPS17P5-201ENST00000498293 408 ntBASIC4.35□□□□□ -1.71
ERVFC1-1P60608 ARL4AP1-201ENST00000503220 705 ntBASIC4.35□□□□□ -1.71
ERVFC1-1P60608 AC112484.3-201ENST00000505910 329 ntBASIC4.35□□□□□ -1.71
ERVFC1-1P60608 RNA5SP441-201ENST00000516809 88 ntBASIC4.35□□□□□ -1.71
ERVFC1-1P60608 HMGB1P1-201ENST00000522557 636 ntBASIC4.35□□□□□ -1.71
ERVFC1-1P60608 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms