Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 AL592291.1-201ENST00000403830 352 ntBASIC4.22□□□□□ -1.73
CX3CR1P49238 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.22□□□□□ -1.73
CX3CR1P49238 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CX3CR1P49238 AL451139.1-201ENST00000434718 346 ntBASIC4.22□□□□□ -1.73
CX3CR1P49238 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC4.22□□□□□ -1.73
CX3CR1P49238 AC092647.3-201ENST00000443044 633 ntBASIC4.22□□□□□ -1.73
CX3CR1P49238 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.22□□□□□ -1.73
CX3CR1P49238 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC4.22□□□□□ -1.73
CX3CR1P49238 RPS26P39-201ENST00000469206 341 ntBASIC4.22□□□□□ -1.73
CX3CR1P49238 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.22□□□□□ -1.73
CX3CR1P49238 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC4.22□□□□□ -1.73
CX3CR1P49238 RN7SL558P-201ENST00000497468 299 ntBASIC4.22□□□□□ -1.73
CX3CR1P49238 AC140172.1-201ENST00000502928 141 ntBASIC4.22□□□□□ -1.73
CX3CR1P49238 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.22□□□□□ -1.73
CX3CR1P49238 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC4.22□□□□□ -1.73
CX3CR1P49238 AC021146.3-201ENST00000511911 260 ntBASIC4.22□□□□□ -1.73
CX3CR1P49238 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.22□□□□□ -1.73
CX3CR1P49238 RN7SKP147-201ENST00000517154 244 ntBASIC4.22□□□□□ -1.73
CX3CR1P49238 AC013701.1-201ENST00000522657 465 ntBASIC4.22□□□□□ -1.73
CX3CR1P49238 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.22□□□□□ -1.73
CX3CR1P49238 C1GALT1P1-201ENST00000548895 1089 ntBASIC4.22□□□□□ -1.73
CX3CR1P49238 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.22□□□□□ -1.73
CX3CR1P49238 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.22□□□□□ -1.73
CX3CR1P49238 AC010424.2-201ENST00000607594 443 ntBASIC4.22□□□□□ -1.73
CX3CR1P49238 AL353600.1-201ENST00000608148 251 ntBASIC4.22□□□□□ -1.73
CX3CR1P49238 AC015804.1-201ENST00000622935 435 ntBASIC4.22□□□□□ -1.73
CX3CR1P49238 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC4.22□□□□□ -1.73
CX3CR1P49238 SMG1P6-201ENST00000532337 2930 ntBASIC4.22□□□□□ -1.73
CX3CR1P49238 AC009313.2-201ENST00000417893 1941 ntBASIC4.22□□□□□ -1.73
CX3CR1P49238 MAPK10-349ENST00000641767 3661 ntBASIC4.22□□□□□ -1.73
CX3CR1P49238 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CX3CR1P49238 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC4.22□□□□□ -1.73
CX3CR1P49238 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
CX3CR1P49238 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CX3CR1P49238 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CX3CR1P49238 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
CX3CR1P49238 CASC19-284ENST00000642142 1868 ntBASIC4.22□□□□□ -1.73
CX3CR1P49238 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.22□□□□□ -1.73
CX3CR1P49238 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.73
CX3CR1P49238 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.73
CX3CR1P49238 AC000123.3-201ENST00000624029 4975 ntBASIC4.21□□□□□ -1.74
CX3CR1P49238 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.21□□□□□ -1.74
CX3CR1P49238 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.21□□□□□ -1.74
CX3CR1P49238 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
CX3CR1P49238 U8.4-201ENST00000363626 134 ntBASIC4.21□□□□□ -1.74
CX3CR1P49238 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.21□□□□□ -1.74
CX3CR1P49238 RNU6-891P-201ENST00000384280 111 ntBASIC4.21□□□□□ -1.74
CX3CR1P49238 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
CX3CR1P49238 GTF2IP5-201ENST00000414608 731 ntBASIC4.21□□□□□ -1.74
CX3CR1P49238 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.21□□□□□ -1.74
CX3CR1P49238 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.21□□□□□ -1.74
CX3CR1P49238 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.21□□□□□ -1.74
CX3CR1P49238 MTCO1P45-201ENST00000431457 267 ntBASIC4.21□□□□□ -1.74
CX3CR1P49238 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.21□□□□□ -1.74
CX3CR1P49238 RPS17P8-201ENST00000434525 335 ntBASIC4.21□□□□□ -1.74
CX3CR1P49238 AC093414.1-201ENST00000434712 514 ntBASIC4.21□□□□□ -1.74
CX3CR1P49238 TMX2P1-201ENST00000436507 708 ntBASIC4.21□□□□□ -1.74
CX3CR1P49238 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.21□□□□□ -1.74
CX3CR1P49238 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.21□□□□□ -1.74
CX3CR1P49238 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.21□□□□□ -1.74
CX3CR1P49238 AC073587.1-201ENST00000447093 876 ntBASIC4.21□□□□□ -1.74
CX3CR1P49238 RPL7L1P1-201ENST00000448259 785 ntBASIC4.21□□□□□ -1.74
CX3CR1P49238 AC005532.2-201ENST00000467154 373 ntBASIC4.21□□□□□ -1.74
CX3CR1P49238 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.21□□□□□ -1.74
CX3CR1P49238 AC006499.3-201ENST00000506077 748 ntBASIC4.21□□□□□ -1.74
CX3CR1P49238 MRPS33P2-201ENST00000507850 322 ntBASIC4.21□□□□□ -1.74
CX3CR1P49238 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC4.21□□□□□ -1.74
CX3CR1P49238 RNA5SP34-201ENST00000516887 130 ntBASIC4.21□□□□□ -1.74
CX3CR1P49238 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.21□□□□□ -1.74
CX3CR1P49238 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CX3CR1P49238 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.21□□□□□ -1.74
CX3CR1P49238 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.21□□□□□ -1.74
CX3CR1P49238 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
CX3CR1P49238 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC4.21□□□□□ -1.74
CX3CR1P49238 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC4.21□□□□□ -1.74
CX3CR1P49238 IMMP1LP1-201ENST00000605170 488 ntBASIC4.21□□□□□ -1.74
CX3CR1P49238 AL121932.1-201ENST00000605542 214 ntBASIC4.21□□□□□ -1.74
CX3CR1P49238 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CX3CR1P49238 AC145207.9-201ENST00000623802 325 ntBASIC4.21□□□□□ -1.74
CX3CR1P49238 CGA-206ENST00000630630 832 ntTSL 2 BASIC4.21□□□□□ -1.74
CX3CR1P49238 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.21□□□□□ -1.74
CX3CR1P49238 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC4.21□□□□□ -1.74
CX3CR1P49238 AL445487.1-201ENST00000415694 1580 ntBASIC4.21□□□□□ -1.74
CX3CR1P49238 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.21□□□□□ -1.74
CX3CR1P49238 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.21□□□□□ -1.74
CX3CR1P49238 AC027290.2-201ENST00000623210 18662 ntBASIC4.21□□□□□ -1.74
CX3CR1P49238 AC005332.5-201ENST00000591222 2919 ntBASIC4.21□□□□□ -1.74
CX3CR1P49238 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
CX3CR1P49238 HSPD1P11-201ENST00000508643 1702 ntBASIC4.21□□□□□ -1.74
CX3CR1P49238 AP000756.2-201ENST00000624168 2567 ntBASIC4.2□□□□□ -1.74
CX3CR1P49238 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CX3CR1P49238 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
CX3CR1P49238 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
CX3CR1P49238 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CX3CR1P49238 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
CX3CR1P49238 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
CX3CR1P49238 RPL21P108-201ENST00000413857 481 ntBASIC4.2□□□□□ -1.74
CX3CR1P49238 CEACAMP8-201ENST00000413902 580 ntBASIC4.2□□□□□ -1.74
CX3CR1P49238 AC009237.10-201ENST00000414112 510 ntBASIC4.2□□□□□ -1.74
CX3CR1P49238 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms