Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 IYD-202ENST00000344419 8742 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HTTP42858 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
HTTP42858 EIF3EP2-201ENST00000423042 1814 ntBASIC4.78□□□□□ -1.64
HTTP42858 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
HTTP42858 ALB-202ENST00000401494 1659 ntTSL 5 BASIC4.78□□□□□ -1.64
HTTP42858 AC109446.4-201ENST00000623235 2755 ntBASIC4.78□□□□□ -1.64
HTTP42858 RBFOX2-205ENST00000405409 6932 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HTTP42858 OR52E6-202ENST00000379946 954 ntBASIC4.78□□□□□ -1.64
HTTP42858 AC013429.2-201ENST00000418798 781 ntBASIC4.78□□□□□ -1.64
HTTP42858 Z74021.1-201ENST00000423610 407 ntBASIC4.78□□□□□ -1.64
HTTP42858 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.78□□□□□ -1.64
HTTP42858 SETP6-201ENST00000479329 568 ntBASIC4.78□□□□□ -1.64
HTTP42858 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HTTP42858 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC4.78□□□□□ -1.64
HTTP42858 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.78□□□□□ -1.64
HTTP42858 PTCD3-201ENST00000254630 6734 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HTTP42858 DNAH1-201ENST00000420323 13104 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HTTP42858 CA5B-201ENST00000318636 6835 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HTTP42858 PCNX1-201ENST00000304743 12919 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HTTP42858 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC4.78□□□□□ -1.64
HTTP42858 MIR490-201ENST00000384865 128 ntBASIC4.78□□□□□ -1.64
HTTP42858 AL356968.2-201ENST00000412769 1257 ntBASIC4.78□□□□□ -1.64
HTTP42858 RN7SL197P-201ENST00000466981 299 ntBASIC4.78□□□□□ -1.64
HTTP42858 AC120057.2-201ENST00000571520 271 ntBASIC4.78□□□□□ -1.64
HTTP42858 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.78□□□□□ -1.64
HTTP42858 AC010201.1-201ENST00000605051 540 ntBASIC4.78□□□□□ -1.64
HTTP42858 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HTTP42858 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HTTP42858 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.78□□□□□ -1.64
HTTP42858 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.78□□□□□ -1.64
HTTP42858 FRY-207ENST00000542859 13200 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
HTTP42858 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC4.78□□□□□ -1.64
HTTP42858 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HTTP42858 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.77□□□□□ -1.65
HTTP42858 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.77□□□□□ -1.65
HTTP42858 AL596275.2-208ENST00000641192 594 ntBASIC4.77□□□□□ -1.65
HTTP42858 ZFHX3-207ENST00000641206 16414 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
HTTP42858 NCKAP1L-201ENST00000293373 9016 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HTTP42858 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HTTP42858 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
HTTP42858 CNR1-202ENST00000369499 5549 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
HTTP42858 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
HTTP42858 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.77□□□□□ -1.65
HTTP42858 GRIN2A-202ENST00000396573 14450 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HTTP42858 AC104260.2-201ENST00000623551 3497 ntBASIC4.77□□□□□ -1.65
HTTP42858 MTND5P1-201ENST00000445440 1375 ntBASIC4.77□□□□□ -1.65
HTTP42858 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC4.77□□□□□ -1.65
HTTP42858 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HTTP42858 RN7SKP156-201ENST00000410308 342 ntBASIC4.77□□□□□ -1.65
HTTP42858 AC245052.5-201ENST00000416320 649 ntBASIC4.77□□□□□ -1.65
HTTP42858 CKS1BP6-201ENST00000424932 240 ntBASIC4.77□□□□□ -1.65
HTTP42858 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HTTP42858 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC4.77□□□□□ -1.65
HTTP42858 RPS27AP17-201ENST00000463344 455 ntBASIC4.77□□□□□ -1.65
HTTP42858 AF213884.1-201ENST00000488102 463 ntBASIC4.77□□□□□ -1.65
HTTP42858 RN7SL323P-201ENST00000494712 295 ntBASIC4.77□□□□□ -1.65
HTTP42858 AC027455.1-201ENST00000574104 594 ntBASIC4.77□□□□□ -1.65
HTTP42858 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.77□□□□□ -1.65
HTTP42858 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.77□□□□□ -1.65
HTTP42858 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.77□□□□□ -1.65
HTTP42858 FP325313.1-201ENST00000638228 703 ntBASIC4.77□□□□□ -1.65
HTTP42858 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HTTP42858 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
HTTP42858 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HTTP42858 FREM1-204ENST00000422223 10086 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
HTTP42858 RNU1-63P-201ENST00000383902 164 ntBASIC4.77□□□□□ -1.65
HTTP42858 RNU4-6P-201ENST00000410804 122 ntBASIC4.77□□□□□ -1.65
HTTP42858 NPM1P36-201ENST00000415681 835 ntBASIC4.77□□□□□ -1.65
HTTP42858 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.77□□□□□ -1.65
HTTP42858 AC026427.2-201ENST00000506228 536 ntBASIC4.77□□□□□ -1.65
HTTP42858 AC097486.1-201ENST00000515331 210 ntBASIC4.77□□□□□ -1.65
HTTP42858 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.77□□□□□ -1.65
HTTP42858 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.77□□□□□ -1.65
HTTP42858 AP005205.1-201ENST00000563503 508 ntBASIC4.77□□□□□ -1.65
HTTP42858 AL034408.1-202ENST00000636088 415 ntBASIC4.77□□□□□ -1.65
HTTP42858 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
HTTP42858 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
HTTP42858 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC4.76□□□□□ -1.65
HTTP42858 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HTTP42858 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HTTP42858 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HTTP42858 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.76□□□□□ -1.65
HTTP42858 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
HTTP42858 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC4.76□□□□□ -1.65
HTTP42858 KAT6B-202ENST00000372711 7560 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
HTTP42858 AC108032.1-201ENST00000416706 207 ntBASIC4.76□□□□□ -1.65
HTTP42858 AC104849.1-201ENST00000462623 405 ntBASIC4.76□□□□□ -1.65
HTTP42858 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.76□□□□□ -1.65
HTTP42858 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HTTP42858 RNU4ATAC18P-201ENST00000516179 126 ntBASIC4.76□□□□□ -1.65
HTTP42858 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.76□□□□□ -1.65
HTTP42858 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.76□□□□□ -1.65
HTTP42858 AL606490.9-201ENST00000603331 271 ntBASIC4.76□□□□□ -1.65
HTTP42858 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HTTP42858 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
HTTP42858 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC4.76□□□□□ -1.65
HTTP42858 FGD4-202ENST00000427716 8242 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
HTTP42858 UG0898H09-202ENST00000623646 7040 ntBASIC4.76□□□□□ -1.65
HTTP42858 COX5BP7-201ENST00000414780 274 ntBASIC4.76□□□□□ -1.65
HTTP42858 PPIAP15-201ENST00000479662 484 ntBASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms