Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 EED-206ENST00000527888 1422 ntTSL 2 BASIC5.86□□□□□ -1.47
HOXC12P31275 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
HOXC12P31275 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC5.86□□□□□ -1.47
HOXC12P31275 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
HOXC12P31275 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
HOXC12P31275 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
HOXC12P31275 MIR548F1-201ENST00000408667 84 ntBASIC5.86□□□□□ -1.47
HOXC12P31275 OR8G2P-201ENST00000412796 908 ntBASIC5.86□□□□□ -1.47
HOXC12P31275 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC5.86□□□□□ -1.47
HOXC12P31275 FCF1P2-201ENST00000415284 583 ntBASIC5.86□□□□□ -1.47
HOXC12P31275 LINC00993-201ENST00000420453 540 ntBASIC5.86□□□□□ -1.47
HOXC12P31275 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC5.86□□□□□ -1.47
HOXC12P31275 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC5.86□□□□□ -1.47
HOXC12P31275 AC113412.1-201ENST00000425840 504 ntBASIC5.86□□□□□ -1.47
HOXC12P31275 DYNLL1P7-201ENST00000429273 258 ntBASIC5.86□□□□□ -1.47
HOXC12P31275 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HOXC12P31275 ARMC4P1-201ENST00000438905 707 ntBASIC5.86□□□□□ -1.47
HOXC12P31275 POU5F1P5-201ENST00000445059 658 ntBASIC5.86□□□□□ -1.47
HOXC12P31275 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC5.86□□□□□ -1.47
HOXC12P31275 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC5.86□□□□□ -1.47
HOXC12P31275 RPL18AP17-201ENST00000455326 198 ntBASIC5.86□□□□□ -1.47
HOXC12P31275 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HOXC12P31275 NF1P3-201ENST00000457709 450 ntBASIC5.86□□□□□ -1.47
HOXC12P31275 OR9M1P-201ENST00000459641 921 ntBASIC5.86□□□□□ -1.47
HOXC12P31275 AC099340.1-201ENST00000475247 599 ntBASIC5.86□□□□□ -1.47
HOXC12P31275 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC5.86□□□□□ -1.47
HOXC12P31275 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC5.86□□□□□ -1.47
HOXC12P31275 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC5.86□□□□□ -1.47
HOXC12P31275 AC109464.2-201ENST00000510242 943 ntBASIC5.86□□□□□ -1.47
HOXC12P31275 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
HOXC12P31275 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
HOXC12P31275 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HOXC12P31275 OR8G3P-201ENST00000533406 921 ntBASIC5.86□□□□□ -1.47
HOXC12P31275 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC5.86□□□□□ -1.47
HOXC12P31275 AC007068.2-201ENST00000543168 395 ntBASIC5.86□□□□□ -1.47
HOXC12P31275 CR383656.6-201ENST00000550518 394 ntBASIC5.86□□□□□ -1.47
HOXC12P31275 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC5.86□□□□□ -1.47
HOXC12P31275 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.86□□□□□ -1.47
HOXC12P31275 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC5.86□□□□□ -1.47
HOXC12P31275 AC009063.1-201ENST00000563342 702 ntBASIC5.86□□□□□ -1.47
HOXC12P31275 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC5.86□□□□□ -1.47
HOXC12P31275 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC5.86□□□□□ -1.47
HOXC12P31275 MIR4528-201ENST00000577763 90 ntBASIC5.86□□□□□ -1.47
HOXC12P31275 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC5.86□□□□□ -1.47
HOXC12P31275 RPL29P33-201ENST00000587474 316 ntBASIC5.86□□□□□ -1.47
HOXC12P31275 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.86□□□□□ -1.47
HOXC12P31275 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC5.86□□□□□ -1.47
HOXC12P31275 AC091133.5-201ENST00000603088 301 ntBASIC5.86□□□□□ -1.47
HOXC12P31275 RNU6-88P-201ENST00000606801 100 ntBASIC5.86□□□□□ -1.47
HOXC12P31275 AL357078.3-201ENST00000607528 618 ntBASIC5.86□□□□□ -1.47
HOXC12P31275 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC5.86□□□□□ -1.47
HOXC12P31275 Z95327.3-201ENST00000610385 572 ntBASIC5.86□□□□□ -1.47
HOXC12P31275 RN7SL261P-201ENST00000613441 282 ntBASIC5.86□□□□□ -1.47
HOXC12P31275 AL031658.2-201ENST00000616850 651 ntBASIC5.86□□□□□ -1.47
HOXC12P31275 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC5.86□□□□□ -1.47
HOXC12P31275 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
HOXC12P31275 AC034229.6-201ENST00000623704 224 ntBASIC5.86□□□□□ -1.47
HOXC12P31275 SNORA16A-202ENST00000628458 135 ntBASIC5.86□□□□□ -1.47
HOXC12P31275 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC5.86□□□□□ -1.47
HOXC12P31275 UOX-205ENST00000640983 544 ntTSL 4 BASIC5.86□□□□□ -1.47
HOXC12P31275 AC010325.3-201ENST00000641084 394 ntBASIC5.86□□□□□ -1.47
HOXC12P31275 AL354702.2-202ENST00000641481 890 ntBASIC5.86□□□□□ -1.47
HOXC12P31275 MIR193BHG-214ENST00000641765 509 ntBASIC5.86□□□□□ -1.47
HOXC12P31275 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HOXC12P31275 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HOXC12P31275 AC011455.2-201ENST00000599320 3336 ntBASIC5.86□□□□□ -1.47
HOXC12P31275 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
HOXC12P31275 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC5.86□□□□□ -1.47
HOXC12P31275 AC093278.2-201ENST00000564956 2485 ntBASIC5.86□□□□□ -1.47
HOXC12P31275 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.86□□□□□ -1.47
HOXC12P31275 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
HOXC12P31275 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
HOXC12P31275 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
HOXC12P31275 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
HOXC12P31275 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC5.86□□□□□ -1.47
HOXC12P31275 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
HOXC12P31275 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
HOXC12P31275 AC020656.2-201ENST00000613291 5309 ntBASIC5.85□□□□□ -1.47
HOXC12P31275 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC5.85□□□□□ -1.47
HOXC12P31275 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC5.85□□□□□ -1.47
HOXC12P31275 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
HOXC12P31275 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
HOXC12P31275 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
HOXC12P31275 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
HOXC12P31275 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC5.85□□□□□ -1.47
HOXC12P31275 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HOXC12P31275 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
HOXC12P31275 VTRNA3-1P-201ENST00000362552 102 ntBASIC5.85□□□□□ -1.47
HOXC12P31275 RNU6-433P-201ENST00000363216 104 ntBASIC5.85□□□□□ -1.47
HOXC12P31275 RNU1-24P-201ENST00000364285 165 ntBASIC5.85□□□□□ -1.47
HOXC12P31275 RNU6-867P-201ENST00000364956 107 ntBASIC5.85□□□□□ -1.47
HOXC12P31275 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
HOXC12P31275 RNU6-259P-201ENST00000383999 107 ntBASIC5.85□□□□□ -1.47
HOXC12P31275 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
HOXC12P31275 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
HOXC12P31275 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
HOXC12P31275 RNA5SP431-201ENST00000410312 120 ntBASIC5.85□□□□□ -1.47
HOXC12P31275 RN7SKP240-201ENST00000410583 375 ntBASIC5.85□□□□□ -1.47
HOXC12P31275 RNU2-6P-201ENST00000411404 190 ntBASIC5.85□□□□□ -1.47
HOXC12P31275 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 124.3 ms