Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 AC006206.1-201ENST00000544842 3387 ntBASIC5.04□□□□□ -1.6
UBL4AP11441 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
UBL4AP11441 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
UBL4AP11441 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
UBL4AP11441 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
UBL4AP11441 AC073055.1-201ENST00000456901 1621 ntBASIC5.04□□□□□ -1.6
UBL4AP11441 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.04□□□□□ -1.6
UBL4AP11441 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
UBL4AP11441 AC008079.2-201ENST00000623543 20396 ntBASIC5.04□□□□□ -1.6
UBL4AP11441 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
UBL4AP11441 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
UBL4AP11441 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC5.03□□□□□ -1.6
UBL4AP11441 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.03□□□□□ -1.6
UBL4AP11441 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
UBL4AP11441 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
UBL4AP11441 LDHAL6CP-202ENST00000550738 3224 ntBASIC5.03□□□□□ -1.6
UBL4AP11441 AL627171.1-201ENST00000618845 1308 ntBASIC5.03□□□□□ -1.6
UBL4AP11441 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
UBL4AP11441 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
UBL4AP11441 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
UBL4AP11441 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
UBL4AP11441 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
UBL4AP11441 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
UBL4AP11441 TMSB4XP4-201ENST00000323496 618 ntBASIC5.03□□□□□ -1.6
UBL4AP11441 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.03□□□□□ -1.6
UBL4AP11441 RNU5B-1-201ENST00000363286 116 ntBASIC5.03□□□□□ -1.6
UBL4AP11441 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
UBL4AP11441 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.03□□□□□ -1.6
UBL4AP11441 MIR525-201ENST00000384978 85 ntBASIC5.03□□□□□ -1.6
UBL4AP11441 RPS24P12-201ENST00000402084 394 ntBASIC5.03□□□□□ -1.6
UBL4AP11441 RNU6-603P-201ENST00000411403 107 ntBASIC5.03□□□□□ -1.6
UBL4AP11441 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC5.03□□□□□ -1.6
UBL4AP11441 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.03□□□□□ -1.6
UBL4AP11441 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC5.03□□□□□ -1.6
UBL4AP11441 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.03□□□□□ -1.6
UBL4AP11441 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
UBL4AP11441 NDUFB4P8-201ENST00000435351 367 ntBASIC5.03□□□□□ -1.6
UBL4AP11441 PCNPP2-201ENST00000441651 455 ntBASIC5.03□□□□□ -1.6
UBL4AP11441 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.03□□□□□ -1.6
UBL4AP11441 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC5.03□□□□□ -1.6
UBL4AP11441 AC073909.1-201ENST00000447112 999 ntBASIC5.03□□□□□ -1.6
UBL4AP11441 OR51B8P-201ENST00000449892 769 ntBASIC5.03□□□□□ -1.6
UBL4AP11441 HMGB1P38-201ENST00000490557 577 ntBASIC5.03□□□□□ -1.6
UBL4AP11441 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.03□□□□□ -1.6
UBL4AP11441 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC5.03□□□□□ -1.6
UBL4AP11441 AC021106.1-201ENST00000509020 1058 ntBASIC5.03□□□□□ -1.6
UBL4AP11441 AC079064.1-201ENST00000528365 362 ntBASIC5.03□□□□□ -1.6
UBL4AP11441 AC022882.1-201ENST00000532142 501 ntBASIC5.03□□□□□ -1.6
UBL4AP11441 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
UBL4AP11441 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC5.03□□□□□ -1.6
UBL4AP11441 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.03□□□□□ -1.6
UBL4AP11441 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC5.03□□□□□ -1.6
UBL4AP11441 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.03□□□□□ -1.6
UBL4AP11441 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC5.03□□□□□ -1.6
UBL4AP11441 AP005403.1-201ENST00000579720 229 ntBASIC5.03□□□□□ -1.6
UBL4AP11441 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC5.03□□□□□ -1.6
UBL4AP11441 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.03□□□□□ -1.6
UBL4AP11441 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC5.03□□□□□ -1.6
UBL4AP11441 EIF1P6-201ENST00000600054 334 ntBASIC5.03□□□□□ -1.6
UBL4AP11441 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC5.03□□□□□ -1.6
UBL4AP11441 AC105148.1-201ENST00000604961 409 ntBASIC5.03□□□□□ -1.6
UBL4AP11441 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC5.03□□□□□ -1.6
UBL4AP11441 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.03□□□□□ -1.6
UBL4AP11441 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.03□□□□□ -1.6
UBL4AP11441 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
UBL4AP11441 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
UBL4AP11441 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
UBL4AP11441 AC016717.3-201ENST00000624730 554 ntBASIC5.03□□□□□ -1.6
UBL4AP11441 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.03□□□□□ -1.6
UBL4AP11441 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC5.03□□□□□ -1.6
UBL4AP11441 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.03□□□□□ -1.6
UBL4AP11441 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
UBL4AP11441 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
UBL4AP11441 AL031595.2-201ENST00000624215 19071 ntBASIC5.03□□□□□ -1.6
UBL4AP11441 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
UBL4AP11441 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
UBL4AP11441 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.03□□□□□ -1.6
UBL4AP11441 AC090017.1-201ENST00000548612 1779 ntBASIC5.03□□□□□ -1.6
UBL4AP11441 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
UBL4AP11441 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
UBL4AP11441 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.03□□□□□ -1.6
UBL4AP11441 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
UBL4AP11441 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
UBL4AP11441 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
UBL4AP11441 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
UBL4AP11441 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.02□□□□□ -1.61
UBL4AP11441 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
UBL4AP11441 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.02□□□□□ -1.61
UBL4AP11441 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
UBL4AP11441 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
UBL4AP11441 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.02□□□□□ -1.61
UBL4AP11441 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
UBL4AP11441 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC5.02□□□□□ -1.61
UBL4AP11441 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
UBL4AP11441 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
UBL4AP11441 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
UBL4AP11441 RNU6-1339P-201ENST00000363574 91 ntBASIC5.02□□□□□ -1.61
UBL4AP11441 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
UBL4AP11441 AL031985.1-201ENST00000392713 418 ntBASIC5.02□□□□□ -1.61
UBL4AP11441 Z93019.1-201ENST00000416450 973 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms