Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.57□□□□□ -1.68
HLA-DQB2P05538 LINC01808-202ENST00000641680 1116 ntBASIC4.57□□□□□ -1.68
HLA-DQB2P05538 AC139713.2-215ENST00000641428 5037 ntBASIC4.57□□□□□ -1.68
HLA-DQB2P05538 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC4.57□□□□□ -1.68
HLA-DQB2P05538 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.57□□□□□ -1.68
HLA-DQB2P05538 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.57□□□□□ -1.68
HLA-DQB2P05538 AL132640.2-201ENST00000559968 1698 ntBASIC4.57□□□□□ -1.68
HLA-DQB2P05538 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.57□□□□□ -1.68
HLA-DQB2P05538 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.57□□□□□ -1.68
HLA-DQB2P05538 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.57□□□□□ -1.68
HLA-DQB2P05538 AL592148.3-201ENST00000608771 2646 ntBASIC4.57□□□□□ -1.68
HLA-DQB2P05538 MAPK10-286ENST00000641208 8747 ntBASIC4.56□□□□□ -1.68
HLA-DQB2P05538 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HLA-DQB2P05538 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC4.56□□□□□ -1.68
HLA-DQB2P05538 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
HLA-DQB2P05538 MIR585-201ENST00000384887 94 ntBASIC4.56□□□□□ -1.68
HLA-DQB2P05538 MIR195-201ENST00000385194 87 ntBASIC4.56□□□□□ -1.68
HLA-DQB2P05538 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
HLA-DQB2P05538 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.56□□□□□ -1.68
HLA-DQB2P05538 AC006065.1-201ENST00000422539 802 ntBASIC4.56□□□□□ -1.68
HLA-DQB2P05538 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.56□□□□□ -1.68
HLA-DQB2P05538 RPL7AP25-201ENST00000423357 805 ntBASIC4.56□□□□□ -1.68
HLA-DQB2P05538 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.56□□□□□ -1.68
HLA-DQB2P05538 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC4.56□□□□□ -1.68
HLA-DQB2P05538 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.56□□□□□ -1.68
HLA-DQB2P05538 AC012671.1-201ENST00000451912 203 ntBASIC4.56□□□□□ -1.68
HLA-DQB2P05538 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
HLA-DQB2P05538 OR11I1P-201ENST00000486033 954 ntBASIC4.56□□□□□ -1.68
HLA-DQB2P05538 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC4.56□□□□□ -1.68
HLA-DQB2P05538 BTG4P1-201ENST00000510421 183 ntBASIC4.56□□□□□ -1.68
HLA-DQB2P05538 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC4.56□□□□□ -1.68
HLA-DQB2P05538 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HLA-DQB2P05538 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC4.56□□□□□ -1.68
HLA-DQB2P05538 AC107993.1-201ENST00000591343 684 ntBASIC4.56□□□□□ -1.68
HLA-DQB2P05538 AC010201.1-201ENST00000605051 540 ntBASIC4.56□□□□□ -1.68
HLA-DQB2P05538 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.56□□□□□ -1.68
HLA-DQB2P05538 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HLA-DQB2P05538 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
HLA-DQB2P05538 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HLA-DQB2P05538 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.56□□□□□ -1.68
HLA-DQB2P05538 AC019072.1-201ENST00000604535 1551 ntBASIC4.56□□□□□ -1.68
HLA-DQB2P05538 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
HLA-DQB2P05538 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
HLA-DQB2P05538 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
HLA-DQB2P05538 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.56□□□□□ -1.68
HLA-DQB2P05538 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC4.56□□□□□ -1.68
HLA-DQB2P05538 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HLA-DQB2P05538 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
HLA-DQB2P05538 AC116158.1-201ENST00000560231 2129 ntBASIC4.55□□□□□ -1.68
HLA-DQB2P05538 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
HLA-DQB2P05538 OR51H2P-202ENST00000641424 3046 ntBASIC4.55□□□□□ -1.68
HLA-DQB2P05538 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.55□□□□□ -1.68
HLA-DQB2P05538 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.55□□□□□ -1.68
HLA-DQB2P05538 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.55□□□□□ -1.68
HLA-DQB2P05538 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.55□□□□□ -1.68
HLA-DQB2P05538 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HLA-DQB2P05538 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HLA-DQB2P05538 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
HLA-DQB2P05538 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
HLA-DQB2P05538 RNA5SP332-201ENST00000391063 115 ntBASIC4.55□□□□□ -1.68
HLA-DQB2P05538 AC119751.6-201ENST00000416712 186 ntBASIC4.55□□□□□ -1.68
HLA-DQB2P05538 AC092570.3-201ENST00000420113 693 ntBASIC4.55□□□□□ -1.68
HLA-DQB2P05538 NPM1P26-201ENST00000426339 738 ntBASIC4.55□□□□□ -1.68
HLA-DQB2P05538 CDY14P-201ENST00000431260 1014 ntBASIC4.55□□□□□ -1.68
HLA-DQB2P05538 CDY12P-201ENST00000440679 1015 ntBASIC4.55□□□□□ -1.68
HLA-DQB2P05538 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.55□□□□□ -1.68
HLA-DQB2P05538 CDY13P-201ENST00000445813 1015 ntBASIC4.55□□□□□ -1.68
HLA-DQB2P05538 AL162591.2-201ENST00000449634 317 ntBASIC4.55□□□□□ -1.68
HLA-DQB2P05538 CDY23P-201ENST00000451661 1014 ntBASIC4.55□□□□□ -1.68
HLA-DQB2P05538 SEPT7P3-201ENST00000455017 621 ntBASIC4.55□□□□□ -1.68
HLA-DQB2P05538 RPS27AP17-201ENST00000463344 455 ntBASIC4.55□□□□□ -1.68
HLA-DQB2P05538 RPL5P22-201ENST00000480199 884 ntBASIC4.55□□□□□ -1.68
HLA-DQB2P05538 AC007686.1-201ENST00000488511 463 ntBASIC4.55□□□□□ -1.68
HLA-DQB2P05538 RN7SL346P-201ENST00000491561 294 ntBASIC4.55□□□□□ -1.68
HLA-DQB2P05538 DEFB109F-201ENST00000491870 277 ntBASIC4.55□□□□□ -1.68
HLA-DQB2P05538 AC093720.1-201ENST00000505681 714 ntBASIC4.55□□□□□ -1.68
HLA-DQB2P05538 AC111000.3-201ENST00000508057 576 ntBASIC4.55□□□□□ -1.68
HLA-DQB2P05538 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.55□□□□□ -1.68
HLA-DQB2P05538 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.55□□□□□ -1.68
HLA-DQB2P05538 RNA5SP464-201ENST00000516251 108 ntBASIC4.55□□□□□ -1.68
HLA-DQB2P05538 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.55□□□□□ -1.68
HLA-DQB2P05538 OR5AN2P-201ENST00000534535 896 ntBASIC4.55□□□□□ -1.68
HLA-DQB2P05538 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.55□□□□□ -1.68
HLA-DQB2P05538 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.55□□□□□ -1.68
HLA-DQB2P05538 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.55□□□□□ -1.68
HLA-DQB2P05538 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.55□□□□□ -1.68
HLA-DQB2P05538 AL034374.2-201ENST00000605281 548 ntBASIC4.55□□□□□ -1.68
HLA-DQB2P05538 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HLA-DQB2P05538 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.55□□□□□ -1.68
HLA-DQB2P05538 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC4.55□□□□□ -1.68
HLA-DQB2P05538 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HLA-DQB2P05538 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.55□□□□□ -1.68
HLA-DQB2P05538 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
HLA-DQB2P05538 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.55□□□□□ -1.68
HLA-DQB2P05538 AC012618.3-205ENST00000637896 1496 ntBASIC4.55□□□□□ -1.68
HLA-DQB2P05538 RAD17P1-201ENST00000418130 2042 ntBASIC4.55□□□□□ -1.68
HLA-DQB2P05538 AC073429.2-201ENST00000569694 1444 ntBASIC4.55□□□□□ -1.68
HLA-DQB2P05538 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.54□□□□□ -1.68
HLA-DQB2P05538 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HLA-DQB2P05538 Z98755.1-201ENST00000407015 1384 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 136.4 ms