Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AC011471.4-201ENST00000638271 216 ntBASIC6.55□□□□□ -1.36
PDGFAP04085 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
PDGFAP04085 ST7-203ENST00000393443 2360 ntTSL 2 BASIC6.55□□□□□ -1.36
PDGFAP04085 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
PDGFAP04085 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
PDGFAP04085 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
PDGFAP04085 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
PDGFAP04085 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC6.55□□□□□ -1.36
PDGFAP04085 DICER1-201ENST00000343455 10277 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
PDGFAP04085 HEPH-209ENST00000519389 6013 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
PDGFAP04085 KIFAP3-203ENST00000367767 2718 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
PDGFAP04085 YOD1-202ENST00000367084 6291 ntTSL 2 BASIC6.54□□□□□ -1.36
PDGFAP04085 ZNF667-208ENST00000629654 3265 ntTSL 5 BASIC6.54□□□□□ -1.36
PDGFAP04085 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
PDGFAP04085 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
PDGFAP04085 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
PDGFAP04085 GLYATL1P1-201ENST00000528297 1607 ntBASIC6.54□□□□□ -1.36
PDGFAP04085 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC6.54□□□□□ -1.36
PDGFAP04085 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC6.54□□□□□ -1.36
PDGFAP04085 FANCD2P2-201ENST00000437591 1400 ntBASIC6.54□□□□□ -1.36
PDGFAP04085 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
PDGFAP04085 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
PDGFAP04085 Y_RNA.356-201ENST00000365475 113 ntBASIC6.54□□□□□ -1.36
PDGFAP04085 MIR137-201ENST00000385223 102 ntBASIC6.54□□□□□ -1.36
PDGFAP04085 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
PDGFAP04085 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
PDGFAP04085 AL603766.1-201ENST00000407763 664 ntBASIC6.54□□□□□ -1.36
PDGFAP04085 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
PDGFAP04085 MTND4LP17-201ENST00000414607 293 ntBASIC6.54□□□□□ -1.36
PDGFAP04085 AL049651.2-202ENST00000419734 412 ntTSL 5 BASIC6.54□□□□□ -1.36
PDGFAP04085 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC6.54□□□□□ -1.36
PDGFAP04085 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC6.54□□□□□ -1.36
PDGFAP04085 TEX41-204ENST00000423031 491 ntTSL 4 BASIC6.54□□□□□ -1.36
PDGFAP04085 SDCBPP2-201ENST00000424643 885 ntBASIC6.54□□□□□ -1.36
PDGFAP04085 AC023347.2-201ENST00000433994 462 ntBASIC6.54□□□□□ -1.36
PDGFAP04085 CBX1P1-201ENST00000440184 427 ntBASIC6.54□□□□□ -1.36
PDGFAP04085 MTND5P14-201ENST00000441481 1267 ntBASIC6.54□□□□□ -1.36
PDGFAP04085 SNRPGP6-201ENST00000451124 220 ntBASIC6.54□□□□□ -1.36
PDGFAP04085 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC6.54□□□□□ -1.36
PDGFAP04085 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
PDGFAP04085 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
PDGFAP04085 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
PDGFAP04085 NDUFB2-215ENST00000482954 544 ntTSL 3 BASIC6.54□□□□□ -1.36
PDGFAP04085 AC013356.1-201ENST00000489027 564 ntBASIC6.54□□□□□ -1.36
PDGFAP04085 AC106872.4-201ENST00000510050 523 ntBASIC6.54□□□□□ -1.36
PDGFAP04085 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC6.54□□□□□ -1.36
PDGFAP04085 snoU109.5-201ENST00000516231 132 ntBASIC6.54□□□□□ -1.36
PDGFAP04085 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC6.54□□□□□ -1.36
PDGFAP04085 PTPRJ-AS1-201ENST00000533964 301 ntTSL 5 BASIC6.54□□□□□ -1.36
PDGFAP04085 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC6.54□□□□□ -1.36
PDGFAP04085 AC034268.2-201ENST00000571784 482 ntBASIC6.54□□□□□ -1.36
PDGFAP04085 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC6.54□□□□□ -1.36
PDGFAP04085 RBM4-213ENST00000578778 582 ntTSL 4 BASIC6.54□□□□□ -1.36
PDGFAP04085 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC6.54□□□□□ -1.36
PDGFAP04085 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC6.54□□□□□ -1.36
PDGFAP04085 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC6.54□□□□□ -1.36
PDGFAP04085 BNIP3P10-201ENST00000605360 577 ntBASIC6.54□□□□□ -1.36
PDGFAP04085 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC6.54□□□□□ -1.36
PDGFAP04085 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC6.54□□□□□ -1.36
PDGFAP04085 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC6.54□□□□□ -1.36
PDGFAP04085 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
PDGFAP04085 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC6.54□□□□□ -1.36
PDGFAP04085 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.54□□□□□ -1.36
PDGFAP04085 PPP3R2-201ENST00000374806 3387 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
PDGFAP04085 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
PDGFAP04085 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
PDGFAP04085 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
PDGFAP04085 CEBPZ-201ENST00000234170 3463 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
PDGFAP04085 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
PDGFAP04085 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC6.54□□□□□ -1.36
PDGFAP04085 UTP14C-201ENST00000521776 5529 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
PDGFAP04085 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
PDGFAP04085 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC6.54□□□□□ -1.36
PDGFAP04085 HDAC1P2-201ENST00000453661 1398 ntBASIC6.54□□□□□ -1.36
PDGFAP04085 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
PDGFAP04085 AC018688.1-201ENST00000636528 1754 ntBASIC6.54□□□□□ -1.36
PDGFAP04085 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
PDGFAP04085 ANKRD62P1-201ENST00000434304 1623 ntBASIC6.54□□□□□ -1.36
PDGFAP04085 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
PDGFAP04085 MKI67P1-201ENST00000604297 1460 ntBASIC6.53□□□□□ -1.36
PDGFAP04085 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
PDGFAP04085 PDE4B-206ENST00000423207 4546 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
PDGFAP04085 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
PDGFAP04085 NUMB-217ENST00000555738 1553 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
PDGFAP04085 AC112243.1-201ENST00000623949 3851 ntBASIC6.53□□□□□ -1.36
PDGFAP04085 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
PDGFAP04085 FBXW10-202ENST00000308799 3456 ntAPPRIS ALT2 TSL 2 BASIC6.53□□□□□ -1.36
PDGFAP04085 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
PDGFAP04085 POGK-201ENST00000367875 6254 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
PDGFAP04085 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
PDGFAP04085 RN7SKP250-201ENST00000363924 321 ntBASIC6.53□□□□□ -1.36
PDGFAP04085 RNU6-289P-201ENST00000364093 107 ntBASIC6.53□□□□□ -1.36
PDGFAP04085 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
PDGFAP04085 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
PDGFAP04085 SNORA7A-201ENST00000384765 139 ntBASIC6.53□□□□□ -1.36
PDGFAP04085 TRBV25-1-202ENST00000390398 381 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
PDGFAP04085 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC6.53□□□□□ -1.36
PDGFAP04085 SUMO2P13-201ENST00000403109 272 ntBASIC6.53□□□□□ -1.36
PDGFAP04085 RNU4-64P-201ENST00000410795 131 ntBASIC6.53□□□□□ -1.36
PDGFAP04085 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms