Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 AL353600.1-201ENST00000608148 251 ntBASIC4.56□□□□□ -1.68
MT-ND1P03886 AC015908.5-201ENST00000623289 343 ntBASIC4.56□□□□□ -1.68
MT-ND1P03886 AL356094.1-201ENST00000624663 1212 ntBASIC4.56□□□□□ -1.68
MT-ND1P03886 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.56□□□□□ -1.68
MT-ND1P03886 OR52B5P-202ENST00000641118 1110 ntBASIC4.56□□□□□ -1.68
MT-ND1P03886 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
MT-ND1P03886 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
MT-ND1P03886 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
MT-ND1P03886 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC4.56□□□□□ -1.68
MT-ND1P03886 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.56□□□□□ -1.68
MT-ND1P03886 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.56□□□□□ -1.68
MT-ND1P03886 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
MT-ND1P03886 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.55□□□□□ -1.68
MT-ND1P03886 AL359922.3-201ENST00000624779 1670 ntBASIC4.55□□□□□ -1.68
MT-ND1P03886 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
MT-ND1P03886 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
MT-ND1P03886 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
MT-ND1P03886 OR1F12-201ENST00000402365 945 ntBASIC4.55□□□□□ -1.68
MT-ND1P03886 AL357515.1-201ENST00000402967 542 ntBASIC4.55□□□□□ -1.68
MT-ND1P03886 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
MT-ND1P03886 RN7SKP126-201ENST00000411143 300 ntBASIC4.55□□□□□ -1.68
MT-ND1P03886 RPL6P29-201ENST00000414863 865 ntBASIC4.55□□□□□ -1.68
MT-ND1P03886 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC4.55□□□□□ -1.68
MT-ND1P03886 MTND2P11-201ENST00000423638 648 ntBASIC4.55□□□□□ -1.68
MT-ND1P03886 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.55□□□□□ -1.68
MT-ND1P03886 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.55□□□□□ -1.68
MT-ND1P03886 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.55□□□□□ -1.68
MT-ND1P03886 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.55□□□□□ -1.68
MT-ND1P03886 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC4.55□□□□□ -1.68
MT-ND1P03886 RPS26P2-201ENST00000440331 348 ntBASIC4.55□□□□□ -1.68
MT-ND1P03886 Z99127.2-201ENST00000441426 334 ntBASIC4.55□□□□□ -1.68
MT-ND1P03886 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC4.55□□□□□ -1.68
MT-ND1P03886 AL353898.1-201ENST00000444055 238 ntBASIC4.55□□□□□ -1.68
MT-ND1P03886 RPS15AP29-201ENST00000445539 400 ntBASIC4.55□□□□□ -1.68
MT-ND1P03886 MORF4L1P4-201ENST00000450245 976 ntBASIC4.55□□□□□ -1.68
MT-ND1P03886 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.55□□□□□ -1.68
MT-ND1P03886 RPL7AP52-201ENST00000458096 790 ntBASIC4.55□□□□□ -1.68
MT-ND1P03886 RN7SL517P-201ENST00000462240 305 ntBASIC4.55□□□□□ -1.68
MT-ND1P03886 AC022795.1-201ENST00000473808 480 ntBASIC4.55□□□□□ -1.68
MT-ND1P03886 RPS4XP1-201ENST00000482189 787 ntBASIC4.55□□□□□ -1.68
MT-ND1P03886 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
MT-ND1P03886 DEFB109F-201ENST00000491870 277 ntBASIC4.55□□□□□ -1.68
MT-ND1P03886 AC104109.1-201ENST00000498563 436 ntBASIC4.55□□□□□ -1.68
MT-ND1P03886 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC4.55□□□□□ -1.68
MT-ND1P03886 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.55□□□□□ -1.68
MT-ND1P03886 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC4.55□□□□□ -1.68
MT-ND1P03886 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
MT-ND1P03886 AC108471.1-201ENST00000513977 287 ntBASIC4.55□□□□□ -1.68
MT-ND1P03886 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.55□□□□□ -1.68
MT-ND1P03886 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
MT-ND1P03886 CASP1-216ENST00000534497 825 ntTSL 5 BASIC4.55□□□□□ -1.68
MT-ND1P03886 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.55□□□□□ -1.68
MT-ND1P03886 AC074029.2-201ENST00000551045 634 ntBASIC4.55□□□□□ -1.68
MT-ND1P03886 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.55□□□□□ -1.68
MT-ND1P03886 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.55□□□□□ -1.68
MT-ND1P03886 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC4.55□□□□□ -1.68
MT-ND1P03886 AC105254.2-201ENST00000603636 436 ntBASIC4.55□□□□□ -1.68
MT-ND1P03886 IMMP1LP3-201ENST00000604197 224 ntBASIC4.55□□□□□ -1.68
MT-ND1P03886 AC097505.1-201ENST00000610199 565 ntBASIC4.55□□□□□ -1.68
MT-ND1P03886 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC4.55□□□□□ -1.68
MT-ND1P03886 AC099494.2-201ENST00000623371 978 ntBASIC4.55□□□□□ -1.68
MT-ND1P03886 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.55□□□□□ -1.68
MT-ND1P03886 AC091948.2-201ENST00000636510 279 ntBASIC4.55□□□□□ -1.68
MT-ND1P03886 ECM1P2-201ENST00000503354 1577 ntBASIC4.55□□□□□ -1.68
MT-ND1P03886 FTO-203ENST00000460382 1517 ntTSL 5 BASIC4.55□□□□□ -1.68
MT-ND1P03886 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
MT-ND1P03886 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
MT-ND1P03886 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.54□□□□□ -1.68
MT-ND1P03886 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.54□□□□□ -1.68
MT-ND1P03886 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
MT-ND1P03886 MTND4P21-201ENST00000453886 1357 ntBASIC4.54□□□□□ -1.68
MT-ND1P03886 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
MT-ND1P03886 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC4.54□□□□□ -1.68
MT-ND1P03886 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC4.54□□□□□ -1.68
MT-ND1P03886 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.54□□□□□ -1.68
MT-ND1P03886 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
MT-ND1P03886 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
MT-ND1P03886 AL445437.1-201ENST00000623157 3087 ntBASIC4.54□□□□□ -1.68
MT-ND1P03886 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
MT-ND1P03886 RNU4-44P-201ENST00000363050 141 ntBASIC4.54□□□□□ -1.68
MT-ND1P03886 RN7SKP162-201ENST00000363605 345 ntBASIC4.54□□□□□ -1.68
MT-ND1P03886 U3.25-201ENST00000391209 220 ntBASIC4.54□□□□□ -1.68
MT-ND1P03886 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.54□□□□□ -1.68
MT-ND1P03886 RPL26P37-201ENST00000411983 438 ntBASIC4.54□□□□□ -1.68
MT-ND1P03886 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC4.54□□□□□ -1.68
MT-ND1P03886 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.54□□□□□ -1.68
MT-ND1P03886 AL512504.1-201ENST00000415494 778 ntBASIC4.54□□□□□ -1.68
MT-ND1P03886 DDX39BP1-205ENST00000422507 192 ntBASIC4.54□□□□□ -1.68
MT-ND1P03886 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.54□□□□□ -1.68
MT-ND1P03886 CR848007.2-201ENST00000424918 787 ntBASIC4.54□□□□□ -1.68
MT-ND1P03886 RPS26P47-201ENST00000427219 348 ntBASIC4.54□□□□□ -1.68
MT-ND1P03886 AL606490.7-201ENST00000433136 191 ntBASIC4.54□□□□□ -1.68
MT-ND1P03886 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.54□□□□□ -1.68
MT-ND1P03886 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
MT-ND1P03886 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC4.54□□□□□ -1.68
MT-ND1P03886 AC092447.2-201ENST00000435487 669 ntBASIC4.54□□□□□ -1.68
MT-ND1P03886 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.54□□□□□ -1.68
MT-ND1P03886 AL627224.1-201ENST00000448334 444 ntBASIC4.54□□□□□ -1.68
MT-ND1P03886 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC4.54□□□□□ -1.68
MT-ND1P03886 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms