Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
COL2A1P02458 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
COL2A1P02458 ST7-212ENST00000422922 1887 ntTSL 5 BASIC5.37□□□□□ -1.55
COL2A1P02458 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
COL2A1P02458 AL391684.1-202ENST00000641293 1636 ntBASIC5.36□□□□□ -1.55
COL2A1P02458 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
COL2A1P02458 AL079305.1-201ENST00000623159 3008 ntBASIC5.36□□□□□ -1.55
COL2A1P02458 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
COL2A1P02458 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.36□□□□□ -1.55
COL2A1P02458 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
COL2A1P02458 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
COL2A1P02458 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
COL2A1P02458 OR5P1P-201ENST00000299512 925 ntBASIC5.36□□□□□ -1.55
COL2A1P02458 RNA5SP187-201ENST00000384400 119 ntBASIC5.36□□□□□ -1.55
COL2A1P02458 SNORA70C-201ENST00000384538 135 ntBASIC5.36□□□□□ -1.55
COL2A1P02458 AC240504.1-201ENST00000395709 845 ntBASIC5.36□□□□□ -1.55
COL2A1P02458 ATP5F1P2-201ENST00000398143 760 ntBASIC5.36□□□□□ -1.55
COL2A1P02458 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC5.36□□□□□ -1.55
COL2A1P02458 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC5.36□□□□□ -1.55
COL2A1P02458 RPL21P43-201ENST00000425440 472 ntBASIC5.36□□□□□ -1.55
COL2A1P02458 VTI1BP4-201ENST00000427516 527 ntBASIC5.36□□□□□ -1.55
COL2A1P02458 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC5.36□□□□□ -1.55
COL2A1P02458 SCP2-206ENST00000430330 938 ntTSL 2 BASIC5.36□□□□□ -1.55
COL2A1P02458 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC5.36□□□□□ -1.55
COL2A1P02458 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC5.36□□□□□ -1.55
COL2A1P02458 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC5.36□□□□□ -1.55
COL2A1P02458 RPL23AP43-201ENST00000446445 471 ntBASIC5.36□□□□□ -1.55
COL2A1P02458 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC5.36□□□□□ -1.55
COL2A1P02458 FPGT-203ENST00000467578 601 ntTSL 2 BASIC5.36□□□□□ -1.55
COL2A1P02458 RN7SL303P-201ENST00000469773 251 ntBASIC5.36□□□□□ -1.55
COL2A1P02458 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC5.36□□□□□ -1.55
COL2A1P02458 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
COL2A1P02458 AC090286.3-201ENST00000573133 187 ntBASIC5.36□□□□□ -1.55
COL2A1P02458 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC5.36□□□□□ -1.55
COL2A1P02458 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC5.36□□□□□ -1.55
COL2A1P02458 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.36□□□□□ -1.55
COL2A1P02458 AL109620.1-201ENST00000618738 1197 ntBASIC5.36□□□□□ -1.55
COL2A1P02458 MAPK10-349ENST00000641767 3661 ntBASIC5.36□□□□□ -1.55
COL2A1P02458 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC5.36□□□□□ -1.55
COL2A1P02458 AP000473.2-201ENST00000602659 1537 ntBASIC5.36□□□□□ -1.55
COL2A1P02458 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
COL2A1P02458 AL731566.1-201ENST00000620490 1937 ntBASIC5.35□□□□□ -1.55
COL2A1P02458 EIF2AP4-201ENST00000424793 1781 ntBASIC5.35□□□□□ -1.55
COL2A1P02458 AC090017.1-201ENST00000548612 1779 ntBASIC5.35□□□□□ -1.55
COL2A1P02458 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.35□□□□□ -1.55
COL2A1P02458 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
COL2A1P02458 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.35□□□□□ -1.55
COL2A1P02458 EPGN-201ENST00000332112 847 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
COL2A1P02458 UBBP2-201ENST00000376781 231 ntBASIC5.35□□□□□ -1.55
COL2A1P02458 RNU1-13P-201ENST00000384499 162 ntBASIC5.35□□□□□ -1.55
COL2A1P02458 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC5.35□□□□□ -1.55
COL2A1P02458 RPL21P108-201ENST00000413857 481 ntBASIC5.35□□□□□ -1.55
COL2A1P02458 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC5.35□□□□□ -1.55
COL2A1P02458 AC011998.1-201ENST00000433403 117 ntBASIC5.35□□□□□ -1.55
COL2A1P02458 RPS3AP54-201ENST00000435535 734 ntBASIC5.35□□□□□ -1.55
COL2A1P02458 RPL7P33-201ENST00000444159 742 ntBASIC5.35□□□□□ -1.55
COL2A1P02458 AL157385.1-201ENST00000446973 268 ntBASIC5.35□□□□□ -1.55
COL2A1P02458 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC5.35□□□□□ -1.55
COL2A1P02458 AC090686.1-201ENST00000481577 749 ntBASIC5.35□□□□□ -1.55
COL2A1P02458 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.35□□□□□ -1.55
COL2A1P02458 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC5.35□□□□□ -1.55
COL2A1P02458 SNORA67.7-201ENST00000516664 135 ntBASIC5.35□□□□□ -1.55
COL2A1P02458 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC5.35□□□□□ -1.55
COL2A1P02458 OR8A2P-201ENST00000528631 952 ntBASIC5.35□□□□□ -1.55
COL2A1P02458 TRAV8-5-201ENST00000537369 341 ntBASIC5.35□□□□□ -1.55
COL2A1P02458 AC015804.1-201ENST00000622935 435 ntBASIC5.35□□□□□ -1.55
COL2A1P02458 AC112200.1-201ENST00000625015 234 ntBASIC5.35□□□□□ -1.55
COL2A1P02458 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC5.35□□□□□ -1.55
COL2A1P02458 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
COL2A1P02458 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
COL2A1P02458 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.35□□□□□ -1.55
COL2A1P02458 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
COL2A1P02458 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.34□□□□□ -1.55
COL2A1P02458 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
COL2A1P02458 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
COL2A1P02458 AC008033.1-201ENST00000216407 1162 ntBASIC5.34□□□□□ -1.55
COL2A1P02458 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
COL2A1P02458 RNU6-761P-201ENST00000384148 107 ntBASIC5.34□□□□□ -1.55
COL2A1P02458 RPS12P10-201ENST00000427031 377 ntBASIC5.34□□□□□ -1.55
COL2A1P02458 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.34□□□□□ -1.55
COL2A1P02458 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC5.34□□□□□ -1.55
COL2A1P02458 NFYAP1-201ENST00000431953 972 ntBASIC5.34□□□□□ -1.55
COL2A1P02458 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC5.34□□□□□ -1.55
COL2A1P02458 NMNAT1P2-201ENST00000435192 860 ntBASIC5.34□□□□□ -1.55
COL2A1P02458 AC004938.1-201ENST00000438468 308 ntBASIC5.34□□□□□ -1.55
COL2A1P02458 RPL7P19-201ENST00000469948 618 ntBASIC5.34□□□□□ -1.55
COL2A1P02458 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC5.34□□□□□ -1.55
COL2A1P02458 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC5.34□□□□□ -1.55
COL2A1P02458 AP000889.1-201ENST00000530968 660 ntBASIC5.34□□□□□ -1.55
COL2A1P02458 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.34□□□□□ -1.55
COL2A1P02458 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
COL2A1P02458 BPIFA4P-203ENST00000603168 689 ntBASIC5.34□□□□□ -1.55
COL2A1P02458 AP000240.1-201ENST00000609910 452 ntBASIC5.34□□□□□ -1.55
COL2A1P02458 AL445567.2-201ENST00000618935 498 ntBASIC5.34□□□□□ -1.55
COL2A1P02458 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC5.34□□□□□ -1.55
COL2A1P02458 AP000843.1-201ENST00000624880 701 ntBASIC5.34□□□□□ -1.55
COL2A1P02458 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
COL2A1P02458 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
COL2A1P02458 AC025031.4-201ENST00000621248 3271 ntBASIC5.34□□□□□ -1.55
COL2A1P02458 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms