Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
CUX2O14529 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC7.98□□□□□ -1.13
CUX2O14529 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC7.98□□□□□ -1.13
CUX2O14529 AC004980.3-201ENST00000447046 365 ntBASIC7.98□□□□□ -1.13
CUX2O14529 AL162151.2-201ENST00000448875 158 ntBASIC7.98□□□□□ -1.13
CUX2O14529 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC7.98□□□□□ -1.13
CUX2O14529 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC7.98□□□□□ -1.13
CUX2O14529 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC7.98□□□□□ -1.13
CUX2O14529 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC7.98□□□□□ -1.13
CUX2O14529 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC7.98□□□□□ -1.13
CUX2O14529 UQCRC2P1-201ENST00000417777 1332 ntBASIC7.98□□□□□ -1.13
CUX2O14529 MAPK10-328ENST00000641553 4009 ntBASIC7.98□□□□□ -1.13
CUX2O14529 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC7.98□□□□□ -1.13
CUX2O14529 DDX18P6-201ENST00000450119 1997 ntBASIC7.97□□□□□ -1.13
CUX2O14529 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
CUX2O14529 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
CUX2O14529 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC7.97□□□□□ -1.13
CUX2O14529 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
CUX2O14529 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
CUX2O14529 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
CUX2O14529 RPL7P58-201ENST00000402913 758 ntBASIC7.97□□□□□ -1.13
CUX2O14529 RPL12P9-201ENST00000412942 488 ntBASIC7.97□□□□□ -1.13
CUX2O14529 CYCSP43-201ENST00000438233 310 ntBASIC7.97□□□□□ -1.13
CUX2O14529 AC073052.1-201ENST00000440417 714 ntBASIC7.97□□□□□ -1.13
CUX2O14529 RPS27AP13-201ENST00000498403 237 ntBASIC7.97□□□□□ -1.13
CUX2O14529 RPL23AP94-201ENST00000512518 302 ntBASIC7.97□□□□□ -1.13
CUX2O14529 RNU1-103P-201ENST00000516502 125 ntBASIC7.97□□□□□ -1.13
CUX2O14529 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC7.97□□□□□ -1.13
CUX2O14529 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC7.97□□□□□ -1.13
CUX2O14529 CASP1-216ENST00000534497 825 ntTSL 5 BASIC7.97□□□□□ -1.13
CUX2O14529 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC7.97□□□□□ -1.13
CUX2O14529 AP001160.4-201ENST00000596971 382 ntBASIC7.97□□□□□ -1.13
CUX2O14529 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC7.97□□□□□ -1.13
CUX2O14529 AC096553.1-201ENST00000605169 829 ntBASIC7.97□□□□□ -1.13
CUX2O14529 AL159169.3-201ENST00000608871 561 ntBASIC7.97□□□□□ -1.13
CUX2O14529 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
CUX2O14529 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC7.97□□□□□ -1.13
CUX2O14529 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
CUX2O14529 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
CUX2O14529 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC7.96□□□□□ -1.13
CUX2O14529 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
CUX2O14529 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC7.96□□□□□ -1.13
CUX2O14529 SNORA73.2-201ENST00000364946 201 ntBASIC7.96□□□□□ -1.13
CUX2O14529 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC7.96□□□□□ -1.13
CUX2O14529 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC7.96□□□□□ -1.13
CUX2O14529 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC7.96□□□□□ -1.13
CUX2O14529 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC7.96□□□□□ -1.13
CUX2O14529 ACTR3BP4-201ENST00000503033 1244 ntBASIC7.96□□□□□ -1.13
CUX2O14529 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC7.96□□□□□ -1.13
CUX2O14529 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC7.96□□□□□ -1.13
CUX2O14529 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC7.96□□□□□ -1.13
CUX2O14529 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC7.96□□□□□ -1.13
CUX2O14529 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC7.96□□□□□ -1.13
CUX2O14529 AC037471.2-201ENST00000564941 598 ntBASIC7.96□□□□□ -1.13
CUX2O14529 MRPS21P9-201ENST00000571150 257 ntBASIC7.96□□□□□ -1.13
CUX2O14529 AP003497.2-201ENST00000624220 967 ntBASIC7.96□□□□□ -1.13
CUX2O14529 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC7.96□□□□□ -1.14
CUX2O14529 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC7.96□□□□□ -1.14
CUX2O14529 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC7.96□□□□□ -1.14
CUX2O14529 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC7.96□□□□□ -1.14
CUX2O14529 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
CUX2O14529 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC7.96□□□□□ -1.14
CUX2O14529 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
CUX2O14529 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC7.96□□□□□ -1.14
CUX2O14529 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
CUX2O14529 AC058791.1-201ENST00000608412 3198 ntBASIC7.96□□□□□ -1.14
CUX2O14529 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
CUX2O14529 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC7.96□□□□□ -1.14
CUX2O14529 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
CUX2O14529 AC140134.1-201ENST00000511830 3544 ntBASIC7.95□□□□□ -1.14
CUX2O14529 OR12D3-201ENST00000396806 1869 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
CUX2O14529 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
CUX2O14529 AC021146.4-201ENST00000309229 279 ntBASIC7.95□□□□□ -1.14
CUX2O14529 RPL21P65-201ENST00000406094 466 ntBASIC7.95□□□□□ -1.14
CUX2O14529 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC7.95□□□□□ -1.14
CUX2O14529 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC7.95□□□□□ -1.14
CUX2O14529 BTF3P10-201ENST00000433415 495 ntBASIC7.95□□□□□ -1.14
CUX2O14529 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC7.95□□□□□ -1.14
CUX2O14529 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
CUX2O14529 RN7SL600P-201ENST00000581811 299 ntBASIC7.95□□□□□ -1.14
CUX2O14529 AL121932.1-201ENST00000605542 214 ntBASIC7.95□□□□□ -1.14
CUX2O14529 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC7.95□□□□□ -1.14
CUX2O14529 AL442067.2-201ENST00000614033 363 ntBASIC7.95□□□□□ -1.14
CUX2O14529 AL139254.3-201ENST00000641097 674 ntBASIC7.95□□□□□ -1.14
CUX2O14529 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
CUX2O14529 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
CUX2O14529 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC7.95□□□□□ -1.14
CUX2O14529 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
CUX2O14529 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC7.95□□□□□ -1.14
CUX2O14529 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC7.95□□□□□ -1.14
CUX2O14529 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC7.95□□□□□ -1.14
CUX2O14529 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
CUX2O14529 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC7.95□□□□□ -1.14
CUX2O14529 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC7.95□□□□□ -1.14
CUX2O14529 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC7.95□□□□□ -1.14
CUX2O14529 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC7.95□□□□□ -1.14
CUX2O14529 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC7.95□□□□□ -1.14
CUX2O14529 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC7.95□□□□□ -1.14
CUX2O14529 AMPD1-203ENST00000520113 2375 ntAPPRIS P3 TSL 1 (best) BASIC7.94□□□□□ -1.14
CUX2O14529 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 130.7 ms