Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.54□□□□□ -1.52
TRIM38O00635 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TRIM38O00635 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC5.54□□□□□ -1.52
TRIM38O00635 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.54□□□□□ -1.52
TRIM38O00635 AC091057.2-201ENST00000602594 792 ntBASIC5.54□□□□□ -1.52
TRIM38O00635 ELOCP35-201ENST00000604289 336 ntBASIC5.54□□□□□ -1.52
TRIM38O00635 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC5.54□□□□□ -1.52
TRIM38O00635 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.54□□□□□ -1.52
TRIM38O00635 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC5.54□□□□□ -1.52
TRIM38O00635 AC022306.2-201ENST00000617563 647 ntBASIC5.54□□□□□ -1.52
TRIM38O00635 AC084824.4-201ENST00000620106 731 ntBASIC5.54□□□□□ -1.52
TRIM38O00635 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
TRIM38O00635 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TRIM38O00635 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
TRIM38O00635 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
TRIM38O00635 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.54□□□□□ -1.52
TRIM38O00635 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TRIM38O00635 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TRIM38O00635 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
TRIM38O00635 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.54□□□□□ -1.52
TRIM38O00635 MAPK10-328ENST00000641553 4009 ntBASIC5.54□□□□□ -1.52
TRIM38O00635 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TRIM38O00635 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC5.54□□□□□ -1.52
TRIM38O00635 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM38O00635 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.53□□□□□ -1.52
TRIM38O00635 ABCC13-202ENST00000463099 3842 ntBASIC5.53□□□□□ -1.52
TRIM38O00635 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM38O00635 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM38O00635 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.53□□□□□ -1.52
TRIM38O00635 AC092079.1-201ENST00000558620 1985 ntBASIC5.53□□□□□ -1.52
TRIM38O00635 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
TRIM38O00635 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
TRIM38O00635 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC5.53□□□□□ -1.52
TRIM38O00635 RNU5B-1-201ENST00000363286 116 ntBASIC5.53□□□□□ -1.52
TRIM38O00635 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.53□□□□□ -1.52
TRIM38O00635 MIR223-201ENST00000385204 110 ntBASIC5.53□□□□□ -1.52
TRIM38O00635 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
TRIM38O00635 RNU6-298P-201ENST00000390888 96 ntBASIC5.53□□□□□ -1.52
TRIM38O00635 AC005042.1-201ENST00000393397 800 ntBASIC5.53□□□□□ -1.52
TRIM38O00635 HMGB3P18-201ENST00000406327 590 ntBASIC5.53□□□□□ -1.52
TRIM38O00635 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.53□□□□□ -1.52
TRIM38O00635 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.53□□□□□ -1.52
TRIM38O00635 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.53□□□□□ -1.52
TRIM38O00635 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.53□□□□□ -1.52
TRIM38O00635 AC004854.1-201ENST00000440356 349 ntBASIC5.53□□□□□ -1.52
TRIM38O00635 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC5.53□□□□□ -1.52
TRIM38O00635 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC5.53□□□□□ -1.52
TRIM38O00635 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC5.53□□□□□ -1.52
TRIM38O00635 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.53□□□□□ -1.52
TRIM38O00635 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC5.53□□□□□ -1.52
TRIM38O00635 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC5.53□□□□□ -1.52
TRIM38O00635 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.53□□□□□ -1.52
TRIM38O00635 TPT1P1-201ENST00000458495 518 ntBASIC5.53□□□□□ -1.52
TRIM38O00635 RN7SL172P-201ENST00000460535 303 ntBASIC5.53□□□□□ -1.52
TRIM38O00635 RPL21P6-201ENST00000479171 504 ntBASIC5.53□□□□□ -1.52
TRIM38O00635 RN7SL826P-201ENST00000479724 288 ntBASIC5.53□□□□□ -1.52
TRIM38O00635 RPL7P39-201ENST00000481157 744 ntBASIC5.53□□□□□ -1.52
TRIM38O00635 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC5.53□□□□□ -1.52
TRIM38O00635 AC147055.3-201ENST00000510547 851 ntBASIC5.53□□□□□ -1.52
TRIM38O00635 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC5.53□□□□□ -1.52
TRIM38O00635 RPS27AP18-201ENST00000515536 459 ntBASIC5.53□□□□□ -1.52
TRIM38O00635 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.53□□□□□ -1.52
TRIM38O00635 CDC42P3-201ENST00000518493 633 ntBASIC5.53□□□□□ -1.52
TRIM38O00635 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC5.53□□□□□ -1.52
TRIM38O00635 HMGB1P1-201ENST00000522557 636 ntBASIC5.53□□□□□ -1.52
TRIM38O00635 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.53□□□□□ -1.52
TRIM38O00635 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.53□□□□□ -1.52
TRIM38O00635 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC5.53□□□□□ -1.52
TRIM38O00635 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC5.53□□□□□ -1.52
TRIM38O00635 ZKSCAN7P1-201ENST00000543668 673 ntBASIC5.53□□□□□ -1.52
TRIM38O00635 AL359219.2-201ENST00000555184 348 ntBASIC5.53□□□□□ -1.52
TRIM38O00635 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.53□□□□□ -1.52
TRIM38O00635 AL049838.1-201ENST00000563647 981 ntBASIC5.53□□□□□ -1.52
TRIM38O00635 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC5.53□□□□□ -1.52
TRIM38O00635 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.53□□□□□ -1.52
TRIM38O00635 MIR4660-201ENST00000583549 74 ntBASIC5.53□□□□□ -1.52
TRIM38O00635 AC110760.3-201ENST00000598794 467 ntBASIC5.53□□□□□ -1.52
TRIM38O00635 AC125494.3-201ENST00000602759 455 ntBASIC5.53□□□□□ -1.52
TRIM38O00635 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC5.53□□□□□ -1.52
TRIM38O00635 Z99289.3-201ENST00000605586 594 ntBASIC5.53□□□□□ -1.52
TRIM38O00635 AL121652.1-201ENST00000608851 448 ntBASIC5.53□□□□□ -1.52
TRIM38O00635 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC5.53□□□□□ -1.52
TRIM38O00635 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.53□□□□□ -1.52
TRIM38O00635 AC004943.3-201ENST00000624116 600 ntBASIC5.53□□□□□ -1.52
TRIM38O00635 AL049536.1-201ENST00000625043 744 ntBASIC5.53□□□□□ -1.52
TRIM38O00635 AL590396.4-201ENST00000636779 956 ntBASIC5.53□□□□□ -1.52
TRIM38O00635 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM38O00635 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.53□□□□□ -1.52
TRIM38O00635 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM38O00635 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC5.53□□□□□ -1.52
TRIM38O00635 AC106754.1-201ENST00000562632 1513 ntBASIC5.53□□□□□ -1.52
TRIM38O00635 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
TRIM38O00635 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TRIM38O00635 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TRIM38O00635 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.52□□□□□ -1.53
TRIM38O00635 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TRIM38O00635 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TRIM38O00635 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
TRIM38O00635 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
TRIM38O00635 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms