Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 RNU6-709P-201ENST00000517257 104 ntBASIC4.7□□□□□ -1.66
SLC28A1O00337 IGLVIV-64-201ENST00000518581 301 ntBASIC4.7□□□□□ -1.66
SLC28A1O00337 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SLC28A1O00337 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC4.7□□□□□ -1.66
SLC28A1O00337 SNRPGP1-201ENST00000553864 222 ntBASIC4.7□□□□□ -1.66
SLC28A1O00337 AC087477.6-201ENST00000559595 843 ntBASIC4.7□□□□□ -1.66
SLC28A1O00337 AC084759.1-201ENST00000561168 290 ntBASIC4.7□□□□□ -1.66
SLC28A1O00337 AC023158.1-201ENST00000561632 1025 ntBASIC4.7□□□□□ -1.66
SLC28A1O00337 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC4.7□□□□□ -1.66
SLC28A1O00337 AL353662.3-201ENST00000625131 237 ntBASIC4.7□□□□□ -1.66
SLC28A1O00337 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SLC28A1O00337 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SLC28A1O00337 AL133268.1-201ENST00000405676 1401 ntBASIC4.7□□□□□ -1.66
SLC28A1O00337 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.7□□□□□ -1.66
SLC28A1O00337 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SLC28A1O00337 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.7□□□□□ -1.66
SLC28A1O00337 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
SLC28A1O00337 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SLC28A1O00337 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.69□□□□□ -1.66
SLC28A1O00337 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SLC28A1O00337 BTBD10P1-201ENST00000549824 1352 ntBASIC4.69□□□□□ -1.66
SLC28A1O00337 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SLC28A1O00337 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.69□□□□□ -1.66
SLC28A1O00337 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SLC28A1O00337 RNU6-666P-201ENST00000363499 107 ntBASIC4.69□□□□□ -1.66
SLC28A1O00337 MIR223-201ENST00000385204 110 ntBASIC4.69□□□□□ -1.66
SLC28A1O00337 MIR320B1-201ENST00000390209 79 ntBASIC4.69□□□□□ -1.66
SLC28A1O00337 AL357515.1-201ENST00000402967 542 ntBASIC4.69□□□□□ -1.66
SLC28A1O00337 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.69□□□□□ -1.66
SLC28A1O00337 Z86062.1-201ENST00000406773 777 ntBASIC4.69□□□□□ -1.66
SLC28A1O00337 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.69□□□□□ -1.66
SLC28A1O00337 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.69□□□□□ -1.66
SLC28A1O00337 TBCAP2-201ENST00000416175 326 ntBASIC4.69□□□□□ -1.66
SLC28A1O00337 AF186996.5-201ENST00000418098 904 ntBASIC4.69□□□□□ -1.66
SLC28A1O00337 E2F6P2-201ENST00000420708 748 ntBASIC4.69□□□□□ -1.66
SLC28A1O00337 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SLC28A1O00337 AL451139.1-201ENST00000434718 346 ntBASIC4.69□□□□□ -1.66
SLC28A1O00337 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.69□□□□□ -1.66
SLC28A1O00337 BTBD7P2-201ENST00000441962 620 ntBASIC4.69□□□□□ -1.66
SLC28A1O00337 FHP1-201ENST00000442741 703 ntBASIC4.69□□□□□ -1.66
SLC28A1O00337 AL137845.2-201ENST00000444292 988 ntBASIC4.69□□□□□ -1.66
SLC28A1O00337 AC000111.2-201ENST00000448200 210 ntBASIC4.69□□□□□ -1.66
SLC28A1O00337 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC4.69□□□□□ -1.66
SLC28A1O00337 RN7SL319P-201ENST00000480656 221 ntBASIC4.69□□□□□ -1.66
SLC28A1O00337 AC116562.1-201ENST00000485355 781 ntBASIC4.69□□□□□ -1.66
SLC28A1O00337 RN7SL30P-201ENST00000488416 306 ntBASIC4.69□□□□□ -1.66
SLC28A1O00337 AC072052.1-201ENST00000496556 306 ntBASIC4.69□□□□□ -1.66
SLC28A1O00337 SUMO1P1-201ENST00000497904 306 ntBASIC4.69□□□□□ -1.66
SLC28A1O00337 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SLC28A1O00337 AC093890.1-201ENST00000502554 540 ntBASIC4.69□□□□□ -1.66
SLC28A1O00337 ATP5LP3-201ENST00000514223 304 ntBASIC4.69□□□□□ -1.66
SLC28A1O00337 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
SLC28A1O00337 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.69□□□□□ -1.66
SLC28A1O00337 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.69□□□□□ -1.66
SLC28A1O00337 AC090022.1-201ENST00000546569 311 ntBASIC4.69□□□□□ -1.66
SLC28A1O00337 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
SLC28A1O00337 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.69□□□□□ -1.66
SLC28A1O00337 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.69□□□□□ -1.66
SLC28A1O00337 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.69□□□□□ -1.66
SLC28A1O00337 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.69□□□□□ -1.66
SLC28A1O00337 MIR4310-201ENST00000582950 57 ntBASIC4.69□□□□□ -1.66
SLC28A1O00337 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.69□□□□□ -1.66
SLC28A1O00337 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC4.69□□□□□ -1.66
SLC28A1O00337 AC242628.1-201ENST00000606810 391 ntBASIC4.69□□□□□ -1.66
SLC28A1O00337 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.69□□□□□ -1.66
SLC28A1O00337 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC4.69□□□□□ -1.66
SLC28A1O00337 TEX41-254ENST00000626394 423 ntTSL 5 BASIC4.69□□□□□ -1.66
SLC28A1O00337 TMEM30CP-203ENST00000637814 1035 ntBASIC4.69□□□□□ -1.66
SLC28A1O00337 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
SLC28A1O00337 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
SLC28A1O00337 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.69□□□□□ -1.66
SLC28A1O00337 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SLC28A1O00337 SALL4P2-201ENST00000423288 2910 ntBASIC4.69□□□□□ -1.66
SLC28A1O00337 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SLC28A1O00337 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SLC28A1O00337 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SLC28A1O00337 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SLC28A1O00337 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.68□□□□□ -1.66
SLC28A1O00337 AC009501.3-201ENST00000605001 1352 ntBASIC4.68□□□□□ -1.66
SLC28A1O00337 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SLC28A1O00337 LINC01355-201ENST00000566551 5444 ntBASIC4.68□□□□□ -1.66
SLC28A1O00337 SCN1A-220ENST00000641603 12506 ntBASIC4.68□□□□□ -1.66
SLC28A1O00337 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.68□□□□□ -1.66
SLC28A1O00337 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SLC28A1O00337 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
SLC28A1O00337 RNU4-44P-201ENST00000363050 141 ntBASIC4.68□□□□□ -1.66
SLC28A1O00337 RNA5SP455-201ENST00000365190 119 ntBASIC4.68□□□□□ -1.66
SLC28A1O00337 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SLC28A1O00337 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.68□□□□□ -1.66
SLC28A1O00337 LSM5-206ENST00000409987 504 ntTSL 5 BASIC4.68□□□□□ -1.66
SLC28A1O00337 RNA5SP345-201ENST00000410646 108 ntBASIC4.68□□□□□ -1.66
SLC28A1O00337 AP000534.2-201ENST00000412729 568 ntBASIC4.68□□□□□ -1.66
SLC28A1O00337 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.68□□□□□ -1.66
SLC28A1O00337 ZFAND6P1-201ENST00000434138 605 ntBASIC4.68□□□□□ -1.66
SLC28A1O00337 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.68□□□□□ -1.66
SLC28A1O00337 RPS15AP29-201ENST00000445539 400 ntBASIC4.68□□□□□ -1.66
SLC28A1O00337 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SLC28A1O00337 RPL7AP52-201ENST00000458096 790 ntBASIC4.68□□□□□ -1.66
SLC28A1O00337 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.68□□□□□ -1.66
SLC28A1O00337 AC092691.2-201ENST00000461787 803 ntBASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms