Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 RN7SKP293-201ENST00000411389 296 ntBASIC5.06□□□□□ -1.6
CCDC188H7C350 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC5.06□□□□□ -1.6
CCDC188H7C350 AC009237.10-201ENST00000414112 510 ntBASIC5.06□□□□□ -1.6
CCDC188H7C350 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC5.06□□□□□ -1.6
CCDC188H7C350 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.06□□□□□ -1.6
CCDC188H7C350 PPIAP13-201ENST00000434706 478 ntBASIC5.06□□□□□ -1.6
CCDC188H7C350 AL451139.1-201ENST00000434718 346 ntBASIC5.06□□□□□ -1.6
CCDC188H7C350 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
CCDC188H7C350 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.06□□□□□ -1.6
CCDC188H7C350 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.06□□□□□ -1.6
CCDC188H7C350 AL354710.1-201ENST00000453641 246 ntBASIC5.06□□□□□ -1.6
CCDC188H7C350 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
CCDC188H7C350 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC188H7C350 AC022795.1-201ENST00000473808 480 ntBASIC5.06□□□□□ -1.6
CCDC188H7C350 RPS4XP18-201ENST00000495480 763 ntBASIC5.06□□□□□ -1.6
CCDC188H7C350 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC5.06□□□□□ -1.6
CCDC188H7C350 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.06□□□□□ -1.6
CCDC188H7C350 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC5.06□□□□□ -1.6
CCDC188H7C350 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC5.06□□□□□ -1.6
CCDC188H7C350 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.06□□□□□ -1.6
CCDC188H7C350 AC004923.2-201ENST00000529649 369 ntBASIC5.06□□□□□ -1.6
CCDC188H7C350 GSTP1P1-201ENST00000548078 319 ntBASIC5.06□□□□□ -1.6
CCDC188H7C350 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC5.06□□□□□ -1.6
CCDC188H7C350 AC022884.3-201ENST00000579571 248 ntBASIC5.06□□□□□ -1.6
CCDC188H7C350 AC007448.1-201ENST00000582714 234 ntBASIC5.06□□□□□ -1.6
CCDC188H7C350 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC5.06□□□□□ -1.6
CCDC188H7C350 AC008521.2-201ENST00000591021 259 ntBASIC5.06□□□□□ -1.6
CCDC188H7C350 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.06□□□□□ -1.6
CCDC188H7C350 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC5.06□□□□□ -1.6
CCDC188H7C350 AC110792.4-201ENST00000609843 298 ntBASIC5.06□□□□□ -1.6
CCDC188H7C350 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.06□□□□□ -1.6
CCDC188H7C350 AL121890.2-201ENST00000617644 465 ntBASIC5.06□□□□□ -1.6
CCDC188H7C350 MIR6729-201ENST00000618194 65 ntBASIC5.06□□□□□ -1.6
CCDC188H7C350 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC5.06□□□□□ -1.6
CCDC188H7C350 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC5.06□□□□□ -1.6
CCDC188H7C350 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.06□□□□□ -1.6
CCDC188H7C350 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.06□□□□□ -1.6
CCDC188H7C350 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
CCDC188H7C350 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.06□□□□□ -1.6
CCDC188H7C350 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC188H7C350 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC188H7C350 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.06□□□□□ -1.6
CCDC188H7C350 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC188H7C350 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC5.06□□□□□ -1.6
CCDC188H7C350 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC5.05□□□□□ -1.6
CCDC188H7C350 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC188H7C350 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
CCDC188H7C350 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC5.05□□□□□ -1.6
CCDC188H7C350 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC188H7C350 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC188H7C350 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC188H7C350 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC188H7C350 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC188H7C350 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC188H7C350 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC5.05□□□□□ -1.6
CCDC188H7C350 RNU6-225P-201ENST00000384613 103 ntBASIC5.05□□□□□ -1.6
CCDC188H7C350 MIR921-201ENST00000401133 56 ntBASIC5.05□□□□□ -1.6
CCDC188H7C350 LSM5-205ENST00000409952 687 ntTSL 4 BASIC5.05□□□□□ -1.6
CCDC188H7C350 LSM5-206ENST00000409987 504 ntTSL 5 BASIC5.05□□□□□ -1.6
CCDC188H7C350 RNA5SP345-201ENST00000410646 108 ntBASIC5.05□□□□□ -1.6
CCDC188H7C350 RNA5SP498-201ENST00000411342 120 ntBASIC5.05□□□□□ -1.6
CCDC188H7C350 AC004448.2-201ENST00000422360 586 ntBASIC5.05□□□□□ -1.6
CCDC188H7C350 MTATP6P11-201ENST00000428071 670 ntBASIC5.05□□□□□ -1.6
CCDC188H7C350 XKRY2-201ENST00000442362 1093 ntBASIC5.05□□□□□ -1.6
CCDC188H7C350 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC5.05□□□□□ -1.6
CCDC188H7C350 AC073109.1-201ENST00000445066 978 ntBASIC5.05□□□□□ -1.6
CCDC188H7C350 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC5.05□□□□□ -1.6
CCDC188H7C350 AC243772.1-201ENST00000451620 410 ntBASIC5.05□□□□□ -1.6
CCDC188H7C350 AC005008.1-201ENST00000456151 612 ntBASIC5.05□□□□□ -1.6
CCDC188H7C350 AC097484.1-201ENST00000471148 389 ntBASIC5.05□□□□□ -1.6
CCDC188H7C350 RN7SL817P-201ENST00000480777 288 ntBASIC5.05□□□□□ -1.6
CCDC188H7C350 RN7SL97P-201ENST00000486780 299 ntBASIC5.05□□□□□ -1.6
CCDC188H7C350 AC107398.1-201ENST00000486904 505 ntBASIC5.05□□□□□ -1.6
CCDC188H7C350 RPL7P51-201ENST00000490532 749 ntBASIC5.05□□□□□ -1.6
CCDC188H7C350 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC188H7C350 AC108120.2-201ENST00000512973 294 ntBASIC5.05□□□□□ -1.6
CCDC188H7C350 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC5.05□□□□□ -1.6
CCDC188H7C350 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC5.05□□□□□ -1.6
CCDC188H7C350 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.05□□□□□ -1.6
CCDC188H7C350 IGKV3D-34-201ENST00000522638 302 ntBASIC5.05□□□□□ -1.6
CCDC188H7C350 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.05□□□□□ -1.6
CCDC188H7C350 OR8K2P-201ENST00000524645 927 ntBASIC5.05□□□□□ -1.6
CCDC188H7C350 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC5.05□□□□□ -1.6
CCDC188H7C350 AL049870.4-201ENST00000555741 486 ntBASIC5.05□□□□□ -1.6
CCDC188H7C350 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC5.05□□□□□ -1.6
CCDC188H7C350 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC5.05□□□□□ -1.6
CCDC188H7C350 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.05□□□□□ -1.6
CCDC188H7C350 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC5.05□□□□□ -1.6
CCDC188H7C350 AL359513.1-201ENST00000614364 557 ntBASIC5.05□□□□□ -1.6
CCDC188H7C350 AC007204.2-201ENST00000615022 616 ntBASIC5.05□□□□□ -1.6
CCDC188H7C350 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.05□□□□□ -1.6
CCDC188H7C350 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC5.05□□□□□ -1.6
CCDC188H7C350 AC136428.4-201ENST00000634254 1155 ntBASIC5.05□□□□□ -1.6
CCDC188H7C350 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC188H7C350 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.05□□□□□ -1.6
CCDC188H7C350 AC027228.2-201ENST00000567141 2154 ntBASIC5.05□□□□□ -1.6
CCDC188H7C350 EOGT-210ENST00000615922 1931 ntBASIC5.05□□□□□ -1.6
CCDC188H7C350 AC011493.1-201ENST00000596753 1632 ntBASIC5.05□□□□□ -1.6
CCDC188H7C350 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC188H7C350 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms