Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 ABCD3-202ENST00000370214 3538 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
PCDHB11Q9Y5F2 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC7.03□□□□□ -1.28
PCDHB11Q9Y5F2 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC7.03□□□□□ -1.28
PCDHB11Q9Y5F2 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC7.03□□□□□ -1.28
PCDHB11Q9Y5F2 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC7.03□□□□□ -1.28
PCDHB11Q9Y5F2 PFKFB1-203ENST00000545676 1591 ntTSL 2 BASIC7.03□□□□□ -1.28
PCDHB11Q9Y5F2 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC7.03□□□□□ -1.28
PCDHB11Q9Y5F2 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
PCDHB11Q9Y5F2 NXPE3-203ENST00000477909 3450 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
PCDHB11Q9Y5F2 DNM1L-202ENST00000358214 3229 ntTSL 5 BASIC7.03□□□□□ -1.28
PCDHB11Q9Y5F2 PHLDB2-202ENST00000393925 5543 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.28
PCDHB11Q9Y5F2 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.28
PCDHB11Q9Y5F2 OR52I1-202ENST00000530443 2961 ntAPPRIS P1 BASIC7.02□□□□□ -1.28
PCDHB11Q9Y5F2 CLEC3A-201ENST00000299642 1971 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
PCDHB11Q9Y5F2 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC7.02□□□□□ -1.29
PCDHB11Q9Y5F2 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
PCDHB11Q9Y5F2 ANGPT2-204ENST00000629816 2602 ntAPPRIS ALT1 TSL 1 (best) BASIC7.02□□□□□ -1.29
PCDHB11Q9Y5F2 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC7.02□□□□□ -1.29
PCDHB11Q9Y5F2 BTN3A2-205ENST00000508906 3733 ntAPPRIS ALT2 TSL 2 BASIC7.02□□□□□ -1.29
PCDHB11Q9Y5F2 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC7.02□□□□□ -1.29
PCDHB11Q9Y5F2 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
PCDHB11Q9Y5F2 RNU4-81P-201ENST00000363561 144 ntBASIC7.02□□□□□ -1.29
PCDHB11Q9Y5F2 SNORA4.3-201ENST00000365564 137 ntBASIC7.02□□□□□ -1.29
PCDHB11Q9Y5F2 RNU6-657P-201ENST00000383904 107 ntBASIC7.02□□□□□ -1.29
PCDHB11Q9Y5F2 Y_RNA.384-201ENST00000383909 102 ntBASIC7.02□□□□□ -1.29
PCDHB11Q9Y5F2 SNORA70.8-201ENST00000384231 136 ntBASIC7.02□□□□□ -1.29
PCDHB11Q9Y5F2 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
PCDHB11Q9Y5F2 AL356967.1-201ENST00000406305 431 ntBASIC7.02□□□□□ -1.29
PCDHB11Q9Y5F2 AC099535.1-201ENST00000408928 371 ntBASIC7.02□□□□□ -1.29
PCDHB11Q9Y5F2 AL357752.1-201ENST00000412817 349 ntBASIC7.02□□□□□ -1.29
PCDHB11Q9Y5F2 AL121776.1-201ENST00000429337 372 ntBASIC7.02□□□□□ -1.29
PCDHB11Q9Y5F2 AC016691.1-201ENST00000441321 413 ntBASIC7.02□□□□□ -1.29
PCDHB11Q9Y5F2 AC004593.1-201ENST00000446246 798 ntTSL 3 BASIC7.02□□□□□ -1.29
PCDHB11Q9Y5F2 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC7.02□□□□□ -1.29
PCDHB11Q9Y5F2 SRP68P2-201ENST00000456184 254 ntBASIC7.02□□□□□ -1.29
PCDHB11Q9Y5F2 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC7.02□□□□□ -1.29
PCDHB11Q9Y5F2 RNU7-136P-201ENST00000458819 69 ntBASIC7.02□□□□□ -1.29
PCDHB11Q9Y5F2 RN7SL649P-201ENST00000496974 275 ntBASIC7.02□□□□□ -1.29
PCDHB11Q9Y5F2 AC008967.1-201ENST00000504843 163 ntBASIC7.02□□□□□ -1.29
PCDHB11Q9Y5F2 AC055733.3-201ENST00000505214 523 ntBASIC7.02□□□□□ -1.29
PCDHB11Q9Y5F2 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC7.02□□□□□ -1.29
PCDHB11Q9Y5F2 RN7SKP283-201ENST00000517197 270 ntBASIC7.02□□□□□ -1.29
PCDHB11Q9Y5F2 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC7.02□□□□□ -1.29
PCDHB11Q9Y5F2 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC7.02□□□□□ -1.29
PCDHB11Q9Y5F2 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC7.02□□□□□ -1.29
PCDHB11Q9Y5F2 AP000442.2-201ENST00000531108 440 ntTSL 3 BASIC7.02□□□□□ -1.29
PCDHB11Q9Y5F2 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC7.02□□□□□ -1.29
PCDHB11Q9Y5F2 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC7.02□□□□□ -1.29
PCDHB11Q9Y5F2 ANP32BP1-202ENST00000568553 737 ntBASIC7.02□□□□□ -1.29
PCDHB11Q9Y5F2 AC005668.1-201ENST00000571142 476 ntBASIC7.02□□□□□ -1.29
PCDHB11Q9Y5F2 MIR5186-201ENST00000577504 120 ntBASIC7.02□□□□□ -1.29
PCDHB11Q9Y5F2 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC7.02□□□□□ -1.29
PCDHB11Q9Y5F2 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC7.02□□□□□ -1.29
PCDHB11Q9Y5F2 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC7.02□□□□□ -1.29
PCDHB11Q9Y5F2 AC008638.3-201ENST00000603341 463 ntBASIC7.02□□□□□ -1.29
PCDHB11Q9Y5F2 AC078899.5-201ENST00000612475 178 ntBASIC7.02□□□□□ -1.29
PCDHB11Q9Y5F2 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC7.02□□□□□ -1.29
PCDHB11Q9Y5F2 EFCAB8-204ENST00000618684 435 ntTSL 5 BASIC7.02□□□□□ -1.29
PCDHB11Q9Y5F2 AC078909.2-201ENST00000620584 398 ntBASIC7.02□□□□□ -1.29
PCDHB11Q9Y5F2 AC211433.3-201ENST00000623770 375 ntBASIC7.02□□□□□ -1.29
PCDHB11Q9Y5F2 AC009161.2-201ENST00000624626 138 ntBASIC7.02□□□□□ -1.29
PCDHB11Q9Y5F2 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC7.02□□□□□ -1.29
PCDHB11Q9Y5F2 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC7.02□□□□□ -1.29
PCDHB11Q9Y5F2 NRCAM-204ENST00000379028 6685 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
PCDHB11Q9Y5F2 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
PCDHB11Q9Y5F2 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC7.02□□□□□ -1.29
PCDHB11Q9Y5F2 RMST-210ENST00000640149 2844 ntTSL 5 BASIC7.02□□□□□ -1.29
PCDHB11Q9Y5F2 SERPINB13-202ENST00000344731 3114 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
PCDHB11Q9Y5F2 DDX18P4-201ENST00000511690 1966 ntBASIC7.02□□□□□ -1.29
PCDHB11Q9Y5F2 AGXT2-201ENST00000231420 2364 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
PCDHB11Q9Y5F2 CTAGE11P-201ENST00000451540 2353 ntBASIC7.02□□□□□ -1.29
PCDHB11Q9Y5F2 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC7.02□□□□□ -1.29
PCDHB11Q9Y5F2 STXBP5-203ENST00000367480 3297 ntTSL 5 BASIC7.02□□□□□ -1.29
PCDHB11Q9Y5F2 ACTR3BP2-202ENST00000623630 1338 ntBASIC7.01□□□□□ -1.29
PCDHB11Q9Y5F2 AL117339.5-201ENST00000640275 3955 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
PCDHB11Q9Y5F2 PRLR-219ENST00000619676 1402 ntTSL 5 BASIC7.01□□□□□ -1.29
PCDHB11Q9Y5F2 LINC02447-201ENST00000499242 1500 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
PCDHB11Q9Y5F2 DCP1B-205ENST00000540622 1547 ntTSL 5 BASIC7.01□□□□□ -1.29
PCDHB11Q9Y5F2 LARP1B-203ENST00000432347 2707 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
PCDHB11Q9Y5F2 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC7.01□□□□□ -1.29
PCDHB11Q9Y5F2 TNPO1-204ENST00000506351 3028 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
PCDHB11Q9Y5F2 OR9I1-203ENST00000641478 3027 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
PCDHB11Q9Y5F2 CD163-202ENST00000396620 3800 ntAPPRIS ALT2 TSL 2 BASIC7.01□□□□□ -1.29
PCDHB11Q9Y5F2 UTY-212ENST00000545955 6817 ntAPPRIS P5 TSL 1 (best) BASIC7.01□□□□□ -1.29
PCDHB11Q9Y5F2 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC7.01□□□□□ -1.29
PCDHB11Q9Y5F2 PBLD-204ENST00000358769 2587 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
PCDHB11Q9Y5F2 SLC16A4-202ENST00000369781 2082 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
PCDHB11Q9Y5F2 RGS7-201ENST00000348120 1980 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
PCDHB11Q9Y5F2 AC091305.2-201ENST00000624049 1576 ntBASIC7.01□□□□□ -1.29
PCDHB11Q9Y5F2 RNU6-456P-201ENST00000384493 107 ntBASIC7.01□□□□□ -1.29
PCDHB11Q9Y5F2 RNU6-510P-201ENST00000391239 108 ntBASIC7.01□□□□□ -1.29
PCDHB11Q9Y5F2 RNU1-56P-201ENST00000391303 164 ntBASIC7.01□□□□□ -1.29
PCDHB11Q9Y5F2 FAUP2-201ENST00000394301 401 ntBASIC7.01□□□□□ -1.29
PCDHB11Q9Y5F2 MRPL42P2-201ENST00000403169 426 ntBASIC7.01□□□□□ -1.29
PCDHB11Q9Y5F2 HMGB1P17-201ENST00000403495 628 ntBASIC7.01□□□□□ -1.29
PCDHB11Q9Y5F2 RN7SKP240-201ENST00000410583 375 ntBASIC7.01□□□□□ -1.29
PCDHB11Q9Y5F2 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC7.01□□□□□ -1.29
PCDHB11Q9Y5F2 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC7.01□□□□□ -1.29
PCDHB11Q9Y5F2 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC7.01□□□□□ -1.29
PCDHB11Q9Y5F2 AC104837.2-201ENST00000427236 424 ntBASIC7.01□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms