Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 CCDC62-203ENST00000392440 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.01
PCDHB13Q9Y5F0 FTO-222ENST00000637969 2889 ntTSL 5 BASIC8.71□□□□□ -1.01
PCDHB13Q9Y5F0 RIPOR2-208ENST00000613507 5539 ntAPPRIS P4 TSL 5 BASIC8.71□□□□□ -1.01
PCDHB13Q9Y5F0 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.01
PCDHB13Q9Y5F0 OR2A5-202ENST00000641693 8681 ntAPPRIS P1 BASIC8.71□□□□□ -1.01
PCDHB13Q9Y5F0 AC093010.2-202ENST00000493033 3023 ntTSL 2 BASIC8.71□□□□□ -1.01
PCDHB13Q9Y5F0 MAGEB18-201ENST00000325250 1811 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
PCDHB13Q9Y5F0 AMPD3-204ENST00000444303 3994 ntTSL 2 BASIC8.71□□□□□ -1.01
PCDHB13Q9Y5F0 KPNA1-201ENST00000344337 6830 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
PCDHB13Q9Y5F0 HSP90AB2P-201ENST00000507090 2176 ntBASIC8.71□□□□□ -1.01
PCDHB13Q9Y5F0 PTBP3-204ENST00000374255 3413 ntAPPRIS P3 TSL 5 BASIC8.71□□□□□ -1.01
PCDHB13Q9Y5F0 LINC01132-201ENST00000437601 3793 ntTSL 4 BASIC8.71□□□□□ -1.02
PCDHB13Q9Y5F0 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
PCDHB13Q9Y5F0 ZNF200-203ENST00000396871 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.02
PCDHB13Q9Y5F0 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
PCDHB13Q9Y5F0 Y_RNA.26-201ENST00000362539 101 ntBASIC8.71□□□□□ -1.02
PCDHB13Q9Y5F0 Y_RNA.64-201ENST00000362845 102 ntBASIC8.71□□□□□ -1.02
PCDHB13Q9Y5F0 AL450124.1-201ENST00000376401 353 ntBASIC8.71□□□□□ -1.02
PCDHB13Q9Y5F0 PDHA1-202ENST00000379804 709 ntTSL 2 BASIC8.71□□□□□ -1.02
PCDHB13Q9Y5F0 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
PCDHB13Q9Y5F0 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC8.71□□□□□ -1.02
PCDHB13Q9Y5F0 SMIM2-201ENST00000400419 822 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
PCDHB13Q9Y5F0 MIR548H3-201ENST00000408771 118 ntBASIC8.71□□□□□ -1.02
PCDHB13Q9Y5F0 AC099535.1-201ENST00000408928 371 ntBASIC8.71□□□□□ -1.02
PCDHB13Q9Y5F0 RPS6KA2-IT1-201ENST00000416770 579 ntTSL 3 BASIC8.71□□□□□ -1.02
PCDHB13Q9Y5F0 DAZAP2-202ENST00000425012 1117 ntTSL 2 BASIC8.71□□□□□ -1.02
PCDHB13Q9Y5F0 HMGA1P4-201ENST00000428643 334 ntTSL 2 BASIC8.71□□□□□ -1.02
PCDHB13Q9Y5F0 AC084809.2-201ENST00000444464 512 ntTSL 2 BASIC8.71□□□□□ -1.02
PCDHB13Q9Y5F0 RPL36AP15-201ENST00000444514 266 ntBASIC8.71□□□□□ -1.02
PCDHB13Q9Y5F0 AL445687.2-201ENST00000458156 728 ntBASIC8.71□□□□□ -1.02
PCDHB13Q9Y5F0 RN7SL587P-201ENST00000459853 281 ntBASIC8.71□□□□□ -1.02
PCDHB13Q9Y5F0 RPL23AP12-201ENST00000467573 473 ntBASIC8.71□□□□□ -1.02
PCDHB13Q9Y5F0 ZBTB20-AS4-201ENST00000472323 675 ntTSL 3 BASIC8.71□□□□□ -1.02
PCDHB13Q9Y5F0 GRHL1-206ENST00000480736 572 ntTSL 4 BASIC8.71□□□□□ -1.02
PCDHB13Q9Y5F0 RPS4XP14-201ENST00000493072 781 ntBASIC8.71□□□□□ -1.02
PCDHB13Q9Y5F0 RN7SL124P-201ENST00000498656 285 ntBASIC8.71□□□□□ -1.02
PCDHB13Q9Y5F0 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC8.71□□□□□ -1.02
PCDHB13Q9Y5F0 NTAN1P2-201ENST00000515730 940 ntBASIC8.71□□□□□ -1.02
PCDHB13Q9Y5F0 AC011853.1-201ENST00000518911 454 ntBASIC8.71□□□□□ -1.02
PCDHB13Q9Y5F0 AP006587.2-201ENST00000530696 493 ntBASIC8.71□□□□□ -1.02
PCDHB13Q9Y5F0 AP000907.2-201ENST00000530827 353 ntBASIC8.71□□□□□ -1.02
PCDHB13Q9Y5F0 TMEM132D-AS1-204ENST00000537367 531 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
PCDHB13Q9Y5F0 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC8.71□□□□□ -1.02
PCDHB13Q9Y5F0 LSM3P2-201ENST00000551246 273 ntBASIC8.71□□□□□ -1.02
PCDHB13Q9Y5F0 AC016526.1-201ENST00000555465 520 ntTSL 3 BASIC8.71□□□□□ -1.02
PCDHB13Q9Y5F0 LINC01588-213ENST00000557142 492 ntTSL 3 BASIC8.71□□□□□ -1.02
PCDHB13Q9Y5F0 AC006441.3-201ENST00000580121 456 ntTSL 4 BASIC8.71□□□□□ -1.02
PCDHB13Q9Y5F0 ADGRF5P1-202ENST00000590130 980 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
PCDHB13Q9Y5F0 RPS11-202ENST00000594493 575 ntTSL 3 BASIC8.71□□□□□ -1.02
PCDHB13Q9Y5F0 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC8.71□□□□□ -1.02
PCDHB13Q9Y5F0 AC003002.3-201ENST00000597410 521 ntAPPRIS P1 TSL 3 BASIC8.71□□□□□ -1.02
PCDHB13Q9Y5F0 AC093063.1-201ENST00000599317 363 ntBASIC8.71□□□□□ -1.02
PCDHB13Q9Y5F0 AC245028.3-201ENST00000618197 285 ntBASIC8.71□□□□□ -1.02
PCDHB13Q9Y5F0 AC012100.3-201ENST00000624738 575 ntBASIC8.71□□□□□ -1.02
PCDHB13Q9Y5F0 RASGRP3-202ENST00000403687 4807 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.02
PCDHB13Q9Y5F0 PART1-203ENST00000515734 2569 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
PCDHB13Q9Y5F0 HRH1-203ENST00000431010 4278 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
PCDHB13Q9Y5F0 GJB2-201ENST00000382844 2309 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
PCDHB13Q9Y5F0 DTNA-225ENST00000595022 6016 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.02
PCDHB13Q9Y5F0 ZNF567-204ENST00000588311 2042 ntTSL 2 BASIC8.71□□□□□ -1.02
PCDHB13Q9Y5F0 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC8.71□□□□□ -1.02
PCDHB13Q9Y5F0 HKR1-203ENST00000541583 2758 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
PCDHB13Q9Y5F0 LINC02208-201ENST00000506769 2803 ntTSL 5 BASIC8.71□□□□□ -1.02
PCDHB13Q9Y5F0 SLC26A9-202ENST00000367134 4616 ntTSL 5 BASIC8.71□□□□□ -1.02
PCDHB13Q9Y5F0 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
PCDHB13Q9Y5F0 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC8.7□□□□□ -1.02
PCDHB13Q9Y5F0 TNS4-201ENST00000254051 4067 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
PCDHB13Q9Y5F0 AC016930.1-201ENST00000468766 2205 ntBASIC8.7□□□□□ -1.02
PCDHB13Q9Y5F0 OCLN-205ENST00000538151 5391 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
PCDHB13Q9Y5F0 GABRQ-201ENST00000598523 6172 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
PCDHB13Q9Y5F0 PICALM-201ENST00000356360 1958 ntTSL 5 BASIC8.7□□□□□ -1.02
PCDHB13Q9Y5F0 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC8.7□□□□□ -1.02
PCDHB13Q9Y5F0 METTL2A-204ENST00000616852 3150 ntTSL 2 BASIC8.7□□□□□ -1.02
PCDHB13Q9Y5F0 APP-209ENST00000440126 2846 ntTSL 2 BASIC8.7□□□□□ -1.02
PCDHB13Q9Y5F0 RAB11A-201ENST00000261890 4930 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
PCDHB13Q9Y5F0 PIWIL2-205ENST00000611073 2864 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
PCDHB13Q9Y5F0 RNU6-343P-201ENST00000364709 104 ntBASIC8.7□□□□□ -1.02
PCDHB13Q9Y5F0 Y_RNA.539-201ENST00000384635 107 ntBASIC8.7□□□□□ -1.02
PCDHB13Q9Y5F0 MIR558-201ENST00000384920 94 ntBASIC8.7□□□□□ -1.02
PCDHB13Q9Y5F0 SLC2A11-205ENST00000403208 564 ntTSL 4 BASIC8.7□□□□□ -1.02
PCDHB13Q9Y5F0 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC8.7□□□□□ -1.02
PCDHB13Q9Y5F0 AC068533.1-201ENST00000418542 415 ntBASIC8.7□□□□□ -1.02
PCDHB13Q9Y5F0 AC096632.1-201ENST00000427395 310 ntBASIC8.7□□□□□ -1.02
PCDHB13Q9Y5F0 KRT18P53-201ENST00000431919 117 ntBASIC8.7□□□□□ -1.02
PCDHB13Q9Y5F0 AL133396.1-201ENST00000432048 687 ntBASIC8.7□□□□□ -1.02
PCDHB13Q9Y5F0 AC092802.3-201ENST00000434207 420 ntTSL 3 BASIC8.7□□□□□ -1.02
PCDHB13Q9Y5F0 RBMY2NP-201ENST00000434454 1028 ntBASIC8.7□□□□□ -1.02
PCDHB13Q9Y5F0 AC099799.1-201ENST00000439809 192 ntBASIC8.7□□□□□ -1.02
PCDHB13Q9Y5F0 AC074257.1-201ENST00000446340 585 ntTSL 4 BASIC8.7□□□□□ -1.02
PCDHB13Q9Y5F0 RPS12P20-201ENST00000464109 380 ntBASIC8.7□□□□□ -1.02
PCDHB13Q9Y5F0 RPL23AP72-201ENST00000492447 435 ntBASIC8.7□□□□□ -1.02
PCDHB13Q9Y5F0 AC111198.1-201ENST00000505575 606 ntTSL 4 BASIC8.7□□□□□ -1.02
PCDHB13Q9Y5F0 IL7-206ENST00000520269 456 ntTSL 3 BASIC8.7□□□□□ -1.02
PCDHB13Q9Y5F0 AC078899.1-201ENST00000521432 1185 ntBASIC8.7□□□□□ -1.02
PCDHB13Q9Y5F0 AP003032.2-201ENST00000533697 686 ntTSL 3 BASIC8.7□□□□□ -1.02
PCDHB13Q9Y5F0 AC079362.1-202ENST00000547089 278 ntTSL 3 BASIC8.7□□□□□ -1.02
PCDHB13Q9Y5F0 CRTC3-AS1-201ENST00000558105 502 ntTSL 5 BASIC8.7□□□□□ -1.02
PCDHB13Q9Y5F0 IGHV1OR15-4-201ENST00000560037 348 ntBASIC8.7□□□□□ -1.02
PCDHB13Q9Y5F0 FRG2IP-201ENST00000563581 781 ntBASIC8.7□□□□□ -1.02
PCDHB13Q9Y5F0 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC8.7□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms