Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 AC079791.1-201ENST00000605356 973 ntBASIC4.65□□□□□ -1.67
RNF6Q9Y252 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC4.65□□□□□ -1.67
RNF6Q9Y252 AC097505.1-201ENST00000610199 565 ntBASIC4.65□□□□□ -1.67
RNF6Q9Y252 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC4.65□□□□□ -1.67
RNF6Q9Y252 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC4.65□□□□□ -1.67
RNF6Q9Y252 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
RNF6Q9Y252 SCN1A-220ENST00000641603 12506 ntBASIC4.65□□□□□ -1.67
RNF6Q9Y252 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
RNF6Q9Y252 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.65□□□□□ -1.67
RNF6Q9Y252 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.67
RNF6Q9Y252 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
RNF6Q9Y252 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
RNF6Q9Y252 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
RNF6Q9Y252 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.64□□□□□ -1.67
RNF6Q9Y252 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.64□□□□□ -1.67
RNF6Q9Y252 AL133268.1-201ENST00000405676 1401 ntBASIC4.64□□□□□ -1.67
RNF6Q9Y252 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
RNF6Q9Y252 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.64□□□□□ -1.67
RNF6Q9Y252 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
RNF6Q9Y252 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.64□□□□□ -1.67
RNF6Q9Y252 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
RNF6Q9Y252 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
RNF6Q9Y252 AC107068.1-201ENST00000563286 4218 ntBASIC4.64□□□□□ -1.67
RNF6Q9Y252 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
RNF6Q9Y252 U3.3-201ENST00000362986 216 ntBASIC4.64□□□□□ -1.67
RNF6Q9Y252 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
RNF6Q9Y252 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
RNF6Q9Y252 RNU6-152P-201ENST00000384037 107 ntBASIC4.64□□□□□ -1.67
RNF6Q9Y252 NUDT19P3-201ENST00000404698 555 ntBASIC4.64□□□□□ -1.67
RNF6Q9Y252 RPL26P29-201ENST00000415623 438 ntBASIC4.64□□□□□ -1.67
RNF6Q9Y252 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.64□□□□□ -1.67
RNF6Q9Y252 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.64□□□□□ -1.67
RNF6Q9Y252 AC006065.1-201ENST00000422539 802 ntBASIC4.64□□□□□ -1.67
RNF6Q9Y252 RPS4XP16-201ENST00000427198 791 ntBASIC4.64□□□□□ -1.67
RNF6Q9Y252 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.64□□□□□ -1.67
RNF6Q9Y252 AC093716.1-201ENST00000435923 377 ntBASIC4.64□□□□□ -1.67
RNF6Q9Y252 AL606490.8-201ENST00000441624 319 ntBASIC4.64□□□□□ -1.67
RNF6Q9Y252 CEACAMP9-201ENST00000442990 513 ntBASIC4.64□□□□□ -1.67
RNF6Q9Y252 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.64□□□□□ -1.67
RNF6Q9Y252 RSL24D1P2-201ENST00000445584 366 ntBASIC4.64□□□□□ -1.67
RNF6Q9Y252 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
RNF6Q9Y252 AC006463.2-201ENST00000473326 348 ntBASIC4.64□□□□□ -1.67
RNF6Q9Y252 ARL4AP1-201ENST00000503220 705 ntBASIC4.64□□□□□ -1.67
RNF6Q9Y252 PCNAP1-201ENST00000505363 709 ntBASIC4.64□□□□□ -1.67
RNF6Q9Y252 RFPL4AP5-201ENST00000514977 504 ntBASIC4.64□□□□□ -1.67
RNF6Q9Y252 RPS27AP18-201ENST00000515536 459 ntBASIC4.64□□□□□ -1.67
RNF6Q9Y252 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.64□□□□□ -1.67
RNF6Q9Y252 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.64□□□□□ -1.67
RNF6Q9Y252 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.64□□□□□ -1.67
RNF6Q9Y252 AC087888.1-201ENST00000550884 1254 ntBASIC4.64□□□□□ -1.67
RNF6Q9Y252 NDUFB4P11-201ENST00000560510 395 ntBASIC4.64□□□□□ -1.67
RNF6Q9Y252 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.64□□□□□ -1.67
RNF6Q9Y252 AC116553.2-201ENST00000564203 463 ntBASIC4.64□□□□□ -1.67
RNF6Q9Y252 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.64□□□□□ -1.67
RNF6Q9Y252 MIR4330-201ENST00000579077 105 ntBASIC4.64□□□□□ -1.67
RNF6Q9Y252 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.64□□□□□ -1.67
RNF6Q9Y252 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.64□□□□□ -1.67
RNF6Q9Y252 AC073111.2-201ENST00000605657 1075 ntBASIC4.64□□□□□ -1.67
RNF6Q9Y252 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC4.64□□□□□ -1.67
RNF6Q9Y252 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC4.64□□□□□ -1.67
RNF6Q9Y252 AC135068.12-201ENST00000637370 931 ntBASIC4.64□□□□□ -1.67
RNF6Q9Y252 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
RNF6Q9Y252 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
RNF6Q9Y252 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
RNF6Q9Y252 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.64□□□□□ -1.67
RNF6Q9Y252 TTC39DP-201ENST00000416781 1688 ntBASIC4.64□□□□□ -1.67
RNF6Q9Y252 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
RNF6Q9Y252 AC012618.3-205ENST00000637896 1496 ntBASIC4.63□□□□□ -1.67
RNF6Q9Y252 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
RNF6Q9Y252 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
RNF6Q9Y252 RNU4-44P-201ENST00000363050 141 ntBASIC4.63□□□□□ -1.67
RNF6Q9Y252 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
RNF6Q9Y252 CYB5AP4-201ENST00000396692 399 ntBASIC4.63□□□□□ -1.67
RNF6Q9Y252 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.63□□□□□ -1.67
RNF6Q9Y252 COX6B1P1-201ENST00000415962 213 ntBASIC4.63□□□□□ -1.67
RNF6Q9Y252 AL807761.1-201ENST00000417622 171 ntBASIC4.63□□□□□ -1.67
RNF6Q9Y252 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.63□□□□□ -1.67
RNF6Q9Y252 DDX39BP1-205ENST00000422507 192 ntBASIC4.63□□□□□ -1.67
RNF6Q9Y252 EI24P4-201ENST00000423683 1078 ntBASIC4.63□□□□□ -1.67
RNF6Q9Y252 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.63□□□□□ -1.67
RNF6Q9Y252 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.63□□□□□ -1.67
RNF6Q9Y252 RHEBP2-201ENST00000450289 600 ntBASIC4.63□□□□□ -1.67
RNF6Q9Y252 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.63□□□□□ -1.67
RNF6Q9Y252 AC108751.2-201ENST00000469993 231 ntBASIC4.63□□□□□ -1.67
RNF6Q9Y252 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.63□□□□□ -1.67
RNF6Q9Y252 RPL7P16-201ENST00000479738 738 ntBASIC4.63□□□□□ -1.67
RNF6Q9Y252 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC4.63□□□□□ -1.67
RNF6Q9Y252 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC4.63□□□□□ -1.67
RNF6Q9Y252 SNORA48.9-201ENST00000516419 162 ntBASIC4.63□□□□□ -1.67
RNF6Q9Y252 RN7SKP260-201ENST00000516907 149 ntBASIC4.63□□□□□ -1.67
RNF6Q9Y252 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.63□□□□□ -1.67
RNF6Q9Y252 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC4.63□□□□□ -1.67
RNF6Q9Y252 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC4.63□□□□□ -1.67
RNF6Q9Y252 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.63□□□□□ -1.67
RNF6Q9Y252 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.63□□□□□ -1.67
RNF6Q9Y252 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC4.63□□□□□ -1.67
RNF6Q9Y252 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.63□□□□□ -1.67
RNF6Q9Y252 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC4.63□□□□□ -1.67
RNF6Q9Y252 AC090953.1-201ENST00000604305 1092 ntBASIC4.63□□□□□ -1.67
RNF6Q9Y252 AP005432.2-201ENST00000608162 586 ntBASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms