Protein–RNA interactions for Protein: Q9UKS6

PACSIN3, Protein kinase C and casein kinase substrate in neurons protein 3, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3Q9UKS6 MCTS2P-201ENST00000394552 546 ntBASIC5.44□□□□□ -1.54
PACSIN3Q9UKS6 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
PACSIN3Q9UKS6 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.44□□□□□ -1.54
PACSIN3Q9UKS6 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.44□□□□□ -1.54
PACSIN3Q9UKS6 AC008173.1-201ENST00000418901 264 ntBASIC5.44□□□□□ -1.54
PACSIN3Q9UKS6 RPS3P2-201ENST00000421346 701 ntBASIC5.44□□□□□ -1.54
PACSIN3Q9UKS6 IPPKP1-201ENST00000422501 768 ntBASIC5.44□□□□□ -1.54
PACSIN3Q9UKS6 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC5.44□□□□□ -1.54
PACSIN3Q9UKS6 AP000936.2-201ENST00000447151 681 ntBASIC5.44□□□□□ -1.54
PACSIN3Q9UKS6 OTX2P1-201ENST00000450956 354 ntBASIC5.44□□□□□ -1.54
PACSIN3Q9UKS6 HLA-DPA3-207ENST00000454398 229 ntBASIC5.44□□□□□ -1.54
PACSIN3Q9UKS6 RNU6-599P-201ENST00000459383 107 ntBASIC5.44□□□□□ -1.54
PACSIN3Q9UKS6 RNU6-1193P-201ENST00000459461 107 ntBASIC5.44□□□□□ -1.54
PACSIN3Q9UKS6 BZW1P2-201ENST00000473537 826 ntBASIC5.44□□□□□ -1.54
PACSIN3Q9UKS6 AC092865.4-201ENST00000477936 615 ntBASIC5.44□□□□□ -1.54
PACSIN3Q9UKS6 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC5.44□□□□□ -1.54
PACSIN3Q9UKS6 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.44□□□□□ -1.54
PACSIN3Q9UKS6 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC5.44□□□□□ -1.54
PACSIN3Q9UKS6 AC026414.1-201ENST00000504046 698 ntBASIC5.44□□□□□ -1.54
PACSIN3Q9UKS6 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC5.44□□□□□ -1.54
PACSIN3Q9UKS6 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PACSIN3Q9UKS6 SEPT10P1-201ENST00000517342 1162 ntBASIC5.44□□□□□ -1.54
PACSIN3Q9UKS6 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC5.44□□□□□ -1.54
PACSIN3Q9UKS6 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.44□□□□□ -1.54
PACSIN3Q9UKS6 AC060788.1-201ENST00000521318 469 ntBASIC5.44□□□□□ -1.54
PACSIN3Q9UKS6 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.44□□□□□ -1.54
PACSIN3Q9UKS6 IGLV3-30-201ENST00000524362 298 ntBASIC5.44□□□□□ -1.54
PACSIN3Q9UKS6 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.44□□□□□ -1.54
PACSIN3Q9UKS6 PDCL2P2-201ENST00000533651 189 ntBASIC5.44□□□□□ -1.54
PACSIN3Q9UKS6 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.44□□□□□ -1.54
PACSIN3Q9UKS6 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PACSIN3Q9UKS6 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC5.44□□□□□ -1.54
PACSIN3Q9UKS6 NANOGNBP2-201ENST00000544753 553 ntBASIC5.44□□□□□ -1.54
PACSIN3Q9UKS6 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC5.44□□□□□ -1.54
PACSIN3Q9UKS6 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC5.44□□□□□ -1.54
PACSIN3Q9UKS6 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC5.44□□□□□ -1.54
PACSIN3Q9UKS6 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC5.44□□□□□ -1.54
PACSIN3Q9UKS6 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC5.44□□□□□ -1.54
PACSIN3Q9UKS6 ACTR3BP3-201ENST00000565577 979 ntBASIC5.44□□□□□ -1.54
PACSIN3Q9UKS6 AC106734.1-201ENST00000568646 663 ntBASIC5.44□□□□□ -1.54
PACSIN3Q9UKS6 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.44□□□□□ -1.54
PACSIN3Q9UKS6 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.44□□□□□ -1.54
PACSIN3Q9UKS6 MTND4LP24-201ENST00000572277 291 ntBASIC5.44□□□□□ -1.54
PACSIN3Q9UKS6 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.44□□□□□ -1.54
PACSIN3Q9UKS6 CBX3P2-202ENST00000583365 535 ntBASIC5.44□□□□□ -1.54
PACSIN3Q9UKS6 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5.44□□□□□ -1.54
PACSIN3Q9UKS6 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.44□□□□□ -1.54
PACSIN3Q9UKS6 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC5.44□□□□□ -1.54
PACSIN3Q9UKS6 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
PACSIN3Q9UKS6 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC5.44□□□□□ -1.54
PACSIN3Q9UKS6 AC072039.2-201ENST00000608883 439 ntBASIC5.44□□□□□ -1.54
PACSIN3Q9UKS6 AL138478.1-201ENST00000612252 832 ntBASIC5.44□□□□□ -1.54
PACSIN3Q9UKS6 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.44□□□□□ -1.54
PACSIN3Q9UKS6 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
PACSIN3Q9UKS6 U6.42-201ENST00000618440 107 ntBASIC5.44□□□□□ -1.54
PACSIN3Q9UKS6 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.44□□□□□ -1.54
PACSIN3Q9UKS6 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.44□□□□□ -1.54
PACSIN3Q9UKS6 RNU6-368P-201ENST00000620928 107 ntBASIC5.44□□□□□ -1.54
PACSIN3Q9UKS6 RNU6-538P-201ENST00000622329 107 ntBASIC5.44□□□□□ -1.54
PACSIN3Q9UKS6 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.44□□□□□ -1.54
PACSIN3Q9UKS6 AC073488.3-201ENST00000631611 778 ntBASIC5.44□□□□□ -1.54
PACSIN3Q9UKS6 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.44□□□□□ -1.54
PACSIN3Q9UKS6 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.44□□□□□ -1.54
PACSIN3Q9UKS6 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PACSIN3Q9UKS6 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
PACSIN3Q9UKS6 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.44□□□□□ -1.54
PACSIN3Q9UKS6 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PACSIN3Q9UKS6 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PACSIN3Q9UKS6 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
PACSIN3Q9UKS6 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
PACSIN3Q9UKS6 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
PACSIN3Q9UKS6 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
PACSIN3Q9UKS6 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PACSIN3Q9UKS6 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PACSIN3Q9UKS6 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.43□□□□□ -1.54
PACSIN3Q9UKS6 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.43□□□□□ -1.54
PACSIN3Q9UKS6 AC073136.1-201ENST00000449426 2884 ntBASIC5.43□□□□□ -1.54
PACSIN3Q9UKS6 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PACSIN3Q9UKS6 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PACSIN3Q9UKS6 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PACSIN3Q9UKS6 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
PACSIN3Q9UKS6 SELENOWP1-201ENST00000322792 252 ntBASIC5.43□□□□□ -1.54
PACSIN3Q9UKS6 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
PACSIN3Q9UKS6 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
PACSIN3Q9UKS6 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
PACSIN3Q9UKS6 AL121886.1-201ENST00000358609 435 ntBASIC5.43□□□□□ -1.54
PACSIN3Q9UKS6 RNU6-694P-201ENST00000364071 147 ntBASIC5.43□□□□□ -1.54
PACSIN3Q9UKS6 RNU6-304P-201ENST00000364855 107 ntBASIC5.43□□□□□ -1.54
PACSIN3Q9UKS6 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
PACSIN3Q9UKS6 RNU5A-2P-201ENST00000384337 116 ntBASIC5.43□□□□□ -1.54
PACSIN3Q9UKS6 RNU6-1215P-201ENST00000384441 102 ntBASIC5.43□□□□□ -1.54
PACSIN3Q9UKS6 MIR323B-201ENST00000385269 82 ntBASIC5.43□□□□□ -1.54
PACSIN3Q9UKS6 MIR130A-201ENST00000385274 89 ntBASIC5.43□□□□□ -1.54
PACSIN3Q9UKS6 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PACSIN3Q9UKS6 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.43□□□□□ -1.54
PACSIN3Q9UKS6 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC5.43□□□□□ -1.54
PACSIN3Q9UKS6 RPL35AP3-201ENST00000414680 288 ntBASIC5.43□□□□□ -1.54
PACSIN3Q9UKS6 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.43□□□□□ -1.54
PACSIN3Q9UKS6 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC5.43□□□□□ -1.54
PACSIN3Q9UKS6 AC019178.2-201ENST00000423595 505 ntBASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms