Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CISHQ9NSE2 AP001002.1-201ENST00000625148 1513 ntBASIC4.82□□□□□ -1.64
CISHQ9NSE2 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.81□□□□□ -1.64
CISHQ9NSE2 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CISHQ9NSE2 ICE2P1-201ENST00000512800 1849 ntBASIC4.81□□□□□ -1.64
CISHQ9NSE2 AC116158.1-201ENST00000560231 2129 ntBASIC4.81□□□□□ -1.64
CISHQ9NSE2 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.81□□□□□ -1.64
CISHQ9NSE2 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CISHQ9NSE2 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CISHQ9NSE2 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CISHQ9NSE2 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CISHQ9NSE2 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CISHQ9NSE2 RNA5SP332-201ENST00000391063 115 ntBASIC4.81□□□□□ -1.64
CISHQ9NSE2 RPS3AP23-201ENST00000401762 784 ntBASIC4.81□□□□□ -1.64
CISHQ9NSE2 RPL7AP25-201ENST00000423357 805 ntBASIC4.81□□□□□ -1.64
CISHQ9NSE2 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.81□□□□□ -1.64
CISHQ9NSE2 RPL23AP1-201ENST00000428990 471 ntBASIC4.81□□□□□ -1.64
CISHQ9NSE2 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.81□□□□□ -1.64
CISHQ9NSE2 AC012671.1-201ENST00000451912 203 ntBASIC4.81□□□□□ -1.64
CISHQ9NSE2 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.81□□□□□ -1.64
CISHQ9NSE2 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.81□□□□□ -1.64
CISHQ9NSE2 ATP5G1P3-201ENST00000463301 410 ntBASIC4.81□□□□□ -1.64
CISHQ9NSE2 SUMO2P4-201ENST00000504193 276 ntBASIC4.81□□□□□ -1.64
CISHQ9NSE2 AC093720.1-201ENST00000505681 714 ntBASIC4.81□□□□□ -1.64
CISHQ9NSE2 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.81□□□□□ -1.64
CISHQ9NSE2 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.81□□□□□ -1.64
CISHQ9NSE2 RN7SKP92-201ENST00000517266 244 ntBASIC4.81□□□□□ -1.64
CISHQ9NSE2 CDH12P4-201ENST00000517835 295 ntBASIC4.81□□□□□ -1.64
CISHQ9NSE2 CDH12P3-201ENST00000517935 295 ntBASIC4.81□□□□□ -1.64
CISHQ9NSE2 CDH12P1-201ENST00000518435 295 ntBASIC4.81□□□□□ -1.64
CISHQ9NSE2 AP000827.1-201ENST00000527814 258 ntBASIC4.81□□□□□ -1.64
CISHQ9NSE2 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.81□□□□□ -1.64
CISHQ9NSE2 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.81□□□□□ -1.64
CISHQ9NSE2 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.81□□□□□ -1.64
CISHQ9NSE2 SNORD91B-202ENST00000608459 222 ntBASIC4.81□□□□□ -1.64
CISHQ9NSE2 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.81□□□□□ -1.64
CISHQ9NSE2 AC020634.1-201ENST00000608701 549 ntBASIC4.81□□□□□ -1.64
CISHQ9NSE2 AC091905.2-201ENST00000623143 306 ntBASIC4.81□□□□□ -1.64
CISHQ9NSE2 NXPH1-205ENST00000602349 1953 ntBASIC4.81□□□□□ -1.64
CISHQ9NSE2 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CISHQ9NSE2 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.8□□□□□ -1.64
CISHQ9NSE2 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.8□□□□□ -1.64
CISHQ9NSE2 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CISHQ9NSE2 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CISHQ9NSE2 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CISHQ9NSE2 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CISHQ9NSE2 AC139713.2-215ENST00000641428 5037 ntBASIC4.8□□□□□ -1.64
CISHQ9NSE2 RNU1-63P-201ENST00000383902 164 ntBASIC4.8□□□□□ -1.64
CISHQ9NSE2 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CISHQ9NSE2 SNORA11B-201ENST00000408175 129 ntBASIC4.8□□□□□ -1.64
CISHQ9NSE2 RPL37P18-201ENST00000411602 243 ntBASIC4.8□□□□□ -1.64
CISHQ9NSE2 RPL26P29-201ENST00000415623 438 ntBASIC4.8□□□□□ -1.64
CISHQ9NSE2 XIST-201ENST00000416330 750 ntTSL 2 BASIC4.8□□□□□ -1.64
CISHQ9NSE2 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC4.8□□□□□ -1.64
CISHQ9NSE2 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC4.8□□□□□ -1.64
CISHQ9NSE2 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CISHQ9NSE2 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CISHQ9NSE2 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.8□□□□□ -1.64
CISHQ9NSE2 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CISHQ9NSE2 CYCSP28-201ENST00000534284 321 ntBASIC4.8□□□□□ -1.64
CISHQ9NSE2 AP005119.2-201ENST00000579735 1105 ntBASIC4.8□□□□□ -1.64
CISHQ9NSE2 AC234771.5-201ENST00000600161 514 ntBASIC4.8□□□□□ -1.64
CISHQ9NSE2 RPL7P50-201ENST00000600588 727 ntBASIC4.8□□□□□ -1.64
CISHQ9NSE2 AC093765.1-201ENST00000603758 881 ntBASIC4.8□□□□□ -1.64
CISHQ9NSE2 AC115286.1-201ENST00000604298 434 ntBASIC4.8□□□□□ -1.64
CISHQ9NSE2 AP002360.3-201ENST00000607673 710 ntBASIC4.8□□□□□ -1.64
CISHQ9NSE2 uc_338.18-201ENST00000615451 175 ntBASIC4.8□□□□□ -1.64
CISHQ9NSE2 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.8□□□□□ -1.64
CISHQ9NSE2 CASC19-204ENST00000641001 2055 ntBASIC4.8□□□□□ -1.64
CISHQ9NSE2 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.8□□□□□ -1.64
CISHQ9NSE2 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CISHQ9NSE2 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CISHQ9NSE2 RAD17P1-201ENST00000418130 2042 ntBASIC4.8□□□□□ -1.64
CISHQ9NSE2 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CISHQ9NSE2 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CISHQ9NSE2 AC020633.1-201ENST00000468439 2247 ntBASIC4.8□□□□□ -1.64
CISHQ9NSE2 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.8□□□□□ -1.64
CISHQ9NSE2 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CISHQ9NSE2 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.8□□□□□ -1.64
CISHQ9NSE2 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
CISHQ9NSE2 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.79□□□□□ -1.64
CISHQ9NSE2 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.79□□□□□ -1.64
CISHQ9NSE2 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
CISHQ9NSE2 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.79□□□□□ -1.64
CISHQ9NSE2 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.79□□□□□ -1.64
CISHQ9NSE2 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
CISHQ9NSE2 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
CISHQ9NSE2 OR56B2P-202ENST00000641377 2453 ntBASIC4.79□□□□□ -1.64
CISHQ9NSE2 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.79□□□□□ -1.64
CISHQ9NSE2 MIR129-1-201ENST00000384972 72 ntBASIC4.79□□□□□ -1.64
CISHQ9NSE2 VDAC1P9-201ENST00000412766 841 ntBASIC4.79□□□□□ -1.64
CISHQ9NSE2 NPM1P26-201ENST00000426339 738 ntBASIC4.79□□□□□ -1.64
CISHQ9NSE2 NDUFA5P1-201ENST00000433858 341 ntBASIC4.79□□□□□ -1.64
CISHQ9NSE2 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.79□□□□□ -1.64
CISHQ9NSE2 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.79□□□□□ -1.64
CISHQ9NSE2 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
CISHQ9NSE2 RN7SL205P-201ENST00000490174 284 ntBASIC4.79□□□□□ -1.64
CISHQ9NSE2 RPS23P1-201ENST00000491662 432 ntBASIC4.79□□□□□ -1.64
CISHQ9NSE2 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.79□□□□□ -1.64
CISHQ9NSE2 RNU6-513P-201ENST00000516104 104 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms