Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 C4BPB-201ENST00000243611 1117 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
RTN4Q9NQC3 ATP5I-201ENST00000304312 365 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
RTN4Q9NQC3 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
RTN4Q9NQC3 RN7SKP48-201ENST00000365031 328 ntBASIC9.11□□□□□ -0.95
RTN4Q9NQC3 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
RTN4Q9NQC3 AP002761.1-201ENST00000400985 262 ntTSL 3 BASIC9.11□□□□□ -0.95
RTN4Q9NQC3 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC9.11□□□□□ -0.95
RTN4Q9NQC3 AC244034.1-201ENST00000428027 792 ntBASIC9.11□□□□□ -0.95
RTN4Q9NQC3 RPS23P8-201ENST00000429775 330 ntBASIC9.11□□□□□ -0.95
RTN4Q9NQC3 MTND6P18-201ENST00000439477 513 ntBASIC9.11□□□□□ -0.95
RTN4Q9NQC3 FUNDC2P4-201ENST00000441207 421 ntBASIC9.11□□□□□ -0.95
RTN4Q9NQC3 RPS17P13-201ENST00000448974 407 ntBASIC9.11□□□□□ -0.95
RTN4Q9NQC3 PHYKPL-205ENST00000476170 824 ntTSL 4 BASIC9.11□□□□□ -0.95
RTN4Q9NQC3 FAM107B-228ENST00000496330 697 ntAPPRIS P1 TSL 4 BASIC9.11□□□□□ -0.95
RTN4Q9NQC3 AC091885.1-201ENST00000506658 268 ntBASIC9.11□□□□□ -0.95
RTN4Q9NQC3 AC100849.1-203ENST00000518417 723 ntTSL 4 BASIC9.11□□□□□ -0.95
RTN4Q9NQC3 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC9.11□□□□□ -0.95
RTN4Q9NQC3 AP002469.1-201ENST00000526011 1043 ntBASIC9.11□□□□□ -0.95
RTN4Q9NQC3 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC9.11□□□□□ -0.95
RTN4Q9NQC3 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC9.11□□□□□ -0.95
RTN4Q9NQC3 PTP4A1P6-201ENST00000531034 478 ntBASIC9.11□□□□□ -0.95
RTN4Q9NQC3 AP003385.6-201ENST00000531603 374 ntBASIC9.11□□□□□ -0.95
RTN4Q9NQC3 AC087241.2-201ENST00000535801 324 ntBASIC9.11□□□□□ -0.95
RTN4Q9NQC3 MGST1-215ENST00000540056 546 ntTSL 3 BASIC9.11□□□□□ -0.95
RTN4Q9NQC3 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC9.11□□□□□ -0.95
RTN4Q9NQC3 SPATA8-202ENST00000558553 406 ntAPPRIS ALT2 TSL 2 BASIC9.11□□□□□ -0.95
RTN4Q9NQC3 VWA3A-205ENST00000563755 861 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
RTN4Q9NQC3 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC9.11□□□□□ -0.95
RTN4Q9NQC3 AC007221.1-201ENST00000570038 796 ntTSL 5 BASIC9.11□□□□□ -0.95
RTN4Q9NQC3 RPL10P15-201ENST00000585756 315 ntBASIC9.11□□□□□ -0.95
RTN4Q9NQC3 AC007687.1-201ENST00000602704 304 ntBASIC9.11□□□□□ -0.95
RTN4Q9NQC3 AC103710.2-201ENST00000609912 942 ntBASIC9.11□□□□□ -0.95
RTN4Q9NQC3 VPS8-228ENST00000628962 207 ntTSL 5 BASIC9.11□□□□□ -0.95
RTN4Q9NQC3 FAM238A-202ENST00000637359 442 ntBASIC9.11□□□□□ -0.95
RTN4Q9NQC3 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
RTN4Q9NQC3 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
RTN4Q9NQC3 AL157700.1-201ENST00000561973 1432 ntBASIC9.11□□□□□ -0.95
RTN4Q9NQC3 EPB41L5-202ENST00000331393 1777 ntAPPRIS P1 TSL 2 BASIC9.11□□□□□ -0.95
RTN4Q9NQC3 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
RTN4Q9NQC3 AC104083.1-201ENST00000569449 2615 ntBASIC9.11□□□□□ -0.95
RTN4Q9NQC3 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
RTN4Q9NQC3 IL15-207ENST00000514653 1388 ntTSL 5 BASIC9.11□□□□□ -0.95
RTN4Q9NQC3 AC015849.5-201ENST00000604907 5473 ntTSL 2 BASIC9.11□□□□□ -0.95
RTN4Q9NQC3 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
RTN4Q9NQC3 MTFR2-205ENST00000451457 1524 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
RTN4Q9NQC3 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
RTN4Q9NQC3 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
RTN4Q9NQC3 FMO5-203ENST00000441068 1696 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
RTN4Q9NQC3 LINC02203-204ENST00000628444 2323 ntTSL 2 BASIC9.1□□□□□ -0.95
RTN4Q9NQC3 NEXN-202ENST00000334785 2607 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
RTN4Q9NQC3 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC9.1□□□□□ -0.95
RTN4Q9NQC3 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
RTN4Q9NQC3 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC9.1□□□□□ -0.95
RTN4Q9NQC3 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
RTN4Q9NQC3 AC002525.1-201ENST00000624392 1622 ntBASIC9.1□□□□□ -0.95
RTN4Q9NQC3 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC9.1□□□□□ -0.95
RTN4Q9NQC3 AC073343.1-201ENST00000328239 651 ntBASIC9.1□□□□□ -0.95
RTN4Q9NQC3 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
RTN4Q9NQC3 RNU6-821P-201ENST00000390995 107 ntBASIC9.1□□□□□ -0.95
RTN4Q9NQC3 AL356057.2-201ENST00000403318 432 ntBASIC9.1□□□□□ -0.95
RTN4Q9NQC3 AL034372.1-201ENST00000407586 754 ntBASIC9.1□□□□□ -0.95
RTN4Q9NQC3 RNU6-516P-201ENST00000411381 104 ntBASIC9.1□□□□□ -0.95
RTN4Q9NQC3 MAGEB6P1-201ENST00000416929 1224 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
RTN4Q9NQC3 AKR1B1P1-201ENST00000429105 956 ntBASIC9.1□□□□□ -0.95
RTN4Q9NQC3 ANKRD54P1-201ENST00000433115 471 ntBASIC9.1□□□□□ -0.95
RTN4Q9NQC3 ELOCP18-201ENST00000434209 337 ntBASIC9.1□□□□□ -0.95
RTN4Q9NQC3 RPL5P25-201ENST00000441148 775 ntBASIC9.1□□□□□ -0.95
RTN4Q9NQC3 AC002366.1-201ENST00000446186 1190 ntBASIC9.1□□□□□ -0.95
RTN4Q9NQC3 MYL6P1-201ENST00000449877 453 ntBASIC9.1□□□□□ -0.95
RTN4Q9NQC3 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC9.1□□□□□ -0.95
RTN4Q9NQC3 HIGD1AP16-201ENST00000450986 258 ntBASIC9.1□□□□□ -0.95
RTN4Q9NQC3 CBX1P2-201ENST00000453841 458 ntBASIC9.1□□□□□ -0.95
RTN4Q9NQC3 AC016700.3-201ENST00000455541 448 ntTSL 3 BASIC9.1□□□□□ -0.95
RTN4Q9NQC3 AL391825.1-202ENST00000458136 741 ntBASIC9.1□□□□□ -0.95
RTN4Q9NQC3 EIF4EP3-201ENST00000498782 656 ntBASIC9.1□□□□□ -0.95
RTN4Q9NQC3 HMGN1P13-201ENST00000505795 138 ntBASIC9.1□□□□□ -0.95
RTN4Q9NQC3 RNU4ATAC8P-201ENST00000516196 109 ntBASIC9.1□□□□□ -0.95
RTN4Q9NQC3 RNU6-798P-201ENST00000516912 103 ntBASIC9.1□□□□□ -0.95
RTN4Q9NQC3 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC9.1□□□□□ -0.95
RTN4Q9NQC3 IGHVII-15-1-201ENST00000517931 220 ntBASIC9.1□□□□□ -0.95
RTN4Q9NQC3 CASC11-203ENST00000519071 791 ntTSL 3 BASIC9.1□□□□□ -0.95
RTN4Q9NQC3 C8orf87-201ENST00000521906 588 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
RTN4Q9NQC3 CACNA1C-AS3-201ENST00000543559 444 ntTSL 5 BASIC9.1□□□□□ -0.95
RTN4Q9NQC3 AC117498.2-202ENST00000549864 473 ntTSL 2 BASIC9.1□□□□□ -0.95
RTN4Q9NQC3 OR5BK1P-201ENST00000550421 823 ntBASIC9.1□□□□□ -0.95
RTN4Q9NQC3 AURKC-206ENST00000598785 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
RTN4Q9NQC3 AC243960.4-201ENST00000600532 288 ntBASIC9.1□□□□□ -0.95
RTN4Q9NQC3 AL137002.1-201ENST00000600642 182 ntBASIC9.1□□□□□ -0.95
RTN4Q9NQC3 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC9.1□□□□□ -0.95
RTN4Q9NQC3 uc_338.23-201ENST00000614169 164 ntBASIC9.1□□□□□ -0.95
RTN4Q9NQC3 AC024559.2-202ENST00000615240 529 ntTSL 5 BASIC9.1□□□□□ -0.95
RTN4Q9NQC3 OXSM-209ENST00000626005 309 ntTSL 3 BASIC9.1□□□□□ -0.95
RTN4Q9NQC3 AC099654.15-201ENST00000639802 509 ntBASIC9.1□□□□□ -0.95
RTN4Q9NQC3 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
RTN4Q9NQC3 NGDN-201ENST00000397154 2204 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
RTN4Q9NQC3 DHX40P1-201ENST00000588725 1412 ntBASIC9.1□□□□□ -0.95
RTN4Q9NQC3 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
RTN4Q9NQC3 PTBP3-205ENST00000374257 7240 ntAPPRIS ALT1 TSL 2 BASIC9.1□□□□□ -0.95
RTN4Q9NQC3 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
RTN4Q9NQC3 LARS-212ENST00000510191 3737 ntTSL 2 BASIC9.1□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms