Protein–RNA interactions for Protein: Q9HCM9

TRIM39, E3 ubiquitin-protein ligase TRIM39, humanhuman

Predictions only

Length 518 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39Q9HCM9 ATP6V1E1P1-201ENST00000439215 681 ntBASIC6□□□□□ -1.45
TRIM39Q9HCM9 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6□□□□□ -1.45
TRIM39Q9HCM9 RPL5P10-201ENST00000445207 894 ntBASIC6□□□□□ -1.45
TRIM39Q9HCM9 AL360221.1-201ENST00000445989 335 ntBASIC6□□□□□ -1.45
TRIM39Q9HCM9 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC6□□□□□ -1.45
TRIM39Q9HCM9 AC005077.1-201ENST00000449226 375 ntBASIC6□□□□□ -1.45
TRIM39Q9HCM9 AC016027.4-201ENST00000450866 277 ntBASIC6□□□□□ -1.45
TRIM39Q9HCM9 CFL1P4-201ENST00000451536 498 ntBASIC6□□□□□ -1.45
TRIM39Q9HCM9 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
TRIM39Q9HCM9 ANK3-207ENST00000460468 677 ntTSL 3 BASIC6□□□□□ -1.45
TRIM39Q9HCM9 RPL7P6-201ENST00000480903 738 ntBASIC6□□□□□ -1.45
TRIM39Q9HCM9 ACTG1P13-201ENST00000486987 1043 ntBASIC6□□□□□ -1.45
TRIM39Q9HCM9 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC6□□□□□ -1.45
TRIM39Q9HCM9 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC6□□□□□ -1.45
TRIM39Q9HCM9 MTATP6P22-201ENST00000507369 598 ntBASIC6□□□□□ -1.45
TRIM39Q9HCM9 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC6□□□□□ -1.45
TRIM39Q9HCM9 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC6□□□□□ -1.45
TRIM39Q9HCM9 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC6□□□□□ -1.45
TRIM39Q9HCM9 IGHVII-60-1-201ENST00000519079 256 ntBASIC6□□□□□ -1.45
TRIM39Q9HCM9 MTCYBP20-201ENST00000524239 1129 ntBASIC6□□□□□ -1.45
TRIM39Q9HCM9 AP003396.4-201ENST00000527574 265 ntBASIC6□□□□□ -1.45
TRIM39Q9HCM9 AL358913.1-201ENST00000554342 121 ntBASIC6□□□□□ -1.45
TRIM39Q9HCM9 LINC00556-201ENST00000569603 412 ntBASIC6□□□□□ -1.45
TRIM39Q9HCM9 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC6□□□□□ -1.45
TRIM39Q9HCM9 MIR4675-201ENST00000577898 77 ntBASIC6□□□□□ -1.45
TRIM39Q9HCM9 AP005119.1-201ENST00000580956 292 ntBASIC6□□□□□ -1.45
TRIM39Q9HCM9 AC103881.1-201ENST00000603476 538 ntBASIC6□□□□□ -1.45
TRIM39Q9HCM9 AP000811.1-201ENST00000603803 651 ntBASIC6□□□□□ -1.45
TRIM39Q9HCM9 AL390816.3-201ENST00000604527 1066 ntBASIC6□□□□□ -1.45
TRIM39Q9HCM9 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC6□□□□□ -1.45
TRIM39Q9HCM9 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC6□□□□□ -1.45
TRIM39Q9HCM9 AC024884.1-201ENST00000620583 399 ntBASIC6□□□□□ -1.45
TRIM39Q9HCM9 AL357562.1-201ENST00000624911 609 ntBASIC6□□□□□ -1.45
TRIM39Q9HCM9 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC6□□□□□ -1.45
TRIM39Q9HCM9 AC127502.3-201ENST00000636170 1206 ntBASIC6□□□□□ -1.45
TRIM39Q9HCM9 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC6□□□□□ -1.45
TRIM39Q9HCM9 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC6□□□□□ -1.45
TRIM39Q9HCM9 AC087516.1-201ENST00000561236 2428 ntBASIC6□□□□□ -1.45
TRIM39Q9HCM9 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC6□□□□□ -1.45
TRIM39Q9HCM9 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6□□□□□ -1.45
TRIM39Q9HCM9 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC6□□□□□ -1.45
TRIM39Q9HCM9 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC6□□□□□ -1.45
TRIM39Q9HCM9 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC6□□□□□ -1.45
TRIM39Q9HCM9 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6□□□□□ -1.45
TRIM39Q9HCM9 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
TRIM39Q9HCM9 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC6□□□□□ -1.45
TRIM39Q9HCM9 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC6□□□□□ -1.45
TRIM39Q9HCM9 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
TRIM39Q9HCM9 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
TRIM39Q9HCM9 QRSL1P1-201ENST00000400977 1540 ntBASIC5.99□□□□□ -1.45
TRIM39Q9HCM9 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC5.99□□□□□ -1.45
TRIM39Q9HCM9 AC026523.2-201ENST00000625039 7739 ntBASIC5.99□□□□□ -1.45
TRIM39Q9HCM9 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.99□□□□□ -1.45
TRIM39Q9HCM9 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
TRIM39Q9HCM9 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.99□□□□□ -1.45
TRIM39Q9HCM9 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
TRIM39Q9HCM9 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
TRIM39Q9HCM9 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.99□□□□□ -1.45
TRIM39Q9HCM9 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
TRIM39Q9HCM9 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.99□□□□□ -1.45
TRIM39Q9HCM9 MTND4P5-201ENST00000435821 1374 ntBASIC5.99□□□□□ -1.45
TRIM39Q9HCM9 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
TRIM39Q9HCM9 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
TRIM39Q9HCM9 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.99□□□□□ -1.45
TRIM39Q9HCM9 AC048351.1-201ENST00000420064 602 ntBASIC5.99□□□□□ -1.45
TRIM39Q9HCM9 RPL31P54-201ENST00000429803 370 ntBASIC5.99□□□□□ -1.45
TRIM39Q9HCM9 AC244035.1-201ENST00000430042 390 ntBASIC5.99□□□□□ -1.45
TRIM39Q9HCM9 USP9YP28-201ENST00000435142 589 ntBASIC5.99□□□□□ -1.45
TRIM39Q9HCM9 MTCYBP39-201ENST00000437562 491 ntBASIC5.99□□□□□ -1.45
TRIM39Q9HCM9 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC5.99□□□□□ -1.45
TRIM39Q9HCM9 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC5.99□□□□□ -1.45
TRIM39Q9HCM9 DNAJB5P1-201ENST00000454004 806 ntBASIC5.99□□□□□ -1.45
TRIM39Q9HCM9 MTCO3P16-201ENST00000454456 754 ntBASIC5.99□□□□□ -1.45
TRIM39Q9HCM9 HMGB1P4-201ENST00000455362 567 ntBASIC5.99□□□□□ -1.45
TRIM39Q9HCM9 RPL7AP52-201ENST00000458096 790 ntBASIC5.99□□□□□ -1.45
TRIM39Q9HCM9 AC015724.1-201ENST00000478577 156 ntBASIC5.99□□□□□ -1.45
TRIM39Q9HCM9 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC5.99□□□□□ -1.45
TRIM39Q9HCM9 AC069304.1-201ENST00000491593 704 ntBASIC5.99□□□□□ -1.45
TRIM39Q9HCM9 AC083795.1-201ENST00000491760 320 ntBASIC5.99□□□□□ -1.45
TRIM39Q9HCM9 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC5.99□□□□□ -1.45
TRIM39Q9HCM9 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
TRIM39Q9HCM9 AC147055.4-201ENST00000504399 745 ntBASIC5.99□□□□□ -1.45
TRIM39Q9HCM9 MTND3P5-201ENST00000512798 333 ntBASIC5.99□□□□□ -1.45
TRIM39Q9HCM9 RN7SKP238-201ENST00000516483 249 ntBASIC5.99□□□□□ -1.45
TRIM39Q9HCM9 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC5.99□□□□□ -1.45
TRIM39Q9HCM9 TPM3P3-201ENST00000521343 354 ntBASIC5.99□□□□□ -1.45
TRIM39Q9HCM9 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC5.99□□□□□ -1.45
TRIM39Q9HCM9 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.99□□□□□ -1.45
TRIM39Q9HCM9 EIF4A2P5-201ENST00000529914 499 ntBASIC5.99□□□□□ -1.45
TRIM39Q9HCM9 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC5.99□□□□□ -1.45
TRIM39Q9HCM9 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC5.99□□□□□ -1.45
TRIM39Q9HCM9 AC079905.1-201ENST00000549280 475 ntBASIC5.99□□□□□ -1.45
TRIM39Q9HCM9 AC007956.1-201ENST00000555623 542 ntBASIC5.99□□□□□ -1.45
TRIM39Q9HCM9 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC5.99□□□□□ -1.45
TRIM39Q9HCM9 AC090651.1-201ENST00000567865 634 ntBASIC5.99□□□□□ -1.45
TRIM39Q9HCM9 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.99□□□□□ -1.45
TRIM39Q9HCM9 AC090236.2-201ENST00000587933 1101 ntBASIC5.99□□□□□ -1.45
TRIM39Q9HCM9 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC5.99□□□□□ -1.45
TRIM39Q9HCM9 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC5.99□□□□□ -1.45
TRIM39Q9HCM9 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms