Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.35□□□□□ -1.71
CHD8Q9HCK8 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CHD8Q9HCK8 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC4.35□□□□□ -1.71
CHD8Q9HCK8 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CHD8Q9HCK8 ARL4AP5-201ENST00000404372 599 ntBASIC4.35□□□□□ -1.71
CHD8Q9HCK8 RNA5SP345-201ENST00000410646 108 ntBASIC4.35□□□□□ -1.71
CHD8Q9HCK8 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.35□□□□□ -1.71
CHD8Q9HCK8 RPL7P2-201ENST00000427639 268 ntBASIC4.35□□□□□ -1.71
CHD8Q9HCK8 NFYAP1-201ENST00000431953 972 ntBASIC4.35□□□□□ -1.71
CHD8Q9HCK8 PTP4A1P3-201ENST00000433661 420 ntBASIC4.35□□□□□ -1.71
CHD8Q9HCK8 CYCSP43-201ENST00000438233 310 ntBASIC4.35□□□□□ -1.71
CHD8Q9HCK8 AL133244.1-201ENST00000456007 258 ntBASIC4.35□□□□□ -1.71
CHD8Q9HCK8 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.35□□□□□ -1.71
CHD8Q9HCK8 AC069304.1-201ENST00000491593 704 ntBASIC4.35□□□□□ -1.71
CHD8Q9HCK8 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.35□□□□□ -1.71
CHD8Q9HCK8 RNU1-6P-201ENST00000516290 144 ntBASIC4.35□□□□□ -1.71
CHD8Q9HCK8 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.35□□□□□ -1.71
CHD8Q9HCK8 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CHD8Q9HCK8 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CHD8Q9HCK8 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CHD8Q9HCK8 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CHD8Q9HCK8 AC099669.2-201ENST00000616549 437 ntBASIC4.35□□□□□ -1.71
CHD8Q9HCK8 PCNP-208ENST00000627393 136 ntTSL 2 BASIC4.35□□□□□ -1.71
CHD8Q9HCK8 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.35□□□□□ -1.71
CHD8Q9HCK8 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.35□□□□□ -1.71
CHD8Q9HCK8 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CHD8Q9HCK8 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CHD8Q9HCK8 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.35□□□□□ -1.71
CHD8Q9HCK8 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CHD8Q9HCK8 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CHD8Q9HCK8 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CHD8Q9HCK8 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CHD8Q9HCK8 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC4.35□□□□□ -1.71
CHD8Q9HCK8 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.35□□□□□ -1.71
CHD8Q9HCK8 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
CHD8Q9HCK8 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.35□□□□□ -1.71
CHD8Q9HCK8 RPS17P17-201ENST00000419392 409 ntBASIC4.35□□□□□ -1.71
CHD8Q9HCK8 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.35□□□□□ -1.71
CHD8Q9HCK8 RPL7AP61-201ENST00000443410 636 ntBASIC4.35□□□□□ -1.71
CHD8Q9HCK8 AC104651.2-201ENST00000447549 528 ntBASIC4.35□□□□□ -1.71
CHD8Q9HCK8 AL049873.1-201ENST00000480540 376 ntBASIC4.35□□□□□ -1.71
CHD8Q9HCK8 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.35□□□□□ -1.71
CHD8Q9HCK8 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.35□□□□□ -1.71
CHD8Q9HCK8 RFPL4AP5-201ENST00000514977 504 ntBASIC4.35□□□□□ -1.71
CHD8Q9HCK8 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.35□□□□□ -1.71
CHD8Q9HCK8 AC010680.3-201ENST00000604215 520 ntBASIC4.35□□□□□ -1.71
CHD8Q9HCK8 AL352984.2-202ENST00000613699 155 ntBASIC4.35□□□□□ -1.71
CHD8Q9HCK8 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CHD8Q9HCK8 AL137141.1-201ENST00000624622 4836 ntBASIC4.35□□□□□ -1.71
CHD8Q9HCK8 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC4.35□□□□□ -1.71
CHD8Q9HCK8 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
CHD8Q9HCK8 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
CHD8Q9HCK8 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CHD8Q9HCK8 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC4.34□□□□□ -1.71
CHD8Q9HCK8 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
CHD8Q9HCK8 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC4.34□□□□□ -1.71
CHD8Q9HCK8 AC021146.4-201ENST00000309229 279 ntBASIC4.34□□□□□ -1.71
CHD8Q9HCK8 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
CHD8Q9HCK8 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC4.34□□□□□ -1.71
CHD8Q9HCK8 AC006326.1-201ENST00000445465 787 ntBASIC4.34□□□□□ -1.71
CHD8Q9HCK8 AL162151.2-201ENST00000448875 158 ntBASIC4.34□□□□□ -1.71
CHD8Q9HCK8 RN7SL189P-201ENST00000468631 289 ntBASIC4.34□□□□□ -1.71
CHD8Q9HCK8 DUXAP2-201ENST00000519198 589 ntBASIC4.34□□□□□ -1.71
CHD8Q9HCK8 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.34□□□□□ -1.71
CHD8Q9HCK8 AL022401.1-201ENST00000619498 108 ntBASIC4.34□□□□□ -1.71
CHD8Q9HCK8 RLIMP1-201ENST00000339626 1680 ntBASIC4.34□□□□□ -1.71
CHD8Q9HCK8 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC4.34□□□□□ -1.71
CHD8Q9HCK8 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.34□□□□□ -1.71
CHD8Q9HCK8 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
CHD8Q9HCK8 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CHD8Q9HCK8 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
CHD8Q9HCK8 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.34□□□□□ -1.71
CHD8Q9HCK8 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
CHD8Q9HCK8 AL583835.1-201ENST00000399570 407 ntBASIC4.34□□□□□ -1.72
CHD8Q9HCK8 TMSB10P2-201ENST00000416049 131 ntBASIC4.34□□□□□ -1.72
CHD8Q9HCK8 FTH1P10-202ENST00000430907 550 ntBASIC4.34□□□□□ -1.72
CHD8Q9HCK8 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC4.34□□□□□ -1.72
CHD8Q9HCK8 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC4.34□□□□□ -1.72
CHD8Q9HCK8 PARP4P3-201ENST00000510265 317 ntBASIC4.34□□□□□ -1.72
CHD8Q9HCK8 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.34□□□□□ -1.72
CHD8Q9HCK8 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
CHD8Q9HCK8 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.34□□□□□ -1.72
CHD8Q9HCK8 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.34□□□□□ -1.72
CHD8Q9HCK8 AC005412.1-201ENST00000580812 1049 ntBASIC4.34□□□□□ -1.72
CHD8Q9HCK8 MIR8089-201ENST00000620165 82 ntBASIC4.34□□□□□ -1.72
CHD8Q9HCK8 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.34□□□□□ -1.72
CHD8Q9HCK8 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC4.34□□□□□ -1.72
CHD8Q9HCK8 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.34□□□□□ -1.72
CHD8Q9HCK8 AC092162.3-201ENST00000624511 1624 ntBASIC4.34□□□□□ -1.72
CHD8Q9HCK8 AL161756.1-201ENST00000555861 1751 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
CHD8Q9HCK8 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.34□□□□□ -1.72
CHD8Q9HCK8 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
CHD8Q9HCK8 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CHD8Q9HCK8 Y_RNA.238-201ENST00000364441 102 ntBASIC4.33□□□□□ -1.72
CHD8Q9HCK8 RNA5SP513-201ENST00000364648 118 ntBASIC4.33□□□□□ -1.72
CHD8Q9HCK8 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
CHD8Q9HCK8 SNORA48.2-201ENST00000390926 124 ntBASIC4.33□□□□□ -1.72
CHD8Q9HCK8 SDHCP2-201ENST00000398565 501 ntBASIC4.33□□□□□ -1.72
CHD8Q9HCK8 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.33□□□□□ -1.72
CHD8Q9HCK8 PPIAP13-201ENST00000434706 478 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 158.1 ms