Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 CX3CL1-202ENST00000563383 3313 ntTSL 5 BASIC5.21□□□□□ -1.58
KRTAP3-3Q9BYR6 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
KRTAP3-3Q9BYR6 LINC02044-201ENST00000490139 2502 ntTSL 2 BASIC5.21□□□□□ -1.58
KRTAP3-3Q9BYR6 NFIA-203ENST00000371185 1714 ntTSL 5 BASIC5.21□□□□□ -1.58
KRTAP3-3Q9BYR6 ADGRG1-216ENST00000562631 4042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.58
KRTAP3-3Q9BYR6 AL157714.2-203ENST00000438275 2400 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
KRTAP3-3Q9BYR6 PCDHGA2-201ENST00000394576 4605 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
KRTAP3-3Q9BYR6 ZFY-204ENST00000449237 3464 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
KRTAP3-3Q9BYR6 SNORD87-201ENST00000364849 89 ntBASIC5.21□□□□□ -1.58
KRTAP3-3Q9BYR6 FLAD1-204ENST00000368428 1111 ntTSL 3 BASIC5.21□□□□□ -1.58
KRTAP3-3Q9BYR6 Y_RNA.507-201ENST00000384500 99 ntBASIC5.21□□□□□ -1.58
KRTAP3-3Q9BYR6 Y_RNA.531-201ENST00000384589 121 ntBASIC5.21□□□□□ -1.58
KRTAP3-3Q9BYR6 GNLY-202ENST00000409696 858 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
KRTAP3-3Q9BYR6 CAPG-204ENST00000409724 1151 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
KRTAP3-3Q9BYR6 RNU6-603P-201ENST00000411403 107 ntBASIC5.21□□□□□ -1.58
KRTAP3-3Q9BYR6 AL445426.1-201ENST00000427290 547 ntTSL 3 BASIC5.21□□□□□ -1.58
KRTAP3-3Q9BYR6 FAU-202ENST00000434372 533 ntTSL 2 BASIC5.21□□□□□ -1.58
KRTAP3-3Q9BYR6 AP001271.1-201ENST00000445532 206 ntTSL 3 BASIC5.21□□□□□ -1.58
KRTAP3-3Q9BYR6 EEF1B2P6-201ENST00000445713 673 ntBASIC5.21□□□□□ -1.58
KRTAP3-3Q9BYR6 LMCD1-205ENST00000454244 1113 ntTSL 2 BASIC5.21□□□□□ -1.58
KRTAP3-3Q9BYR6 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.21□□□□□ -1.58
KRTAP3-3Q9BYR6 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC5.21□□□□□ -1.58
KRTAP3-3Q9BYR6 RN7SL806P-201ENST00000467399 282 ntBASIC5.21□□□□□ -1.58
KRTAP3-3Q9BYR6 RPL23AP14-201ENST00000468281 468 ntBASIC5.21□□□□□ -1.58
KRTAP3-3Q9BYR6 RN7SL709P-201ENST00000478855 300 ntBASIC5.21□□□□□ -1.58
KRTAP3-3Q9BYR6 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.21□□□□□ -1.58
KRTAP3-3Q9BYR6 AC083906.5-201ENST00000503722 328 ntBASIC5.21□□□□□ -1.58
KRTAP3-3Q9BYR6 IGKV2D-19-201ENST00000523346 262 ntBASIC5.21□□□□□ -1.58
KRTAP3-3Q9BYR6 LINC02320-201ENST00000557778 454 ntTSL 3 BASIC5.21□□□□□ -1.58
KRTAP3-3Q9BYR6 TRAPPC2L-212ENST00000567312 499 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
KRTAP3-3Q9BYR6 AC015908.3-202ENST00000579367 457 ntTSL 2 BASIC5.21□□□□□ -1.58
KRTAP3-3Q9BYR6 SUPT4H1-204ENST00000580947 574 ntAPPRIS P1 TSL 4 BASIC5.21□□□□□ -1.58
KRTAP3-3Q9BYR6 AC012313.7-201ENST00000598051 409 ntBASIC5.21□□□□□ -1.58
KRTAP3-3Q9BYR6 AC099849.1-201ENST00000603437 466 ntBASIC5.21□□□□□ -1.58
KRTAP3-3Q9BYR6 MED25-209ENST00000612791 881 ntTSL 5 BASIC5.21□□□□□ -1.58
KRTAP3-3Q9BYR6 MIR6165-201ENST00000614803 84 ntBASIC5.21□□□□□ -1.58
KRTAP3-3Q9BYR6 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC5.21□□□□□ -1.58
KRTAP3-3Q9BYR6 POLR2J3-221ENST00000621093 348 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
KRTAP3-3Q9BYR6 HTT-AS1_2.1-201ENST00000621529 175 ntBASIC5.21□□□□□ -1.58
KRTAP3-3Q9BYR6 AC002064.3-201ENST00000623448 346 ntBASIC5.21□□□□□ -1.58
KRTAP3-3Q9BYR6 PCBP1-AS1-291ENST00000626440 461 ntTSL 5 BASIC5.21□□□□□ -1.58
KRTAP3-3Q9BYR6 PKD1L2-205ENST00000527937 4165 ntTSL 2 BASIC5.21□□□□□ -1.58
KRTAP3-3Q9BYR6 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
KRTAP3-3Q9BYR6 APPL2-202ENST00000539978 2680 ntTSL 2 BASIC5.21□□□□□ -1.58
KRTAP3-3Q9BYR6 RPL28-201ENST00000344063 4796 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
KRTAP3-3Q9BYR6 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
KRTAP3-3Q9BYR6 MLLT3-209ENST00000629733 3264 ntTSL 5 BASIC5.21□□□□□ -1.58
KRTAP3-3Q9BYR6 SHROOM3-201ENST00000296043 11020 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
KRTAP3-3Q9BYR6 JDP2-204ENST00000437176 3775 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
KRTAP3-3Q9BYR6 PLEC-201ENST00000322810 15249 ntAPPRIS P4 TSL 1 (best) BASIC5.21□□□□□ -1.58
KRTAP3-3Q9BYR6 TPT1-212ENST00000530705 4735 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
KRTAP3-3Q9BYR6 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
KRTAP3-3Q9BYR6 DPY19L1-201ENST00000310974 4870 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
KRTAP3-3Q9BYR6 MAPK10-345ENST00000641724 2980 ntAPPRIS P2 BASIC5.21□□□□□ -1.58
KRTAP3-3Q9BYR6 HDAC2-AS2-208ENST00000519104 2016 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
KRTAP3-3Q9BYR6 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
KRTAP3-3Q9BYR6 TMEM237-203ENST00000409883 5415 ntAPPRIS P4 TSL 5 BASIC5.21□□□□□ -1.58
KRTAP3-3Q9BYR6 IL22RA1-201ENST00000270800 2798 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
KRTAP3-3Q9BYR6 SLC14A2-201ENST00000255226 4746 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
KRTAP3-3Q9BYR6 MYH9-201ENST00000216181 7501 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
KRTAP3-3Q9BYR6 YPEL2-201ENST00000312655 5217 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
KRTAP3-3Q9BYR6 AC138951.1-201ENST00000502532 2685 ntBASIC5.2□□□□□ -1.58
KRTAP3-3Q9BYR6 SHROOM2-202ENST00000418909 4615 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
KRTAP3-3Q9BYR6 DNAJC18-201ENST00000302060 5103 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
KRTAP3-3Q9BYR6 ADA2-202ENST00000330232 3195 ntTSL 2 BASIC5.2□□□□□ -1.58
KRTAP3-3Q9BYR6 SMARCA2-209ENST00000382203 5867 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
KRTAP3-3Q9BYR6 YPEL5-203ENST00000379520 2560 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
KRTAP3-3Q9BYR6 ITGA7-206ENST00000553804 3935 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
KRTAP3-3Q9BYR6 BIN2-202ENST00000544402 1990 ntTSL 2 BASIC5.2□□□□□ -1.58
KRTAP3-3Q9BYR6 OCLN-201ENST00000355237 6438 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
KRTAP3-3Q9BYR6 HECW2-202ENST00000409111 6692 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
KRTAP3-3Q9BYR6 FHL1-201ENST00000345434 2458 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
KRTAP3-3Q9BYR6 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
KRTAP3-3Q9BYR6 ALOXE3-203ENST00000448843 3203 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
KRTAP3-3Q9BYR6 CFAP44-201ENST00000295868 3377 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
KRTAP3-3Q9BYR6 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
KRTAP3-3Q9BYR6 IDS-201ENST00000340855 7619 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
KRTAP3-3Q9BYR6 LINC01120-201ENST00000437751 1861 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
KRTAP3-3Q9BYR6 DDX24-205ENST00000555054 2769 ntTSL 5 BASIC5.2□□□□□ -1.58
KRTAP3-3Q9BYR6 MAPK10-260ENST00000641047 2546 ntBASIC5.2□□□□□ -1.58
KRTAP3-3Q9BYR6 AL161636.1-201ENST00000427145 2254 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
KRTAP3-3Q9BYR6 ASTN1-204ENST00000424564 3685 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
KRTAP3-3Q9BYR6 COL4A5-201ENST00000328300 6483 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
KRTAP3-3Q9BYR6 COL4A5-202ENST00000361603 6469 ntAPPRIS P3 TSL 2 BASIC5.2□□□□□ -1.58
KRTAP3-3Q9BYR6 ABT1-201ENST00000274849 2949 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
KRTAP3-3Q9BYR6 TUBB-208ENST00000396389 2903 ntTSL 5 BASIC5.2□□□□□ -1.58
KRTAP3-3Q9BYR6 RIPPLY1-201ENST00000276173 1172 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
KRTAP3-3Q9BYR6 CD300A-203ENST00000361933 382 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
KRTAP3-3Q9BYR6 Y_RNA.66-201ENST00000362862 102 ntBASIC5.2□□□□□ -1.58
KRTAP3-3Q9BYR6 RNU6-529P-201ENST00000363383 104 ntBASIC5.2□□□□□ -1.58
KRTAP3-3Q9BYR6 CCR3-203ENST00000395942 1201 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
KRTAP3-3Q9BYR6 U3.36-201ENST00000408418 213 ntBASIC5.2□□□□□ -1.58
KRTAP3-3Q9BYR6 AL356583.3-201ENST00000412354 417 ntBASIC5.2□□□□□ -1.58
KRTAP3-3Q9BYR6 AL590640.1-201ENST00000425205 379 ntTSL 3 BASIC5.2□□□□□ -1.58
KRTAP3-3Q9BYR6 AC091390.3-201ENST00000426478 338 ntBASIC5.2□□□□□ -1.58
KRTAP3-3Q9BYR6 FTLP3-201ENST00000427242 528 ntBASIC5.2□□□□□ -1.58
KRTAP3-3Q9BYR6 AC087163.1-201ENST00000430089 381 ntBASIC5.2□□□□□ -1.58
KRTAP3-3Q9BYR6 AC245036.4-201ENST00000432400 319 ntBASIC5.2□□□□□ -1.58
KRTAP3-3Q9BYR6 PLA2G6-211ENST00000436218 552 ntTSL 4 BASIC5.2□□□□□ -1.58
KRTAP3-3Q9BYR6 FOLR2-203ENST00000449475 1242 ntTSL 3 BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 239.8 ms