Protein–RNA interactions for Protein: Q8NEV1

CSNK2A3, Casein kinase II subunit alpha 3, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A3Q8NEV1 RNU1-19P-201ENST00000363306 165 ntBASIC4.68□□□□□ -1.66
CSNK2A3Q8NEV1 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC4.68□□□□□ -1.66
CSNK2A3Q8NEV1 RNU6-98P-201ENST00000384173 107 ntBASIC4.68□□□□□ -1.66
CSNK2A3Q8NEV1 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
CSNK2A3Q8NEV1 RPL23AP59-201ENST00000399415 461 ntBASIC4.68□□□□□ -1.66
CSNK2A3Q8NEV1 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC4.68□□□□□ -1.66
CSNK2A3Q8NEV1 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC4.68□□□□□ -1.66
CSNK2A3Q8NEV1 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC4.68□□□□□ -1.66
CSNK2A3Q8NEV1 AC246680.2-201ENST00000422106 389 ntBASIC4.68□□□□□ -1.66
CSNK2A3Q8NEV1 IPPKP1-201ENST00000422501 768 ntBASIC4.68□□□□□ -1.66
CSNK2A3Q8NEV1 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.68□□□□□ -1.66
CSNK2A3Q8NEV1 OSTCP5-201ENST00000425293 453 ntBASIC4.68□□□□□ -1.66
CSNK2A3Q8NEV1 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC4.68□□□□□ -1.66
CSNK2A3Q8NEV1 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC4.68□□□□□ -1.66
CSNK2A3Q8NEV1 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC4.68□□□□□ -1.66
CSNK2A3Q8NEV1 SEPT14P24-201ENST00000447236 180 ntBASIC4.68□□□□□ -1.66
CSNK2A3Q8NEV1 AL031313.1-201ENST00000448435 256 ntBASIC4.68□□□□□ -1.66
CSNK2A3Q8NEV1 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC4.68□□□□□ -1.66
CSNK2A3Q8NEV1 OR51B8P-201ENST00000449892 769 ntBASIC4.68□□□□□ -1.66
CSNK2A3Q8NEV1 OR52E3P-201ENST00000452083 936 ntBASIC4.68□□□□□ -1.66
CSNK2A3Q8NEV1 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.68□□□□□ -1.66
CSNK2A3Q8NEV1 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.68□□□□□ -1.66
CSNK2A3Q8NEV1 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.68□□□□□ -1.66
CSNK2A3Q8NEV1 AC022133.1-201ENST00000490961 571 ntBASIC4.68□□□□□ -1.66
CSNK2A3Q8NEV1 AL049874.2-201ENST00000492636 288 ntBASIC4.68□□□□□ -1.66
CSNK2A3Q8NEV1 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC4.68□□□□□ -1.66
CSNK2A3Q8NEV1 HMGB1P44-201ENST00000508597 572 ntBASIC4.68□□□□□ -1.66
CSNK2A3Q8NEV1 AC093752.1-206ENST00000511823 336 ntBASIC4.68□□□□□ -1.66
CSNK2A3Q8NEV1 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC4.68□□□□□ -1.66
CSNK2A3Q8NEV1 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC4.68□□□□□ -1.66
CSNK2A3Q8NEV1 SCARNA20.4-201ENST00000516969 131 ntBASIC4.68□□□□□ -1.66
CSNK2A3Q8NEV1 CDC42P3-201ENST00000518493 633 ntBASIC4.68□□□□□ -1.66
CSNK2A3Q8NEV1 AC022360.1-201ENST00000521058 340 ntBASIC4.68□□□□□ -1.66
CSNK2A3Q8NEV1 AC112191.2-201ENST00000522428 333 ntBASIC4.68□□□□□ -1.66
CSNK2A3Q8NEV1 AC125612.1-201ENST00000547580 377 ntBASIC4.68□□□□□ -1.66
CSNK2A3Q8NEV1 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC4.68□□□□□ -1.66
CSNK2A3Q8NEV1 AC015720.2-201ENST00000567709 334 ntBASIC4.68□□□□□ -1.66
CSNK2A3Q8NEV1 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC4.68□□□□□ -1.66
CSNK2A3Q8NEV1 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC4.68□□□□□ -1.66
CSNK2A3Q8NEV1 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC4.68□□□□□ -1.66
CSNK2A3Q8NEV1 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.68□□□□□ -1.66
CSNK2A3Q8NEV1 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC4.68□□□□□ -1.66
CSNK2A3Q8NEV1 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
CSNK2A3Q8NEV1 HCG18-243ENST00000602498 327 ntTSL 3 BASIC4.68□□□□□ -1.66
CSNK2A3Q8NEV1 AL139407.1-201ENST00000613826 1175 ntBASIC4.68□□□□□ -1.66
CSNK2A3Q8NEV1 AL118522.2-201ENST00000616045 615 ntBASIC4.68□□□□□ -1.66
CSNK2A3Q8NEV1 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
CSNK2A3Q8NEV1 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.68□□□□□ -1.66
CSNK2A3Q8NEV1 AC138907.10-201ENST00000623708 983 ntBASIC4.68□□□□□ -1.66
CSNK2A3Q8NEV1 AC132068.1-201ENST00000623805 459 ntBASIC4.68□□□□□ -1.66
CSNK2A3Q8NEV1 AP003497.2-201ENST00000624220 967 ntBASIC4.68□□□□□ -1.66
CSNK2A3Q8NEV1 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC4.68□□□□□ -1.66
CSNK2A3Q8NEV1 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC4.68□□□□□ -1.66
CSNK2A3Q8NEV1 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.68□□□□□ -1.66
CSNK2A3Q8NEV1 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CSNK2A3Q8NEV1 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.68□□□□□ -1.66
CSNK2A3Q8NEV1 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CSNK2A3Q8NEV1 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CSNK2A3Q8NEV1 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CSNK2A3Q8NEV1 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CSNK2A3Q8NEV1 AC004817.4-201ENST00000602396 3625 ntBASIC4.67□□□□□ -1.66
CSNK2A3Q8NEV1 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CSNK2A3Q8NEV1 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
CSNK2A3Q8NEV1 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
CSNK2A3Q8NEV1 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
CSNK2A3Q8NEV1 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
CSNK2A3Q8NEV1 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC4.67□□□□□ -1.66
CSNK2A3Q8NEV1 AC005332.5-201ENST00000591222 2919 ntBASIC4.67□□□□□ -1.66
CSNK2A3Q8NEV1 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
CSNK2A3Q8NEV1 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC4.67□□□□□ -1.66
CSNK2A3Q8NEV1 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.67□□□□□ -1.66
CSNK2A3Q8NEV1 AC091305.2-201ENST00000624049 1576 ntBASIC4.67□□□□□ -1.66
CSNK2A3Q8NEV1 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC4.67□□□□□ -1.66
CSNK2A3Q8NEV1 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CSNK2A3Q8NEV1 OR9K1P-201ENST00000326513 941 ntBASIC4.67□□□□□ -1.66
CSNK2A3Q8NEV1 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CSNK2A3Q8NEV1 RNU4-44P-201ENST00000363050 141 ntBASIC4.67□□□□□ -1.66
CSNK2A3Q8NEV1 SNORA62.2-201ENST00000364672 152 ntBASIC4.67□□□□□ -1.66
CSNK2A3Q8NEV1 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC4.67□□□□□ -1.66
CSNK2A3Q8NEV1 BMS1P3-201ENST00000372011 932 ntBASIC4.67□□□□□ -1.66
CSNK2A3Q8NEV1 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.67□□□□□ -1.66
CSNK2A3Q8NEV1 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CSNK2A3Q8NEV1 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC4.67□□□□□ -1.66
CSNK2A3Q8NEV1 OR6E1P-201ENST00000414424 923 ntBASIC4.67□□□□□ -1.66
CSNK2A3Q8NEV1 AL449283.1-202ENST00000418249 604 ntBASIC4.67□□□□□ -1.66
CSNK2A3Q8NEV1 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC4.67□□□□□ -1.66
CSNK2A3Q8NEV1 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC4.67□□□□□ -1.66
CSNK2A3Q8NEV1 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CSNK2A3Q8NEV1 RPL7AP49-201ENST00000429522 581 ntBASIC4.67□□□□□ -1.66
CSNK2A3Q8NEV1 KCTD9P1-201ENST00000430462 1167 ntBASIC4.67□□□□□ -1.66
CSNK2A3Q8NEV1 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CSNK2A3Q8NEV1 AL591438.1-201ENST00000433508 581 ntBASIC4.67□□□□□ -1.66
CSNK2A3Q8NEV1 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC4.67□□□□□ -1.66
CSNK2A3Q8NEV1 RPL7P29-201ENST00000437151 728 ntBASIC4.67□□□□□ -1.66
CSNK2A3Q8NEV1 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC4.67□□□□□ -1.66
CSNK2A3Q8NEV1 AC064862.4-201ENST00000442180 334 ntBASIC4.67□□□□□ -1.66
CSNK2A3Q8NEV1 AL358794.1-201ENST00000445689 381 ntBASIC4.67□□□□□ -1.66
CSNK2A3Q8NEV1 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.67□□□□□ -1.66
CSNK2A3Q8NEV1 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
CSNK2A3Q8NEV1 RPL31P44-201ENST00000447680 377 ntBASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms