Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC5.73□□□□□ -1.49
RTL9Q8NET4 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RTL9Q8NET4 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RTL9Q8NET4 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC5.73□□□□□ -1.49
RTL9Q8NET4 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RTL9Q8NET4 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC5.73□□□□□ -1.49
RTL9Q8NET4 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
RTL9Q8NET4 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RTL9Q8NET4 AC009951.1-201ENST00000623674 2614 ntBASIC5.72□□□□□ -1.49
RTL9Q8NET4 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RTL9Q8NET4 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
RTL9Q8NET4 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RTL9Q8NET4 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC5.72□□□□□ -1.49
RTL9Q8NET4 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.72□□□□□ -1.49
RTL9Q8NET4 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.72□□□□□ -1.49
RTL9Q8NET4 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RTL9Q8NET4 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RTL9Q8NET4 SNORA57.1-201ENST00000391227 145 ntBASIC5.72□□□□□ -1.49
RTL9Q8NET4 OR6C69P-201ENST00000394268 893 ntBASIC5.72□□□□□ -1.49
RTL9Q8NET4 RPL23AP59-201ENST00000399415 461 ntBASIC5.72□□□□□ -1.49
RTL9Q8NET4 RPL31-204ENST00000409038 817 ntTSL 2 BASIC5.72□□□□□ -1.49
RTL9Q8NET4 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.72□□□□□ -1.49
RTL9Q8NET4 E2F6P2-201ENST00000420708 748 ntBASIC5.72□□□□□ -1.49
RTL9Q8NET4 EIF4HP2-201ENST00000424380 563 ntBASIC5.72□□□□□ -1.49
RTL9Q8NET4 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC5.72□□□□□ -1.49
RTL9Q8NET4 AC104651.2-201ENST00000447549 528 ntBASIC5.72□□□□□ -1.49
RTL9Q8NET4 RHEBP2-201ENST00000450289 600 ntBASIC5.72□□□□□ -1.49
RTL9Q8NET4 RPL23AP24-201ENST00000458203 385 ntBASIC5.72□□□□□ -1.49
RTL9Q8NET4 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC5.72□□□□□ -1.49
RTL9Q8NET4 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.72□□□□□ -1.49
RTL9Q8NET4 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
RTL9Q8NET4 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
RTL9Q8NET4 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
RTL9Q8NET4 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
RTL9Q8NET4 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.72□□□□□ -1.49
RTL9Q8NET4 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC5.72□□□□□ -1.49
RTL9Q8NET4 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.71□□□□□ -1.49
RTL9Q8NET4 OR51H2P-202ENST00000641424 3046 ntBASIC5.71□□□□□ -1.49
RTL9Q8NET4 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.49
RTL9Q8NET4 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
RTL9Q8NET4 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.71□□□□□ -1.5
RTL9Q8NET4 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RTL9Q8NET4 RNA5SP388-201ENST00000362584 119 ntBASIC5.71□□□□□ -1.5
RTL9Q8NET4 RNA5SP28-201ENST00000363841 119 ntBASIC5.71□□□□□ -1.5
RTL9Q8NET4 SNORA37-201ENST00000384504 129 ntBASIC5.71□□□□□ -1.5
RTL9Q8NET4 AL356387.2-201ENST00000422272 243 ntBASIC5.71□□□□□ -1.5
RTL9Q8NET4 RPL7AP25-201ENST00000423357 805 ntBASIC5.71□□□□□ -1.5
RTL9Q8NET4 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC5.71□□□□□ -1.5
RTL9Q8NET4 NPM1P28-201ENST00000492269 840 ntBASIC5.71□□□□□ -1.5
RTL9Q8NET4 NPM1P6-201ENST00000521088 871 ntBASIC5.71□□□□□ -1.5
RTL9Q8NET4 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.71□□□□□ -1.5
RTL9Q8NET4 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
RTL9Q8NET4 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RTL9Q8NET4 AC015914.2-201ENST00000618167 288 ntBASIC5.71□□□□□ -1.5
RTL9Q8NET4 AP000756.2-201ENST00000624168 2567 ntBASIC5.71□□□□□ -1.5
RTL9Q8NET4 SALL4P2-201ENST00000423288 2910 ntBASIC5.71□□□□□ -1.5
RTL9Q8NET4 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
RTL9Q8NET4 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.71□□□□□ -1.5
RTL9Q8NET4 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.71□□□□□ -1.5
RTL9Q8NET4 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.71□□□□□ -1.5
RTL9Q8NET4 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
RTL9Q8NET4 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
RTL9Q8NET4 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.7□□□□□ -1.5
RTL9Q8NET4 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
RTL9Q8NET4 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RTL9Q8NET4 RAD23BP1-201ENST00000421404 1227 ntBASIC5.7□□□□□ -1.5
RTL9Q8NET4 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.7□□□□□ -1.5
RTL9Q8NET4 FTH1P16-201ENST00000435241 552 ntBASIC5.7□□□□□ -1.5
RTL9Q8NET4 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.7□□□□□ -1.5
RTL9Q8NET4 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RTL9Q8NET4 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.7□□□□□ -1.5
RTL9Q8NET4 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC5.7□□□□□ -1.5
RTL9Q8NET4 AC090948.1-201ENST00000607464 549 ntBASIC5.7□□□□□ -1.5
RTL9Q8NET4 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC5.7□□□□□ -1.5
RTL9Q8NET4 AL035461.2-201ENST00000619201 524 ntBASIC5.7□□□□□ -1.5
RTL9Q8NET4 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC5.7□□□□□ -1.5
RTL9Q8NET4 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.7□□□□□ -1.5
RTL9Q8NET4 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.7□□□□□ -1.5
RTL9Q8NET4 AC133552.1-201ENST00000569988 4007 ntBASIC5.7□□□□□ -1.5
RTL9Q8NET4 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RTL9Q8NET4 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RTL9Q8NET4 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RTL9Q8NET4 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RTL9Q8NET4 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
RTL9Q8NET4 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
RTL9Q8NET4 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC5.69□□□□□ -1.5
RTL9Q8NET4 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RTL9Q8NET4 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.69□□□□□ -1.5
RTL9Q8NET4 OR4K17-201ENST00000315543 1032 ntBASIC5.69□□□□□ -1.5
RTL9Q8NET4 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC5.69□□□□□ -1.5
RTL9Q8NET4 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC5.69□□□□□ -1.5
RTL9Q8NET4 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC5.69□□□□□ -1.5
RTL9Q8NET4 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.69□□□□□ -1.5
RTL9Q8NET4 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC5.69□□□□□ -1.5
RTL9Q8NET4 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC5.69□□□□□ -1.5
RTL9Q8NET4 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC5.69□□□□□ -1.5
RTL9Q8NET4 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC5.69□□□□□ -1.5
RTL9Q8NET4 EIF4A2P4-201ENST00000458691 1196 ntBASIC5.69□□□□□ -1.5
RTL9Q8NET4 ALG13-211ENST00000473389 693 ntTSL 2 BASIC5.69□□□□□ -1.5
RTL9Q8NET4 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms