Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SYNE4Q8N205 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SYNE4Q8N205 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SYNE4Q8N205 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SYNE4Q8N205 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC6.3□□□□□ -1.4
SYNE4Q8N205 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SYNE4Q8N205 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SYNE4Q8N205 AL929601.4-201ENST00000613011 1341 ntBASIC6.3□□□□□ -1.4
SYNE4Q8N205 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SYNE4Q8N205 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SYNE4Q8N205 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
SYNE4Q8N205 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SYNE4Q8N205 RN7SKP153-201ENST00000365026 316 ntBASIC6.3□□□□□ -1.4
SYNE4Q8N205 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC6.3□□□□□ -1.4
SYNE4Q8N205 SNORA2.3-201ENST00000383920 135 ntBASIC6.3□□□□□ -1.4
SYNE4Q8N205 SNORA70.6-201ENST00000383934 134 ntBASIC6.3□□□□□ -1.4
SYNE4Q8N205 RNU6-40P-201ENST00000384254 107 ntBASIC6.3□□□□□ -1.4
SYNE4Q8N205 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
SYNE4Q8N205 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC6.3□□□□□ -1.4
SYNE4Q8N205 VN1R51P-201ENST00000411675 945 ntBASIC6.3□□□□□ -1.4
SYNE4Q8N205 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC6.3□□□□□ -1.4
SYNE4Q8N205 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC6.3□□□□□ -1.4
SYNE4Q8N205 AC012519.1-201ENST00000424588 610 ntBASIC6.3□□□□□ -1.4
SYNE4Q8N205 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC6.3□□□□□ -1.4
SYNE4Q8N205 TXNP2-201ENST00000443918 295 ntBASIC6.3□□□□□ -1.4
SYNE4Q8N205 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC6.3□□□□□ -1.4
SYNE4Q8N205 CYCSP42-201ENST00000450823 238 ntBASIC6.3□□□□□ -1.4
SYNE4Q8N205 RPL23AP56-201ENST00000460778 453 ntBASIC6.3□□□□□ -1.4
SYNE4Q8N205 AC006967.1-201ENST00000467608 589 ntBASIC6.3□□□□□ -1.4
SYNE4Q8N205 KRTAP5-14P-201ENST00000502328 121 ntBASIC6.3□□□□□ -1.4
SYNE4Q8N205 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC6.3□□□□□ -1.4
SYNE4Q8N205 SLC25A15P5-201ENST00000508033 253 ntBASIC6.3□□□□□ -1.4
SYNE4Q8N205 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC6.3□□□□□ -1.4
SYNE4Q8N205 IMPA1P1-201ENST00000510718 842 ntBASIC6.3□□□□□ -1.4
SYNE4Q8N205 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC6.3□□□□□ -1.4
SYNE4Q8N205 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC6.3□□□□□ -1.4
SYNE4Q8N205 AC022360.1-201ENST00000521058 340 ntBASIC6.3□□□□□ -1.4
SYNE4Q8N205 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SYNE4Q8N205 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC6.3□□□□□ -1.4
SYNE4Q8N205 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC6.3□□□□□ -1.4
SYNE4Q8N205 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC6.3□□□□□ -1.4
SYNE4Q8N205 AC010547.7-201ENST00000570323 333 ntBASIC6.3□□□□□ -1.4
SYNE4Q8N205 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC6.3□□□□□ -1.4
SYNE4Q8N205 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
SYNE4Q8N205 MIR4509-3-201ENST00000578671 94 ntBASIC6.3□□□□□ -1.4
SYNE4Q8N205 MIR4284-201ENST00000578924 81 ntBASIC6.3□□□□□ -1.4
SYNE4Q8N205 MIR4509-2-201ENST00000583920 94 ntBASIC6.3□□□□□ -1.4
SYNE4Q8N205 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC6.3□□□□□ -1.4
SYNE4Q8N205 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC6.3□□□□□ -1.4
SYNE4Q8N205 AC015726.1-201ENST00000602353 681 ntBASIC6.3□□□□□ -1.4
SYNE4Q8N205 AL391358.1-201ENST00000605342 190 ntBASIC6.3□□□□□ -1.4
SYNE4Q8N205 AC112503.1-201ENST00000608436 391 ntBASIC6.3□□□□□ -1.4
SYNE4Q8N205 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC6.3□□□□□ -1.4
SYNE4Q8N205 MIR4509-1-201ENST00000618224 94 ntBASIC6.3□□□□□ -1.4
SYNE4Q8N205 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC6.3□□□□□ -1.4
SYNE4Q8N205 AL512506.2-201ENST00000624472 458 ntBASIC6.3□□□□□ -1.4
SYNE4Q8N205 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC6.3□□□□□ -1.4
SYNE4Q8N205 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SYNE4Q8N205 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.3□□□□□ -1.4
SYNE4Q8N205 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
SYNE4Q8N205 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC6.3□□□□□ -1.4
SYNE4Q8N205 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.3□□□□□ -1.4
SYNE4Q8N205 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SYNE4Q8N205 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC6.3□□□□□ -1.4
SYNE4Q8N205 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
SYNE4Q8N205 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SYNE4Q8N205 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC6.3□□□□□ -1.4
SYNE4Q8N205 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.3□□□□□ -1.4
SYNE4Q8N205 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SYNE4Q8N205 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC6.3□□□□□ -1.4
SYNE4Q8N205 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC6.29□□□□□ -1.4
SYNE4Q8N205 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
SYNE4Q8N205 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
SYNE4Q8N205 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SYNE4Q8N205 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SYNE4Q8N205 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC6.29□□□□□ -1.4
SYNE4Q8N205 AC087565.3-202ENST00000642085 1603 ntBASIC6.29□□□□□ -1.4
SYNE4Q8N205 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SYNE4Q8N205 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SYNE4Q8N205 MAX-203ENST00000341653 330 ntTSL 2 BASIC6.29□□□□□ -1.4
SYNE4Q8N205 SNORA70.2-201ENST00000364506 135 ntBASIC6.29□□□□□ -1.4
SYNE4Q8N205 RNA5SP479-201ENST00000364858 117 ntBASIC6.29□□□□□ -1.4
SYNE4Q8N205 Y_RNA.318-201ENST00000365131 97 ntBASIC6.29□□□□□ -1.4
SYNE4Q8N205 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC6.29□□□□□ -1.4
SYNE4Q8N205 HMGB3P7-201ENST00000400214 611 ntBASIC6.29□□□□□ -1.4
SYNE4Q8N205 Z97832.1-201ENST00000402490 328 ntBASIC6.29□□□□□ -1.4
SYNE4Q8N205 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC6.29□□□□□ -1.4
SYNE4Q8N205 RNA5SP113-201ENST00000410486 84 ntBASIC6.29□□□□□ -1.4
SYNE4Q8N205 RN7SKP17-201ENST00000411242 351 ntBASIC6.29□□□□□ -1.4
SYNE4Q8N205 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC6.29□□□□□ -1.4
SYNE4Q8N205 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SYNE4Q8N205 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC6.29□□□□□ -1.4
SYNE4Q8N205 AC069213.2-201ENST00000420238 366 ntBASIC6.29□□□□□ -1.4
SYNE4Q8N205 TCEA1P2-201ENST00000420496 906 ntBASIC6.29□□□□□ -1.4
SYNE4Q8N205 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC6.29□□□□□ -1.4
SYNE4Q8N205 MTND4P32-201ENST00000437189 1237 ntBASIC6.29□□□□□ -1.4
SYNE4Q8N205 OR7E125P-201ENST00000443450 846 ntBASIC6.29□□□□□ -1.4
SYNE4Q8N205 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC6.29□□□□□ -1.4
SYNE4Q8N205 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC6.29□□□□□ -1.4
SYNE4Q8N205 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms