Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 HMGN1P20-201ENST00000411849 300 ntBASIC5.92□□□□□ -1.46
TRIM48Q8IWZ4 AC092745.2-202ENST00000411880 369 ntBASIC5.92□□□□□ -1.46
TRIM48Q8IWZ4 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.92□□□□□ -1.46
TRIM48Q8IWZ4 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC5.92□□□□□ -1.46
TRIM48Q8IWZ4 MRPS36P1-201ENST00000421291 307 ntBASIC5.92□□□□□ -1.46
TRIM48Q8IWZ4 MTND1P30-201ENST00000441241 901 ntBASIC5.92□□□□□ -1.46
TRIM48Q8IWZ4 COX6CP2-201ENST00000444980 225 ntBASIC5.92□□□□□ -1.46
TRIM48Q8IWZ4 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC5.92□□□□□ -1.46
TRIM48Q8IWZ4 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC5.92□□□□□ -1.46
TRIM48Q8IWZ4 CFTRP1-201ENST00000456646 183 ntBASIC5.92□□□□□ -1.46
TRIM48Q8IWZ4 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC5.92□□□□□ -1.46
TRIM48Q8IWZ4 AC114728.1-201ENST00000488289 483 ntBASIC5.92□□□□□ -1.46
TRIM48Q8IWZ4 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.92□□□□□ -1.46
TRIM48Q8IWZ4 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC5.92□□□□□ -1.46
TRIM48Q8IWZ4 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC5.92□□□□□ -1.46
TRIM48Q8IWZ4 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC5.92□□□□□ -1.46
TRIM48Q8IWZ4 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC5.92□□□□□ -1.46
TRIM48Q8IWZ4 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC5.92□□□□□ -1.46
TRIM48Q8IWZ4 WBP1LP3-201ENST00000523033 208 ntBASIC5.92□□□□□ -1.46
TRIM48Q8IWZ4 AC005832.3-201ENST00000537929 631 ntBASIC5.92□□□□□ -1.46
TRIM48Q8IWZ4 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC5.92□□□□□ -1.46
TRIM48Q8IWZ4 AC245505.1-201ENST00000556398 224 ntBASIC5.92□□□□□ -1.46
TRIM48Q8IWZ4 AC234778.2-201ENST00000566241 354 ntBASIC5.92□□□□□ -1.46
TRIM48Q8IWZ4 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.92□□□□□ -1.46
TRIM48Q8IWZ4 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC5.92□□□□□ -1.46
TRIM48Q8IWZ4 RNU4ATAC-201ENST00000580972 127 ntBASIC5.92□□□□□ -1.46
TRIM48Q8IWZ4 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.92□□□□□ -1.46
TRIM48Q8IWZ4 ABBA01006766.1-201ENST00000584728 294 ntBASIC5.92□□□□□ -1.46
TRIM48Q8IWZ4 AC020916.2-201ENST00000591242 360 ntBASIC5.92□□□□□ -1.46
TRIM48Q8IWZ4 AC069545.1-201ENST00000605671 358 ntBASIC5.92□□□□□ -1.46
TRIM48Q8IWZ4 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC5.92□□□□□ -1.46
TRIM48Q8IWZ4 DLEU2_1.1-201ENST00000612089 120 ntBASIC5.92□□□□□ -1.46
TRIM48Q8IWZ4 DLEU2_1.2-201ENST00000614667 120 ntBASIC5.92□□□□□ -1.46
TRIM48Q8IWZ4 U6atac.1-201ENST00000616025 117 ntBASIC5.92□□□□□ -1.46
TRIM48Q8IWZ4 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC5.92□□□□□ -1.46
TRIM48Q8IWZ4 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.92□□□□□ -1.46
TRIM48Q8IWZ4 SAMMSON-209ENST00000641222 1100 ntBASIC5.92□□□□□ -1.46
TRIM48Q8IWZ4 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
TRIM48Q8IWZ4 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
TRIM48Q8IWZ4 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.92□□□□□ -1.46
TRIM48Q8IWZ4 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
TRIM48Q8IWZ4 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
TRIM48Q8IWZ4 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
TRIM48Q8IWZ4 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.92□□□□□ -1.46
TRIM48Q8IWZ4 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
TRIM48Q8IWZ4 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC5.92□□□□□ -1.46
TRIM48Q8IWZ4 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.92□□□□□ -1.46
TRIM48Q8IWZ4 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
TRIM48Q8IWZ4 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
TRIM48Q8IWZ4 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
TRIM48Q8IWZ4 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.92□□□□□ -1.46
TRIM48Q8IWZ4 NSRP1P1-201ENST00000444067 1693 ntBASIC5.91□□□□□ -1.46
TRIM48Q8IWZ4 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
TRIM48Q8IWZ4 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
TRIM48Q8IWZ4 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC5.91□□□□□ -1.46
TRIM48Q8IWZ4 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
TRIM48Q8IWZ4 GTF2H2B-203ENST00000508065 1432 ntBASIC5.91□□□□□ -1.46
TRIM48Q8IWZ4 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.91□□□□□ -1.46
TRIM48Q8IWZ4 AC012020.1-201ENST00000624541 1728 ntBASIC5.91□□□□□ -1.46
TRIM48Q8IWZ4 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
TRIM48Q8IWZ4 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
TRIM48Q8IWZ4 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
TRIM48Q8IWZ4 OR10R3P-201ENST00000361688 942 ntBASIC5.91□□□□□ -1.46
TRIM48Q8IWZ4 Y_RNA.6-201ENST00000362350 114 ntBASIC5.91□□□□□ -1.46
TRIM48Q8IWZ4 RNU105B-201ENST00000364478 208 ntBASIC5.91□□□□□ -1.46
TRIM48Q8IWZ4 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
TRIM48Q8IWZ4 RNU6-1119P-201ENST00000384349 108 ntBASIC5.91□□□□□ -1.46
TRIM48Q8IWZ4 RNU6-185P-201ENST00000384421 107 ntBASIC5.91□□□□□ -1.46
TRIM48Q8IWZ4 SNORD65.1-201ENST00000390889 71 ntBASIC5.91□□□□□ -1.46
TRIM48Q8IWZ4 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
TRIM48Q8IWZ4 AL161449.1-201ENST00000414531 1199 ntBASIC5.91□□□□□ -1.46
TRIM48Q8IWZ4 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
TRIM48Q8IWZ4 RPS15AP30-201ENST00000420976 390 ntBASIC5.91□□□□□ -1.46
TRIM48Q8IWZ4 RPL7P44-201ENST00000424827 742 ntBASIC5.91□□□□□ -1.46
TRIM48Q8IWZ4 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC5.91□□□□□ -1.46
TRIM48Q8IWZ4 MED14P1-201ENST00000430517 648 ntBASIC5.91□□□□□ -1.46
TRIM48Q8IWZ4 FAM96AP1-201ENST00000430879 482 ntBASIC5.91□□□□□ -1.46
TRIM48Q8IWZ4 USP9YP22-201ENST00000438971 294 ntBASIC5.91□□□□□ -1.46
TRIM48Q8IWZ4 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC5.91□□□□□ -1.46
TRIM48Q8IWZ4 MTATP6P23-201ENST00000440153 476 ntBASIC5.91□□□□□ -1.46
TRIM48Q8IWZ4 AC093155.1-201ENST00000440164 826 ntBASIC5.91□□□□□ -1.46
TRIM48Q8IWZ4 USP9YP29-201ENST00000445112 563 ntBASIC5.91□□□□□ -1.46
TRIM48Q8IWZ4 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.91□□□□□ -1.46
TRIM48Q8IWZ4 RPL5P32-201ENST00000454085 879 ntBASIC5.91□□□□□ -1.46
TRIM48Q8IWZ4 HLA-DPA3-207ENST00000454398 229 ntBASIC5.91□□□□□ -1.46
TRIM48Q8IWZ4 AC112187.1-201ENST00000455837 479 ntBASIC5.91□□□□□ -1.46
TRIM48Q8IWZ4 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
TRIM48Q8IWZ4 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC5.91□□□□□ -1.46
TRIM48Q8IWZ4 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC5.91□□□□□ -1.46
TRIM48Q8IWZ4 RN7SL165P-201ENST00000477476 291 ntBASIC5.91□□□□□ -1.46
TRIM48Q8IWZ4 AC072039.1-201ENST00000477611 581 ntBASIC5.91□□□□□ -1.46
TRIM48Q8IWZ4 AC098583.1-201ENST00000480875 255 ntBASIC5.91□□□□□ -1.46
TRIM48Q8IWZ4 AC073522.1-201ENST00000483312 377 ntBASIC5.91□□□□□ -1.46
TRIM48Q8IWZ4 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.91□□□□□ -1.46
TRIM48Q8IWZ4 AOX3P-204ENST00000491025 2107 ntBASIC5.91□□□□□ -1.46
TRIM48Q8IWZ4 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
TRIM48Q8IWZ4 DYNLL1P6-201ENST00000503440 264 ntBASIC5.91□□□□□ -1.46
TRIM48Q8IWZ4 MTATP6P22-201ENST00000507369 598 ntBASIC5.91□□□□□ -1.46
TRIM48Q8IWZ4 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.91□□□□□ -1.46
TRIM48Q8IWZ4 SCARNA18.1-201ENST00000516330 83 ntBASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms