Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC3.6□□□□□ -1.83
VPS13CQ709C8 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC3.6□□□□□ -1.83
VPS13CQ709C8 AL021997.2-201ENST00000615674 271 ntBASIC3.6□□□□□ -1.83
VPS13CQ709C8 SLC7A14-201ENST00000231706 10103 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
VPS13CQ709C8 MGAM-208ENST00000549489 6525 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
VPS13CQ709C8 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
VPS13CQ709C8 OPCML-203ENST00000524381 6424 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
VPS13CQ709C8 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
VPS13CQ709C8 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
VPS13CQ709C8 AC009951.1-201ENST00000623674 2614 ntBASIC3.59□□□□□ -1.83
VPS13CQ709C8 NOL8P1-201ENST00000508336 3529 ntBASIC3.59□□□□□ -1.83
VPS13CQ709C8 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC3.59□□□□□ -1.83
VPS13CQ709C8 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
VPS13CQ709C8 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.59□□□□□ -1.83
VPS13CQ709C8 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.59□□□□□ -1.83
VPS13CQ709C8 RPS29P7-201ENST00000439662 171 ntBASIC3.59□□□□□ -1.83
VPS13CQ709C8 CYCSP32-201ENST00000440548 321 ntBASIC3.59□□□□□ -1.83
VPS13CQ709C8 RNA5SP246-201ENST00000458909 119 ntBASIC3.59□□□□□ -1.83
VPS13CQ709C8 ALG13-211ENST00000473389 693 ntTSL 2 BASIC3.59□□□□□ -1.83
VPS13CQ709C8 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC3.59□□□□□ -1.83
VPS13CQ709C8 AC015967.1-201ENST00000619893 476 ntBASIC3.59□□□□□ -1.83
VPS13CQ709C8 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.59□□□□□ -1.83
VPS13CQ709C8 AC093297.3-201ENST00000607056 2517 ntBASIC3.59□□□□□ -1.83
VPS13CQ709C8 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
VPS13CQ709C8 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC3.59□□□□□ -1.83
VPS13CQ709C8 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC3.59□□□□□ -1.83
VPS13CQ709C8 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC3.59□□□□□ -1.83
VPS13CQ709C8 NAA25-201ENST00000261745 6010 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
VPS13CQ709C8 USP6-201ENST00000250066 7976 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
VPS13CQ709C8 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
VPS13CQ709C8 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
VPS13CQ709C8 TFDP2-224ENST00000499676 9335 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
VPS13CQ709C8 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
VPS13CQ709C8 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
VPS13CQ709C8 RN7SKP284-201ENST00000411002 343 ntBASIC3.59□□□□□ -1.83
VPS13CQ709C8 OR4F13P-201ENST00000428478 931 ntBASIC3.59□□□□□ -1.83
VPS13CQ709C8 RPL23AP81-201ENST00000455252 467 ntBASIC3.59□□□□□ -1.83
VPS13CQ709C8 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.59□□□□□ -1.83
VPS13CQ709C8 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC3.59□□□□□ -1.83
VPS13CQ709C8 AC027667.1-201ENST00000545814 304 ntBASIC3.59□□□□□ -1.83
VPS13CQ709C8 MEG8-217ENST00000556637 924 ntTSL 5 BASIC3.59□□□□□ -1.83
VPS13CQ709C8 AC015908.5-201ENST00000623289 343 ntBASIC3.59□□□□□ -1.83
VPS13CQ709C8 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
VPS13CQ709C8 BMPR1APS1-201ENST00000403332 1598 ntBASIC3.59□□□□□ -1.83
VPS13CQ709C8 MAPK10-253ENST00000641010 4072 ntBASIC3.59□□□□□ -1.83
VPS13CQ709C8 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
VPS13CQ709C8 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
VPS13CQ709C8 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC3.59□□□□□ -1.83
VPS13CQ709C8 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC3.59□□□□□ -1.84
VPS13CQ709C8 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
VPS13CQ709C8 MUC3A-203ENST00000483366 9944 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.84
VPS13CQ709C8 AL445487.1-201ENST00000415694 1580 ntBASIC3.59□□□□□ -1.84
VPS13CQ709C8 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
VPS13CQ709C8 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC3.59□□□□□ -1.84
VPS13CQ709C8 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC3.59□□□□□ -1.84
VPS13CQ709C8 RHEBP2-201ENST00000450289 600 ntBASIC3.59□□□□□ -1.84
VPS13CQ709C8 PLGLA-201ENST00000465668 449 ntBASIC3.59□□□□□ -1.84
VPS13CQ709C8 UBE2DNL-203ENST00000474922 222 ntBASIC3.59□□□□□ -1.84
VPS13CQ709C8 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
VPS13CQ709C8 OR7A19P-201ENST00000608051 733 ntBASIC3.59□□□□□ -1.84
VPS13CQ709C8 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
VPS13CQ709C8 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
VPS13CQ709C8 MIR6500-201ENST00000622700 86 ntBASIC3.59□□□□□ -1.84
VPS13CQ709C8 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC3.59□□□□□ -1.84
VPS13CQ709C8 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC3.59□□□□□ -1.84
VPS13CQ709C8 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
VPS13CQ709C8 SLC30A8-205ENST00000519688 5242 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
VPS13CQ709C8 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC3.58□□□□□ -1.84
VPS13CQ709C8 RTL9-201ENST00000465301 5426 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
VPS13CQ709C8 CELF2-203ENST00000416382 6894 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
VPS13CQ709C8 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC3.58□□□□□ -1.84
VPS13CQ709C8 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
VPS13CQ709C8 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
VPS13CQ709C8 IL16-204ENST00000394660 9616 ntAPPRIS ALT2 TSL 2 BASIC3.58□□□□□ -1.84
VPS13CQ709C8 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
VPS13CQ709C8 AP000357.1-201ENST00000409926 1165 ntBASIC3.58□□□□□ -1.84
VPS13CQ709C8 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC3.58□□□□□ -1.84
VPS13CQ709C8 ARAFP1-201ENST00000422172 605 ntBASIC3.58□□□□□ -1.84
VPS13CQ709C8 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.58□□□□□ -1.84
VPS13CQ709C8 AL512326.1-201ENST00000443050 721 ntBASIC3.58□□□□□ -1.84
VPS13CQ709C8 AL162151.2-201ENST00000448875 158 ntBASIC3.58□□□□□ -1.84
VPS13CQ709C8 AL592156.1-201ENST00000508758 304 ntBASIC3.58□□□□□ -1.84
VPS13CQ709C8 PAICSP4-201ENST00000517543 1253 ntBASIC3.58□□□□□ -1.84
VPS13CQ709C8 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC3.58□□□□□ -1.84
VPS13CQ709C8 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC3.58□□□□□ -1.84
VPS13CQ709C8 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC3.58□□□□□ -1.84
VPS13CQ709C8 AL137141.1-201ENST00000624622 4836 ntBASIC3.58□□□□□ -1.84
VPS13CQ709C8 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC3.58□□□□□ -1.84
VPS13CQ709C8 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
VPS13CQ709C8 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.58□□□□□ -1.84
VPS13CQ709C8 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
VPS13CQ709C8 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.58□□□□□ -1.84
VPS13CQ709C8 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
VPS13CQ709C8 RN7SKP17-201ENST00000411242 351 ntBASIC3.58□□□□□ -1.84
VPS13CQ709C8 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC3.58□□□□□ -1.84
VPS13CQ709C8 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.58□□□□□ -1.84
VPS13CQ709C8 MIR7975-201ENST00000619350 68 ntBASIC3.58□□□□□ -1.84
VPS13CQ709C8 AC120036.2-201ENST00000509729 1474 ntBASIC3.58□□□□□ -1.84
VPS13CQ709C8 KAT6A-201ENST00000265713 9153 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
VPS13CQ709C8 HEPH-202ENST00000343002 4854 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms