Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
FAM78BQ5VT40 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
FAM78BQ5VT40 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC3.81□□□□□ -1.8
FAM78BQ5VT40 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
FAM78BQ5VT40 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC3.81□□□□□ -1.8
FAM78BQ5VT40 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
FAM78BQ5VT40 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
FAM78BQ5VT40 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
FAM78BQ5VT40 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
FAM78BQ5VT40 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
FAM78BQ5VT40 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
FAM78BQ5VT40 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
FAM78BQ5VT40 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC3.8□□□□□ -1.8
FAM78BQ5VT40 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
FAM78BQ5VT40 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC3.8□□□□□ -1.8
FAM78BQ5VT40 SNORA17.1-201ENST00000362945 126 ntBASIC3.8□□□□□ -1.8
FAM78BQ5VT40 AL021331.1-201ENST00000402817 582 ntBASIC3.8□□□□□ -1.8
FAM78BQ5VT40 SNORA11.3-201ENST00000408471 128 ntBASIC3.8□□□□□ -1.8
FAM78BQ5VT40 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
FAM78BQ5VT40 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
FAM78BQ5VT40 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC3.8□□□□□ -1.8
FAM78BQ5VT40 TRAPPC2P10-201ENST00000415662 323 ntBASIC3.8□□□□□ -1.8
FAM78BQ5VT40 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC3.8□□□□□ -1.8
FAM78BQ5VT40 HNRNPA3P4-201ENST00000427514 803 ntBASIC3.8□□□□□ -1.8
FAM78BQ5VT40 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
FAM78BQ5VT40 AC069285.2-201ENST00000440210 275 ntBASIC3.8□□□□□ -1.8
FAM78BQ5VT40 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
FAM78BQ5VT40 FHP1-201ENST00000442741 703 ntBASIC3.8□□□□□ -1.8
FAM78BQ5VT40 VN1R96P-201ENST00000446052 858 ntBASIC3.8□□□□□ -1.8
FAM78BQ5VT40 IFNWP4-201ENST00000453148 294 ntBASIC3.8□□□□□ -1.8
FAM78BQ5VT40 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC3.8□□□□□ -1.8
FAM78BQ5VT40 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC3.8□□□□□ -1.8
FAM78BQ5VT40 AC026688.1-201ENST00000520639 1168 ntBASIC3.8□□□□□ -1.8
FAM78BQ5VT40 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
FAM78BQ5VT40 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
FAM78BQ5VT40 SNORA74C-1-201ENST00000580726 201 ntBASIC3.8□□□□□ -1.8
FAM78BQ5VT40 EIF1P5-201ENST00000585002 234 ntBASIC3.8□□□□□ -1.8
FAM78BQ5VT40 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC3.8□□□□□ -1.8
FAM78BQ5VT40 AC095055.1-201ENST00000603472 1113 ntBASIC3.8□□□□□ -1.8
FAM78BQ5VT40 AL713998.2-201ENST00000604538 1198 ntBASIC3.8□□□□□ -1.8
FAM78BQ5VT40 AL512329.2-201ENST00000607350 548 ntBASIC3.8□□□□□ -1.8
FAM78BQ5VT40 5S_rRNA.16-201ENST00000612928 119 ntBASIC3.8□□□□□ -1.8
FAM78BQ5VT40 SNORA11.6-201ENST00000619030 128 ntBASIC3.8□□□□□ -1.8
FAM78BQ5VT40 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
FAM78BQ5VT40 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC3.8□□□□□ -1.8
FAM78BQ5VT40 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
FAM78BQ5VT40 AC027290.2-201ENST00000623210 18662 ntBASIC3.8□□□□□ -1.8
FAM78BQ5VT40 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC3.8□□□□□ -1.8
FAM78BQ5VT40 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
FAM78BQ5VT40 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
FAM78BQ5VT40 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
FAM78BQ5VT40 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
FAM78BQ5VT40 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
FAM78BQ5VT40 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
FAM78BQ5VT40 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
FAM78BQ5VT40 AL136116.2-201ENST00000404020 785 ntBASIC3.79□□□□□ -1.8
FAM78BQ5VT40 AL080315.1-201ENST00000406055 466 ntBASIC3.79□□□□□ -1.8
FAM78BQ5VT40 DUTP5-201ENST00000406790 469 ntBASIC3.79□□□□□ -1.8
FAM78BQ5VT40 MIR1286-201ENST00000408112 78 ntBASIC3.79□□□□□ -1.8
FAM78BQ5VT40 AP000534.2-201ENST00000412729 568 ntBASIC3.79□□□□□ -1.8
FAM78BQ5VT40 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
FAM78BQ5VT40 RPS6P12-201ENST00000432491 726 ntBASIC3.79□□□□□ -1.8
FAM78BQ5VT40 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC3.79□□□□□ -1.8
FAM78BQ5VT40 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC3.79□□□□□ -1.8
FAM78BQ5VT40 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC3.79□□□□□ -1.8
FAM78BQ5VT40 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC3.79□□□□□ -1.8
FAM78BQ5VT40 TDGF1P1-201ENST00000445734 527 ntBASIC3.79□□□□□ -1.8
FAM78BQ5VT40 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC3.79□□□□□ -1.8
FAM78BQ5VT40 PPIAP20-201ENST00000449839 135 ntBASIC3.79□□□□□ -1.8
FAM78BQ5VT40 IGHV5-78-201ENST00000450948 295 ntBASIC3.79□□□□□ -1.8
FAM78BQ5VT40 AC016724.1-201ENST00000453215 421 ntBASIC3.79□□□□□ -1.8
FAM78BQ5VT40 APOA2-207ENST00000470459 416 ntTSL 5 BASIC3.79□□□□□ -1.8
FAM78BQ5VT40 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC3.79□□□□□ -1.8
FAM78BQ5VT40 RN7SKP260-201ENST00000516907 149 ntBASIC3.79□□□□□ -1.8
FAM78BQ5VT40 RNU6-709P-201ENST00000517257 104 ntBASIC3.79□□□□□ -1.8
FAM78BQ5VT40 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC3.79□□□□□ -1.8
FAM78BQ5VT40 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC3.79□□□□□ -1.8
FAM78BQ5VT40 NMNAT1P1-201ENST00000554095 876 ntBASIC3.79□□□□□ -1.8
FAM78BQ5VT40 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC3.79□□□□□ -1.8
FAM78BQ5VT40 AC007225.2-201ENST00000562529 256 ntBASIC3.79□□□□□ -1.8
FAM78BQ5VT40 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC3.79□□□□□ -1.8
FAM78BQ5VT40 HNRNPCP4-201ENST00000571636 900 ntBASIC3.79□□□□□ -1.8
FAM78BQ5VT40 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
FAM78BQ5VT40 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC3.79□□□□□ -1.8
FAM78BQ5VT40 MIR6768-201ENST00000610734 72 ntBASIC3.79□□□□□ -1.8
FAM78BQ5VT40 AC126915.2-201ENST00000610957 190 ntBASIC3.79□□□□□ -1.8
FAM78BQ5VT40 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
FAM78BQ5VT40 AL669942.2-201ENST00000620352 697 ntBASIC3.79□□□□□ -1.8
FAM78BQ5VT40 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC3.79□□□□□ -1.8
FAM78BQ5VT40 AC006453.5-201ENST00000636451 619 ntBASIC3.79□□□□□ -1.8
FAM78BQ5VT40 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC3.79□□□□□ -1.8
FAM78BQ5VT40 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
FAM78BQ5VT40 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC3.79□□□□□ -1.8
FAM78BQ5VT40 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.79□□□□□ -1.8
FAM78BQ5VT40 AL049555.1-201ENST00000562834 1933 ntBASIC3.79□□□□□ -1.8
FAM78BQ5VT40 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
FAM78BQ5VT40 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
FAM78BQ5VT40 BX005019.1-201ENST00000561881 1810 ntBASIC3.79□□□□□ -1.8
FAM78BQ5VT40 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
FAM78BQ5VT40 KPNA2P2-201ENST00000419546 1489 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 123.9 ms