Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
GABPAQ06546 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
GABPAQ06546 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
GABPAQ06546 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
GABPAQ06546 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
GABPAQ06546 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
GABPAQ06546 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.46□□□□□ -1.53
GABPAQ06546 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.46□□□□□ -1.53
GABPAQ06546 AC104623.2-202ENST00000623477 4002 ntBASIC5.46□□□□□ -1.53
GABPAQ06546 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
GABPAQ06546 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.46□□□□□ -1.53
GABPAQ06546 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
GABPAQ06546 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.46□□□□□ -1.54
GABPAQ06546 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC5.46□□□□□ -1.54
GABPAQ06546 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
GABPAQ06546 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
GABPAQ06546 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC5.46□□□□□ -1.54
GABPAQ06546 RPL23AP59-201ENST00000399415 461 ntBASIC5.46□□□□□ -1.54
GABPAQ06546 RPL12P34-201ENST00000424532 479 ntBASIC5.46□□□□□ -1.54
GABPAQ06546 AC023141.6-201ENST00000429418 337 ntBASIC5.46□□□□□ -1.54
GABPAQ06546 AC004938.1-201ENST00000438468 308 ntBASIC5.46□□□□□ -1.54
GABPAQ06546 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
GABPAQ06546 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.46□□□□□ -1.54
GABPAQ06546 MTCYBP14-201ENST00000457471 715 ntBASIC5.46□□□□□ -1.54
GABPAQ06546 RPS23P7-201ENST00000466210 444 ntBASIC5.46□□□□□ -1.54
GABPAQ06546 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
GABPAQ06546 AC104763.1-201ENST00000475274 360 ntBASIC5.46□□□□□ -1.54
GABPAQ06546 AC090686.1-201ENST00000481577 749 ntBASIC5.46□□□□□ -1.54
GABPAQ06546 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
GABPAQ06546 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC5.46□□□□□ -1.54
GABPAQ06546 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.46□□□□□ -1.54
GABPAQ06546 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC5.46□□□□□ -1.54
GABPAQ06546 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC5.46□□□□□ -1.54
GABPAQ06546 AL359757.1-201ENST00000623176 255 ntBASIC5.46□□□□□ -1.54
GABPAQ06546 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.46□□□□□ -1.54
GABPAQ06546 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.46□□□□□ -1.54
GABPAQ06546 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.46□□□□□ -1.54
GABPAQ06546 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
GABPAQ06546 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
GABPAQ06546 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
GABPAQ06546 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
GABPAQ06546 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
GABPAQ06546 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.45□□□□□ -1.54
GABPAQ06546 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
GABPAQ06546 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
GABPAQ06546 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.45□□□□□ -1.54
GABPAQ06546 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.45□□□□□ -1.54
GABPAQ06546 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
GABPAQ06546 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.45□□□□□ -1.54
GABPAQ06546 COX6CP17-201ENST00000421389 185 ntBASIC5.45□□□□□ -1.54
GABPAQ06546 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC5.45□□□□□ -1.54
GABPAQ06546 RPL7AP25-201ENST00000423357 805 ntBASIC5.45□□□□□ -1.54
GABPAQ06546 UBE2V2P3-201ENST00000433562 437 ntBASIC5.45□□□□□ -1.54
GABPAQ06546 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.45□□□□□ -1.54
GABPAQ06546 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC5.45□□□□□ -1.54
GABPAQ06546 NPM1P21-201ENST00000513394 762 ntBASIC5.45□□□□□ -1.54
GABPAQ06546 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.45□□□□□ -1.54
GABPAQ06546 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC5.45□□□□□ -1.54
GABPAQ06546 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC5.45□□□□□ -1.54
GABPAQ06546 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.45□□□□□ -1.54
GABPAQ06546 AL445423.1-201ENST00000609941 536 ntBASIC5.45□□□□□ -1.54
GABPAQ06546 AC012409.3-201ENST00000611343 981 ntBASIC5.45□□□□□ -1.54
GABPAQ06546 AL133243.1-201ENST00000614487 366 ntBASIC5.45□□□□□ -1.54
GABPAQ06546 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.45□□□□□ -1.54
GABPAQ06546 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
GABPAQ06546 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
GABPAQ06546 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
GABPAQ06546 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
GABPAQ06546 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC5.45□□□□□ -1.54
GABPAQ06546 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
GABPAQ06546 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
GABPAQ06546 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.45□□□□□ -1.54
GABPAQ06546 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
GABPAQ06546 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.44□□□□□ -1.54
GABPAQ06546 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.44□□□□□ -1.54
GABPAQ06546 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
GABPAQ06546 MTCO1P15-201ENST00000529569 1526 ntBASIC5.44□□□□□ -1.54
GABPAQ06546 AC120338.1-201ENST00000625074 1541 ntBASIC5.44□□□□□ -1.54
GABPAQ06546 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
GABPAQ06546 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.44□□□□□ -1.54
GABPAQ06546 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
GABPAQ06546 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
GABPAQ06546 OR1F12-201ENST00000402365 945 ntBASIC5.44□□□□□ -1.54
GABPAQ06546 RNU4-25P-201ENST00000410569 230 ntBASIC5.44□□□□□ -1.54
GABPAQ06546 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.44□□□□□ -1.54
GABPAQ06546 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC5.44□□□□□ -1.54
GABPAQ06546 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC5.44□□□□□ -1.54
GABPAQ06546 MTND2P28-201ENST00000457540 1044 ntBASIC5.44□□□□□ -1.54
GABPAQ06546 AC104849.1-201ENST00000462623 405 ntBASIC5.44□□□□□ -1.54
GABPAQ06546 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
GABPAQ06546 GOLGA5P1-201ENST00000507317 980 ntBASIC5.44□□□□□ -1.54
GABPAQ06546 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
GABPAQ06546 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
GABPAQ06546 AC022784.5-201ENST00000522241 437 ntBASIC5.44□□□□□ -1.54
GABPAQ06546 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
GABPAQ06546 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC5.44□□□□□ -1.54
GABPAQ06546 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.44□□□□□ -1.54
GABPAQ06546 AC015804.1-201ENST00000622935 435 ntBASIC5.44□□□□□ -1.54
GABPAQ06546 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
GABPAQ06546 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms