Protein–RNA interactions for Protein: P60608

ERVFC1-1, Endogenous retrovirus group FC1 member 1 Env polyprotein, humanhuman

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1-1P60608 AC138938.1-201ENST00000515431 782 ntBASIC4.37□□□□□ -1.71
ERVFC1-1P60608 SNORA74.1-201ENST00000516320 180 ntBASIC4.37□□□□□ -1.71
ERVFC1-1P60608 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC4.37□□□□□ -1.71
ERVFC1-1P60608 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC4.37□□□□□ -1.71
ERVFC1-1P60608 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
ERVFC1-1P60608 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.37□□□□□ -1.71
ERVFC1-1P60608 AC013640.1-201ENST00000565366 565 ntTSL 3 BASIC4.37□□□□□ -1.71
ERVFC1-1P60608 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC4.37□□□□□ -1.71
ERVFC1-1P60608 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.37□□□□□ -1.71
ERVFC1-1P60608 MTND4LP24-201ENST00000572277 291 ntBASIC4.37□□□□□ -1.71
ERVFC1-1P60608 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC4.37□□□□□ -1.71
ERVFC1-1P60608 RN7SL435P-201ENST00000584418 282 ntBASIC4.37□□□□□ -1.71
ERVFC1-1P60608 AP002884.5-201ENST00000595053 1132 ntBASIC4.37□□□□□ -1.71
ERVFC1-1P60608 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC4.37□□□□□ -1.71
ERVFC1-1P60608 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
ERVFC1-1P60608 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC4.37□□□□□ -1.71
ERVFC1-1P60608 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC4.37□□□□□ -1.71
ERVFC1-1P60608 AL020997.3-201ENST00000602843 359 ntBASIC4.37□□□□□ -1.71
ERVFC1-1P60608 AP002906.1-201ENST00000603405 233 ntBASIC4.37□□□□□ -1.71
ERVFC1-1P60608 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC4.37□□□□□ -1.71
ERVFC1-1P60608 AC067838.1-201ENST00000606064 577 ntBASIC4.37□□□□□ -1.71
ERVFC1-1P60608 AC096861.1-201ENST00000616652 240 ntBASIC4.37□□□□□ -1.71
ERVFC1-1P60608 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
ERVFC1-1P60608 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC4.37□□□□□ -1.71
ERVFC1-1P60608 AC074140.1-201ENST00000621617 208 ntBASIC4.37□□□□□ -1.71
ERVFC1-1P60608 DRG1-207ENST00000629688 309 ntTSL 5 BASIC4.37□□□□□ -1.71
ERVFC1-1P60608 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC4.37□□□□□ -1.71
ERVFC1-1P60608 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
ERVFC1-1P60608 AL596275.2-204ENST00000641628 552 ntBASIC4.37□□□□□ -1.71
ERVFC1-1P60608 AL596275.2-206ENST00000641957 626 ntBASIC4.37□□□□□ -1.71
ERVFC1-1P60608 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
ERVFC1-1P60608 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
ERVFC1-1P60608 OR4F13P-202ENST00000560066 2054 ntBASIC4.37□□□□□ -1.71
ERVFC1-1P60608 ATP5A1P1-201ENST00000454088 1321 ntBASIC4.37□□□□□ -1.71
ERVFC1-1P60608 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
ERVFC1-1P60608 MTND4P10-201ENST00000446199 1363 ntBASIC4.37□□□□□ -1.71
ERVFC1-1P60608 AC079097.1-201ENST00000512187 1399 ntBASIC4.37□□□□□ -1.71
ERVFC1-1P60608 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.37□□□□□ -1.71
ERVFC1-1P60608 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC4.37□□□□□ -1.71
ERVFC1-1P60608 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
ERVFC1-1P60608 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
ERVFC1-1P60608 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
ERVFC1-1P60608 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC4.37□□□□□ -1.71
ERVFC1-1P60608 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
ERVFC1-1P60608 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
ERVFC1-1P60608 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
ERVFC1-1P60608 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
ERVFC1-1P60608 PSG10P-201ENST00000501199 1500 ntBASIC4.36□□□□□ -1.71
ERVFC1-1P60608 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
ERVFC1-1P60608 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC4.36□□□□□ -1.71
ERVFC1-1P60608 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
ERVFC1-1P60608 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.36□□□□□ -1.71
ERVFC1-1P60608 MFSD8-219ENST00000641228 2559 ntBASIC4.36□□□□□ -1.71
ERVFC1-1P60608 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC4.36□□□□□ -1.71
ERVFC1-1P60608 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.36□□□□□ -1.71
ERVFC1-1P60608 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
ERVFC1-1P60608 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC4.36□□□□□ -1.71
ERVFC1-1P60608 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
ERVFC1-1P60608 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
ERVFC1-1P60608 RNU4-24P-201ENST00000364565 139 ntBASIC4.36□□□□□ -1.71
ERVFC1-1P60608 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
ERVFC1-1P60608 AL672167.2-201ENST00000377164 879 ntBASIC4.36□□□□□ -1.71
ERVFC1-1P60608 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
ERVFC1-1P60608 RNU4-74P-201ENST00000411280 161 ntBASIC4.36□□□□□ -1.71
ERVFC1-1P60608 MTND4P22-201ENST00000413116 1169 ntBASIC4.36□□□□□ -1.71
ERVFC1-1P60608 BTF3L4P1-201ENST00000413813 468 ntBASIC4.36□□□□□ -1.71
ERVFC1-1P60608 RPS7P9-201ENST00000414704 586 ntBASIC4.36□□□□□ -1.71
ERVFC1-1P60608 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC4.36□□□□□ -1.71
ERVFC1-1P60608 RPL21P50-201ENST00000417698 477 ntBASIC4.36□□□□□ -1.71
ERVFC1-1P60608 PTP4A1P5-201ENST00000420305 455 ntBASIC4.36□□□□□ -1.71
ERVFC1-1P60608 AC023128.2-201ENST00000420880 1223 ntBASIC4.36□□□□□ -1.71
ERVFC1-1P60608 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
ERVFC1-1P60608 TMEM183AP1-205ENST00000432739 290 ntBASIC4.36□□□□□ -1.71
ERVFC1-1P60608 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.36□□□□□ -1.71
ERVFC1-1P60608 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC4.36□□□□□ -1.71
ERVFC1-1P60608 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC4.36□□□□□ -1.71
ERVFC1-1P60608 ARL4AP3-201ENST00000441452 574 ntBASIC4.36□□□□□ -1.71
ERVFC1-1P60608 AC015983.1-201ENST00000441577 373 ntBASIC4.36□□□□□ -1.71
ERVFC1-1P60608 AC023141.8-201ENST00000442554 208 ntBASIC4.36□□□□□ -1.71
ERVFC1-1P60608 MRPL35P2-201ENST00000448009 511 ntBASIC4.36□□□□□ -1.71
ERVFC1-1P60608 MYO5BP2-201ENST00000449815 1277 ntBASIC4.36□□□□□ -1.71
ERVFC1-1P60608 AL645937.3-201ENST00000453647 936 ntBASIC4.36□□□□□ -1.71
ERVFC1-1P60608 MTCO3P16-201ENST00000454456 754 ntBASIC4.36□□□□□ -1.71
ERVFC1-1P60608 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC4.36□□□□□ -1.71
ERVFC1-1P60608 AC245028.2-201ENST00000458673 253 ntBASIC4.36□□□□□ -1.71
ERVFC1-1P60608 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC4.36□□□□□ -1.71
ERVFC1-1P60608 GM2AP2-201ENST00000491764 562 ntBASIC4.36□□□□□ -1.71
ERVFC1-1P60608 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.36□□□□□ -1.71
ERVFC1-1P60608 MYL12BP2-201ENST00000503948 512 ntBASIC4.36□□□□□ -1.71
ERVFC1-1P60608 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC4.36□□□□□ -1.71
ERVFC1-1P60608 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC4.36□□□□□ -1.71
ERVFC1-1P60608 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC4.36□□□□□ -1.71
ERVFC1-1P60608 AC093664.1-201ENST00000511779 289 ntBASIC4.36□□□□□ -1.71
ERVFC1-1P60608 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC4.36□□□□□ -1.71
ERVFC1-1P60608 AC098976.1-201ENST00000513014 541 ntBASIC4.36□□□□□ -1.71
ERVFC1-1P60608 RN7SKP34-201ENST00000516142 244 ntBASIC4.36□□□□□ -1.71
ERVFC1-1P60608 RNA5SP473-201ENST00000516402 125 ntBASIC4.36□□□□□ -1.71
ERVFC1-1P60608 RNU5A-4P-201ENST00000516588 111 ntBASIC4.36□□□□□ -1.71
ERVFC1-1P60608 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC4.36□□□□□ -1.71
ERVFC1-1P60608 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms