Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC4.92□□□□□ -1.62
CDH13P55290 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.92□□□□□ -1.62
CDH13P55290 RN7SL441P-201ENST00000492388 296 ntBASIC4.92□□□□□ -1.62
CDH13P55290 AC073073.1-201ENST00000493920 463 ntBASIC4.92□□□□□ -1.62
CDH13P55290 AC108693.1-201ENST00000496068 432 ntBASIC4.92□□□□□ -1.62
CDH13P55290 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.92□□□□□ -1.62
CDH13P55290 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.92□□□□□ -1.62
CDH13P55290 HMGN1P15-201ENST00000513870 295 ntBASIC4.92□□□□□ -1.62
CDH13P55290 SNORA31.13-201ENST00000516624 135 ntBASIC4.92□□□□□ -1.62
CDH13P55290 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.92□□□□□ -1.62
CDH13P55290 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC4.92□□□□□ -1.62
CDH13P55290 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC4.92□□□□□ -1.62
CDH13P55290 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CDH13P55290 AC005868.1-201ENST00000536421 331 ntBASIC4.92□□□□□ -1.62
CDH13P55290 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC4.92□□□□□ -1.62
CDH13P55290 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC4.92□□□□□ -1.62
CDH13P55290 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.92□□□□□ -1.62
CDH13P55290 SULT1C2P2-201ENST00000562517 294 ntBASIC4.92□□□□□ -1.62
CDH13P55290 FKBP1AP1-201ENST00000594588 318 ntBASIC4.92□□□□□ -1.62
CDH13P55290 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.92□□□□□ -1.62
CDH13P55290 AC090527.3-201ENST00000619041 548 ntBASIC4.92□□□□□ -1.62
CDH13P55290 AC026124.2-201ENST00000621847 656 ntBASIC4.92□□□□□ -1.62
CDH13P55290 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC4.92□□□□□ -1.62
CDH13P55290 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.92□□□□□ -1.62
CDH13P55290 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.92□□□□□ -1.62
CDH13P55290 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.92□□□□□ -1.62
CDH13P55290 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CDH13P55290 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
CDH13P55290 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.92□□□□□ -1.62
CDH13P55290 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.92□□□□□ -1.62
CDH13P55290 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
CDH13P55290 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
CDH13P55290 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.91□□□□□ -1.62
CDH13P55290 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.91□□□□□ -1.62
CDH13P55290 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
CDH13P55290 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CDH13P55290 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
CDH13P55290 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CDH13P55290 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.91□□□□□ -1.62
CDH13P55290 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CDH13P55290 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
CDH13P55290 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
CDH13P55290 RNA5SP183-201ENST00000362452 119 ntBASIC4.91□□□□□ -1.62
CDH13P55290 RNU1-43P-201ENST00000365052 165 ntBASIC4.91□□□□□ -1.62
CDH13P55290 UBBP2-201ENST00000376781 231 ntBASIC4.91□□□□□ -1.62
CDH13P55290 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
CDH13P55290 RN7SKP114-201ENST00000410327 279 ntBASIC4.91□□□□□ -1.62
CDH13P55290 AC010385.1-201ENST00000412374 256 ntBASIC4.91□□□□□ -1.62
CDH13P55290 AL158050.1-201ENST00000416077 457 ntBASIC4.91□□□□□ -1.62
CDH13P55290 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.91□□□□□ -1.62
CDH13P55290 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.91□□□□□ -1.62
CDH13P55290 OR6C64P-201ENST00000419708 825 ntBASIC4.91□□□□□ -1.62
CDH13P55290 AC092570.3-201ENST00000420113 693 ntBASIC4.91□□□□□ -1.62
CDH13P55290 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.91□□□□□ -1.62
CDH13P55290 OR2AH1P-201ENST00000425717 928 ntBASIC4.91□□□□□ -1.62
CDH13P55290 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4.91□□□□□ -1.62
CDH13P55290 CFL1P1-202ENST00000432948 411 ntBASIC4.91□□□□□ -1.62
CDH13P55290 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC4.91□□□□□ -1.62
CDH13P55290 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.91□□□□□ -1.62
CDH13P55290 AL450023.3-201ENST00000440592 271 ntBASIC4.91□□□□□ -1.62
CDH13P55290 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.91□□□□□ -1.62
CDH13P55290 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.91□□□□□ -1.62
CDH13P55290 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CDH13P55290 RPS20P4-201ENST00000461659 355 ntBASIC4.91□□□□□ -1.62
CDH13P55290 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.91□□□□□ -1.62
CDH13P55290 AC015908.1-201ENST00000478739 476 ntBASIC4.91□□□□□ -1.62
CDH13P55290 AC104629.1-201ENST00000494226 508 ntBASIC4.91□□□□□ -1.62
CDH13P55290 AC093890.1-201ENST00000502554 540 ntBASIC4.91□□□□□ -1.62
CDH13P55290 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.91□□□□□ -1.62
CDH13P55290 AC112206.4-201ENST00000515142 405 ntBASIC4.91□□□□□ -1.62
CDH13P55290 RPL23AP53-201ENST00000521854 457 ntBASIC4.91□□□□□ -1.62
CDH13P55290 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.91□□□□□ -1.62
CDH13P55290 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC4.91□□□□□ -1.62
CDH13P55290 AC024940.3-201ENST00000538551 316 ntBASIC4.91□□□□□ -1.62
CDH13P55290 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
CDH13P55290 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.91□□□□□ -1.62
CDH13P55290 SMARCE1P3-201ENST00000553649 1231 ntBASIC4.91□□□□□ -1.62
CDH13P55290 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.91□□□□□ -1.62
CDH13P55290 AC116553.2-201ENST00000564203 463 ntBASIC4.91□□□□□ -1.62
CDH13P55290 AL390726.5-202ENST00000564800 256 ntBASIC4.91□□□□□ -1.62
CDH13P55290 DPRXP4-201ENST00000578053 568 ntBASIC4.91□□□□□ -1.62
CDH13P55290 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC4.91□□□□□ -1.62
CDH13P55290 AC079610.2-201ENST00000604818 690 ntBASIC4.91□□□□□ -1.62
CDH13P55290 MIR8084-201ENST00000614105 89 ntBASIC4.91□□□□□ -1.62
CDH13P55290 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CDH13P55290 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CDH13P55290 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CDH13P55290 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.91□□□□□ -1.62
CDH13P55290 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CDH13P55290 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CDH13P55290 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
CDH13P55290 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.62
CDH13P55290 CCT8P1-201ENST00000413611 1657 ntBASIC4.9□□□□□ -1.62
CDH13P55290 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
CDH13P55290 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.9□□□□□ -1.62
CDH13P55290 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
CDH13P55290 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
CDH13P55290 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
CDH13P55290 MIR1271-201ENST00000408537 86 ntBASIC4.9□□□□□ -1.63
CDH13P55290 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms