Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
GPC3P51654 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
GPC3P51654 RNU6-386P-201ENST00000362650 107 ntBASIC5.37□□□□□ -1.55
GPC3P51654 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
GPC3P51654 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
GPC3P51654 RNU6-398P-201ENST00000384143 109 ntBASIC5.37□□□□□ -1.55
GPC3P51654 U3.30-201ENST00000391308 210 ntBASIC5.37□□□□□ -1.55
GPC3P51654 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
GPC3P51654 AC114755.2-201ENST00000413520 361 ntBASIC5.37□□□□□ -1.55
GPC3P51654 QRSL1P2-201ENST00000418582 964 ntBASIC5.37□□□□□ -1.55
GPC3P51654 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.37□□□□□ -1.55
GPC3P51654 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC5.37□□□□□ -1.55
GPC3P51654 AC069277.2-201ENST00000454211 432 ntBASIC5.37□□□□□ -1.55
GPC3P51654 AC093166.2-201ENST00000455969 1017 ntBASIC5.37□□□□□ -1.55
GPC3P51654 GYG1P1-201ENST00000460864 698 ntBASIC5.37□□□□□ -1.55
GPC3P51654 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.37□□□□□ -1.55
GPC3P51654 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.37□□□□□ -1.55
GPC3P51654 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.37□□□□□ -1.55
GPC3P51654 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC5.37□□□□□ -1.55
GPC3P51654 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC5.37□□□□□ -1.55
GPC3P51654 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC5.37□□□□□ -1.55
GPC3P51654 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.37□□□□□ -1.55
GPC3P51654 SOX5P1-201ENST00000524155 1127 ntBASIC5.37□□□□□ -1.55
GPC3P51654 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC5.37□□□□□ -1.55
GPC3P51654 AC084033.1-201ENST00000550830 633 ntBASIC5.37□□□□□ -1.55
GPC3P51654 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC5.37□□□□□ -1.55
GPC3P51654 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.37□□□□□ -1.55
GPC3P51654 SNX6P1-201ENST00000601728 1224 ntBASIC5.37□□□□□ -1.55
GPC3P51654 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
GPC3P51654 AL022401.1-201ENST00000619498 108 ntBASIC5.37□□□□□ -1.55
GPC3P51654 AP002967.1-201ENST00000624203 539 ntBASIC5.37□□□□□ -1.55
GPC3P51654 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC5.37□□□□□ -1.55
GPC3P51654 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.37□□□□□ -1.55
GPC3P51654 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
GPC3P51654 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.37□□□□□ -1.55
GPC3P51654 NCLP2-201ENST00000416078 1462 ntBASIC5.37□□□□□ -1.55
GPC3P51654 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
GPC3P51654 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
GPC3P51654 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.37□□□□□ -1.55
GPC3P51654 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
GPC3P51654 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.36□□□□□ -1.55
GPC3P51654 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
GPC3P51654 THAP12P5-201ENST00000405864 2275 ntBASIC5.36□□□□□ -1.55
GPC3P51654 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
GPC3P51654 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
GPC3P51654 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
GPC3P51654 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.36□□□□□ -1.55
GPC3P51654 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
GPC3P51654 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
GPC3P51654 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
GPC3P51654 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
GPC3P51654 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
GPC3P51654 RNA5SP505-201ENST00000364748 108 ntBASIC5.36□□□□□ -1.55
GPC3P51654 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
GPC3P51654 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
GPC3P51654 RSU1P3-201ENST00000412878 835 ntBASIC5.36□□□□□ -1.55
GPC3P51654 BX510359.2-201ENST00000417920 305 ntBASIC5.36□□□□□ -1.55
GPC3P51654 RPL23AP4-201ENST00000427757 463 ntBASIC5.36□□□□□ -1.55
GPC3P51654 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC5.36□□□□□ -1.55
GPC3P51654 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC5.36□□□□□ -1.55
GPC3P51654 AC005154.2-201ENST00000438110 379 ntBASIC5.36□□□□□ -1.55
GPC3P51654 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC5.36□□□□□ -1.55
GPC3P51654 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.36□□□□□ -1.55
GPC3P51654 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC5.36□□□□□ -1.55
GPC3P51654 AC026688.1-201ENST00000520639 1168 ntBASIC5.36□□□□□ -1.55
GPC3P51654 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC5.36□□□□□ -1.55
GPC3P51654 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC5.36□□□□□ -1.55
GPC3P51654 HIGD1AP5-201ENST00000529959 259 ntBASIC5.36□□□□□ -1.55
GPC3P51654 OR5AN2P-201ENST00000534535 896 ntBASIC5.36□□□□□ -1.55
GPC3P51654 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.36□□□□□ -1.55
GPC3P51654 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
GPC3P51654 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC5.36□□□□□ -1.55
GPC3P51654 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC5.36□□□□□ -1.55
GPC3P51654 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC5.36□□□□□ -1.55
GPC3P51654 AP000346.3-201ENST00000622821 210 ntBASIC5.36□□□□□ -1.55
GPC3P51654 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
GPC3P51654 AC110792.3-201ENST00000595906 1614 ntBASIC5.36□□□□□ -1.55
GPC3P51654 AC008758.3-201ENST00000507003 1829 ntBASIC5.36□□□□□ -1.55
GPC3P51654 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
GPC3P51654 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
GPC3P51654 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
GPC3P51654 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.36□□□□□ -1.55
GPC3P51654 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
GPC3P51654 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
GPC3P51654 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.35□□□□□ -1.55
GPC3P51654 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
GPC3P51654 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
GPC3P51654 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
GPC3P51654 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.35□□□□□ -1.55
GPC3P51654 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
GPC3P51654 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
GPC3P51654 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.35□□□□□ -1.55
GPC3P51654 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
GPC3P51654 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC5.35□□□□□ -1.55
GPC3P51654 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
GPC3P51654 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
GPC3P51654 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
GPC3P51654 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
GPC3P51654 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
GPC3P51654 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms