Protein–RNA interactions for Protein: P48443

RXRG, Retinoic acid receptor RXR-gamma, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRGP48443 AC005005.4-201ENST00000623789 16698 ntBASIC5.41□□□□□ -1.54
RXRGP48443 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RXRGP48443 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
RXRGP48443 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.41□□□□□ -1.54
RXRGP48443 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.41□□□□□ -1.54
RXRGP48443 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
RXRGP48443 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.41□□□□□ -1.54
RXRGP48443 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RXRGP48443 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
RXRGP48443 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.4□□□□□ -1.54
RXRGP48443 VN2R3P-201ENST00000422626 1412 ntBASIC5.4□□□□□ -1.54
RXRGP48443 USP9YP4-201ENST00000424401 1745 ntBASIC5.4□□□□□ -1.54
RXRGP48443 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.4□□□□□ -1.54
RXRGP48443 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
RXRGP48443 AC100871.1-201ENST00000507871 1456 ntBASIC5.4□□□□□ -1.54
RXRGP48443 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
RXRGP48443 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
RXRGP48443 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
RXRGP48443 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
RXRGP48443 RNA5SP305-201ENST00000362665 119 ntBASIC5.4□□□□□ -1.54
RXRGP48443 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
RXRGP48443 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.4□□□□□ -1.54
RXRGP48443 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC5.4□□□□□ -1.54
RXRGP48443 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.4□□□□□ -1.54
RXRGP48443 AC007161.1-204ENST00000423039 460 ntBASIC5.4□□□□□ -1.54
RXRGP48443 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.4□□□□□ -1.54
RXRGP48443 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC5.4□□□□□ -1.54
RXRGP48443 UBE2D3P3-201ENST00000426992 425 ntBASIC5.4□□□□□ -1.54
RXRGP48443 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC5.4□□□□□ -1.54
RXRGP48443 AL450263.2-201ENST00000439400 589 ntBASIC5.4□□□□□ -1.54
RXRGP48443 LINC02210-201ENST00000444561 288 ntBASIC5.4□□□□□ -1.54
RXRGP48443 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC5.4□□□□□ -1.54
RXRGP48443 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC5.4□□□□□ -1.54
RXRGP48443 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.4□□□□□ -1.54
RXRGP48443 AL935212.3-201ENST00000450729 284 ntBASIC5.4□□□□□ -1.54
RXRGP48443 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC5.4□□□□□ -1.54
RXRGP48443 AC016550.1-201ENST00000505348 785 ntBASIC5.4□□□□□ -1.54
RXRGP48443 HMGB1P44-201ENST00000508597 572 ntBASIC5.4□□□□□ -1.54
RXRGP48443 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC5.4□□□□□ -1.54
RXRGP48443 AC104108.1-201ENST00000509930 412 ntBASIC5.4□□□□□ -1.54
RXRGP48443 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC5.4□□□□□ -1.54
RXRGP48443 TBCA-203ENST00000517679 545 ntTSL 3 BASIC5.4□□□□□ -1.54
RXRGP48443 HMGB1P1-201ENST00000522557 636 ntBASIC5.4□□□□□ -1.54
RXRGP48443 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.4□□□□□ -1.54
RXRGP48443 HMGB1P40-201ENST00000525121 540 ntBASIC5.4□□□□□ -1.54
RXRGP48443 OR5D15P-201ENST00000531671 942 ntBASIC5.4□□□□□ -1.54
RXRGP48443 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC5.4□□□□□ -1.54
RXRGP48443 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC5.4□□□□□ -1.54
RXRGP48443 MIR7853-201ENST00000584820 132 ntBASIC5.4□□□□□ -1.54
RXRGP48443 NF1P5-201ENST00000588287 448 ntBASIC5.4□□□□□ -1.54
RXRGP48443 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC5.4□□□□□ -1.54
RXRGP48443 AC125494.3-201ENST00000602759 455 ntBASIC5.4□□□□□ -1.54
RXRGP48443 AC087763.1-201ENST00000603391 286 ntBASIC5.4□□□□□ -1.54
RXRGP48443 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC5.4□□□□□ -1.54
RXRGP48443 AC006946.3-201ENST00000609791 756 ntBASIC5.4□□□□□ -1.54
RXRGP48443 AL136295.6-201ENST00000610486 658 ntBASIC5.4□□□□□ -1.54
RXRGP48443 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
RXRGP48443 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC5.4□□□□□ -1.54
RXRGP48443 AC138907.10-201ENST00000623708 983 ntBASIC5.4□□□□□ -1.54
RXRGP48443 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.4□□□□□ -1.54
RXRGP48443 CDRT1-208ENST00000630868 794 ntBASIC5.4□□□□□ -1.54
RXRGP48443 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.55
RXRGP48443 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
RXRGP48443 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
RXRGP48443 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
RXRGP48443 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.4□□□□□ -1.55
RXRGP48443 MAPK10-304ENST00000641341 3984 ntBASIC5.4□□□□□ -1.55
RXRGP48443 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
RXRGP48443 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
RXRGP48443 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
RXRGP48443 AL138820.1-201ENST00000617901 5305 ntBASIC5.4□□□□□ -1.55
RXRGP48443 DDX18P3-201ENST00000404856 2007 ntBASIC5.4□□□□□ -1.55
RXRGP48443 AL078621.3-201ENST00000623707 2042 ntBASIC5.4□□□□□ -1.55
RXRGP48443 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.55
RXRGP48443 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
RXRGP48443 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RXRGP48443 AC083843.2-201ENST00000568248 6253 ntBASIC5.39□□□□□ -1.55
RXRGP48443 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RXRGP48443 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RXRGP48443 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
RXRGP48443 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RXRGP48443 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
RXRGP48443 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
RXRGP48443 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
RXRGP48443 RNA5SP27-201ENST00000363839 119 ntBASIC5.39□□□□□ -1.55
RXRGP48443 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
RXRGP48443 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.39□□□□□ -1.55
RXRGP48443 MIR550A3-201ENST00000390735 95 ntBASIC5.39□□□□□ -1.55
RXRGP48443 AP002784.2-201ENST00000397300 549 ntBASIC5.39□□□□□ -1.55
RXRGP48443 AL645733.1-201ENST00000402250 217 ntBASIC5.39□□□□□ -1.55
RXRGP48443 MIR1303-201ENST00000408625 86 ntBASIC5.39□□□□□ -1.55
RXRGP48443 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.39□□□□□ -1.55
RXRGP48443 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC5.39□□□□□ -1.55
RXRGP48443 NANOGP9-201ENST00000439890 892 ntBASIC5.39□□□□□ -1.55
RXRGP48443 ARL5AP2-201ENST00000444698 533 ntBASIC5.39□□□□□ -1.55
RXRGP48443 AL035090.1-201ENST00000454835 332 ntBASIC5.39□□□□□ -1.55
RXRGP48443 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.39□□□□□ -1.55
RXRGP48443 AL161747.1-201ENST00000480068 358 ntBASIC5.39□□□□□ -1.55
RXRGP48443 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.39□□□□□ -1.55
RXRGP48443 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms