Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 DLG2-201ENST00000280241 7730 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
HTTP42858 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
HTTP42858 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
HTTP42858 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
HTTP42858 FREM1-202ENST00000380880 7324 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
HTTP42858 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HTTP42858 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
HTTP42858 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
HTTP42858 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HTTP42858 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC4.81□□□□□ -1.64
HTTP42858 LIG3-202ENST00000378526 8400 ntAPPRIS P4 TSL 1 (best) BASIC4.81□□□□□ -1.64
HTTP42858 UNC79-206ENST00000621021 7377 ntAPPRIS P2 TSL 5 BASIC4.81□□□□□ -1.64
HTTP42858 ENSAP1-201ENST00000392855 326 ntBASIC4.81□□□□□ -1.64
HTTP42858 AC104978.1-201ENST00000449387 391 ntBASIC4.81□□□□□ -1.64
HTTP42858 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC4.81□□□□□ -1.64
HTTP42858 RPL23AP94-201ENST00000512518 302 ntBASIC4.81□□□□□ -1.64
HTTP42858 AC015804.1-201ENST00000622935 435 ntBASIC4.81□□□□□ -1.64
HTTP42858 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
HTTP42858 NIPA1-202ENST00000437912 7613 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
HTTP42858 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
HTTP42858 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
HTTP42858 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC4.8□□□□□ -1.64
HTTP42858 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.8□□□□□ -1.64
HTTP42858 TANK-206ENST00000406287 875 ntTSL 5 BASIC4.8□□□□□ -1.64
HTTP42858 AL590806.1-201ENST00000415818 853 ntBASIC4.8□□□□□ -1.64
HTTP42858 AC236972.1-201ENST00000433225 199 ntBASIC4.8□□□□□ -1.64
HTTP42858 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC4.8□□□□□ -1.64
HTTP42858 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.8□□□□□ -1.64
HTTP42858 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.8□□□□□ -1.64
HTTP42858 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.8□□□□□ -1.64
HTTP42858 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HTTP42858 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.8□□□□□ -1.64
HTTP42858 AL138721.1-201ENST00000616756 179 ntBASIC4.8□□□□□ -1.64
HTTP42858 AC006065.6-201ENST00000625201 545 ntBASIC4.8□□□□□ -1.64
HTTP42858 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HTTP42858 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HTTP42858 ATF7-202ENST00000456903 5218 ntAPPRIS P2 TSL 5 BASIC4.8□□□□□ -1.64
HTTP42858 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HTTP42858 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC4.8□□□□□ -1.64
HTTP42858 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.8□□□□□ -1.64
HTTP42858 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
HTTP42858 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
HTTP42858 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
HTTP42858 AL512326.1-201ENST00000443050 721 ntBASIC4.8□□□□□ -1.64
HTTP42858 RHEBP2-201ENST00000450289 600 ntBASIC4.8□□□□□ -1.64
HTTP42858 AC087477.6-201ENST00000559595 843 ntBASIC4.8□□□□□ -1.64
HTTP42858 AC090312.1-201ENST00000580637 348 ntBASIC4.8□□□□□ -1.64
HTTP42858 MIR5195-201ENST00000583555 115 ntBASIC4.8□□□□□ -1.64
HTTP42858 Z95327.3-201ENST00000610385 572 ntBASIC4.8□□□□□ -1.64
HTTP42858 AL354798.1-201ENST00000622505 329 ntBASIC4.8□□□□□ -1.64
HTTP42858 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC4.8□□□□□ -1.64
HTTP42858 TBCK-201ENST00000273980 8101 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
HTTP42858 KIAA1217-202ENST00000376451 7383 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HTTP42858 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.8□□□□□ -1.64
HTTP42858 C1orf21-201ENST00000235307 10265 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HTTP42858 AL445487.1-201ENST00000415694 1580 ntBASIC4.8□□□□□ -1.64
HTTP42858 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC4.8□□□□□ -1.64
HTTP42858 LIPG-201ENST00000261292 10441 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HTTP42858 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
HTTP42858 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.79□□□□□ -1.64
HTTP42858 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
HTTP42858 SPTLC3-201ENST00000399002 6169 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HTTP42858 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC4.79□□□□□ -1.64
HTTP42858 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC4.79□□□□□ -1.64
HTTP42858 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.79□□□□□ -1.64
HTTP42858 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.79□□□□□ -1.64
HTTP42858 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.79□□□□□ -1.64
HTTP42858 FP236240.3-201ENST00000623061 327 ntBASIC4.79□□□□□ -1.64
HTTP42858 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HTTP42858 IKZF3-203ENST00000346872 9667 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HTTP42858 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HTTP42858 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
HTTP42858 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.79□□□□□ -1.64
HTTP42858 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HTTP42858 NBPF12-203ENST00000611443 5594 ntTSL 5 BASIC4.79□□□□□ -1.64
HTTP42858 ADGRB3-202ENST00000370598 6010 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HTTP42858 AL603750.1-201ENST00000624216 1717 ntBASIC4.79□□□□□ -1.64
HTTP42858 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.79□□□□□ -1.64
HTTP42858 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC4.79□□□□□ -1.64
HTTP42858 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
HTTP42858 HSPE1P12-201ENST00000412576 301 ntBASIC4.79□□□□□ -1.64
HTTP42858 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC4.79□□□□□ -1.64
HTTP42858 HMGN1P15-201ENST00000513870 295 ntBASIC4.79□□□□□ -1.64
HTTP42858 KC877982.1-201ENST00000602313 470 ntBASIC4.79□□□□□ -1.64
HTTP42858 PCNP-208ENST00000627393 136 ntTSL 2 BASIC4.79□□□□□ -1.64
HTTP42858 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HTTP42858 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HTTP42858 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.79□□□□□ -1.64
HTTP42858 OR11H4-201ENST00000315409 1082 ntBASIC4.79□□□□□ -1.64
HTTP42858 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HTTP42858 MIR200C-201ENST00000384980 68 ntBASIC4.79□□□□□ -1.64
HTTP42858 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
HTTP42858 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.79□□□□□ -1.64
HTTP42858 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
HTTP42858 AL358832.1-201ENST00000497800 389 ntBASIC4.79□□□□□ -1.64
HTTP42858 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC4.79□□□□□ -1.64
HTTP42858 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC4.79□□□□□ -1.64
HTTP42858 IGKV2D-19-201ENST00000523346 262 ntBASIC4.79□□□□□ -1.64
HTTP42858 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.79□□□□□ -1.64
HTTP42858 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms