Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 AL359513.1-201ENST00000614364 557 ntBASIC5.28□□□□□ -1.56
HADHAP40939 BNIP3P41-202ENST00000616656 861 ntBASIC5.28□□□□□ -1.56
HADHAP40939 AC008115.4-201ENST00000619780 775 ntBASIC5.28□□□□□ -1.56
HADHAP40939 AP000648.2-201ENST00000624182 404 ntBASIC5.28□□□□□ -1.56
HADHAP40939 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.28□□□□□ -1.56
HADHAP40939 WDR75-207ENST00000631047 270 ntTSL 5 BASIC5.28□□□□□ -1.56
HADHAP40939 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
HADHAP40939 SAMMSON-227ENST00000642114 1199 ntBASIC5.28□□□□□ -1.56
HADHAP40939 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.28□□□□□ -1.56
HADHAP40939 AC090017.1-201ENST00000548612 1779 ntBASIC5.28□□□□□ -1.56
HADHAP40939 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HADHAP40939 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HADHAP40939 AL450345.1-202ENST00000605741 3881 ntBASIC5.28□□□□□ -1.56
HADHAP40939 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
HADHAP40939 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HADHAP40939 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
HADHAP40939 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HADHAP40939 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HADHAP40939 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HADHAP40939 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.28□□□□□ -1.56
HADHAP40939 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HADHAP40939 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.27□□□□□ -1.57
HADHAP40939 AC009313.2-201ENST00000417893 1941 ntBASIC5.27□□□□□ -1.57
HADHAP40939 AL451142.2-201ENST00000429076 2090 ntBASIC5.27□□□□□ -1.57
HADHAP40939 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
HADHAP40939 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
HADHAP40939 METTL21EP-201ENST00000298105 713 ntBASIC5.27□□□□□ -1.57
HADHAP40939 RN7SKP74-201ENST00000362849 309 ntBASIC5.27□□□□□ -1.57
HADHAP40939 RNU4-44P-201ENST00000363050 141 ntBASIC5.27□□□□□ -1.57
HADHAP40939 RNA5SP223-201ENST00000365174 120 ntBASIC5.27□□□□□ -1.57
HADHAP40939 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC5.27□□□□□ -1.57
HADHAP40939 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HADHAP40939 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.27□□□□□ -1.57
HADHAP40939 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.27□□□□□ -1.57
HADHAP40939 OR6C64P-201ENST00000419708 825 ntBASIC5.27□□□□□ -1.57
HADHAP40939 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC5.27□□□□□ -1.57
HADHAP40939 UBE2D3P3-201ENST00000426992 425 ntBASIC5.27□□□□□ -1.57
HADHAP40939 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC5.27□□□□□ -1.57
HADHAP40939 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.27□□□□□ -1.57
HADHAP40939 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HADHAP40939 AL353597.2-202ENST00000434901 373 ntBASIC5.27□□□□□ -1.57
HADHAP40939 CLUHP1-201ENST00000435012 1190 ntBASIC5.27□□□□□ -1.57
HADHAP40939 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC5.27□□□□□ -1.57
HADHAP40939 MOB1AP2-201ENST00000446060 614 ntBASIC5.27□□□□□ -1.57
HADHAP40939 NOP56P2-201ENST00000447491 769 ntBASIC5.27□□□□□ -1.57
HADHAP40939 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HADHAP40939 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC5.27□□□□□ -1.57
HADHAP40939 RPL7AP52-201ENST00000458096 790 ntBASIC5.27□□□□□ -1.57
HADHAP40939 RN7SL189P-201ENST00000468631 289 ntBASIC5.27□□□□□ -1.57
HADHAP40939 RPS27AP16-201ENST00000492222 470 ntBASIC5.27□□□□□ -1.57
HADHAP40939 AC093763.2-201ENST00000505334 1223 ntBASIC5.27□□□□□ -1.57
HADHAP40939 AC006427.1-201ENST00000514359 712 ntBASIC5.27□□□□□ -1.57
HADHAP40939 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.27□□□□□ -1.57
HADHAP40939 RNU6-941P-201ENST00000516346 108 ntBASIC5.27□□□□□ -1.57
HADHAP40939 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
HADHAP40939 UBTFL9-201ENST00000534504 1148 ntBASIC5.27□□□□□ -1.57
HADHAP40939 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.27□□□□□ -1.57
HADHAP40939 AC004825.1-201ENST00000555068 586 ntBASIC5.27□□□□□ -1.57
HADHAP40939 DPRXP4-201ENST00000578053 568 ntBASIC5.27□□□□□ -1.57
HADHAP40939 MIR1269B-201ENST00000580405 75 ntBASIC5.27□□□□□ -1.57
HADHAP40939 RN7SL708P-201ENST00000580952 299 ntBASIC5.27□□□□□ -1.57
HADHAP40939 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.27□□□□□ -1.57
HADHAP40939 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC5.27□□□□□ -1.57
HADHAP40939 AC018618.2-201ENST00000604770 446 ntBASIC5.27□□□□□ -1.57
HADHAP40939 AC018695.5-201ENST00000605872 315 ntBASIC5.27□□□□□ -1.57
HADHAP40939 AL512329.2-201ENST00000607350 548 ntBASIC5.27□□□□□ -1.57
HADHAP40939 AC211433.2-201ENST00000608433 387 ntBASIC5.27□□□□□ -1.57
HADHAP40939 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
HADHAP40939 AC092747.4-201ENST00000620519 1861 ntBASIC5.27□□□□□ -1.57
HADHAP40939 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC5.27□□□□□ -1.57
HADHAP40939 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HADHAP40939 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
HADHAP40939 AP000756.2-201ENST00000624168 2567 ntBASIC5.27□□□□□ -1.57
HADHAP40939 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
HADHAP40939 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
HADHAP40939 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.27□□□□□ -1.57
HADHAP40939 AL590763.1-201ENST00000398297 1545 ntBASIC5.27□□□□□ -1.57
HADHAP40939 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
HADHAP40939 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
HADHAP40939 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HADHAP40939 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HADHAP40939 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
HADHAP40939 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HADHAP40939 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.26□□□□□ -1.57
HADHAP40939 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HADHAP40939 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.26□□□□□ -1.57
HADHAP40939 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
HADHAP40939 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
HADHAP40939 AC090971.4-201ENST00000560291 1800 ntBASIC5.26□□□□□ -1.57
HADHAP40939 RNA5SP183-201ENST00000362452 119 ntBASIC5.26□□□□□ -1.57
HADHAP40939 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
HADHAP40939 AP000357.1-201ENST00000409926 1165 ntBASIC5.26□□□□□ -1.57
HADHAP40939 RN7SKP278-201ENST00000410504 342 ntBASIC5.26□□□□□ -1.57
HADHAP40939 SLC35E1P1-201ENST00000419313 864 ntBASIC5.26□□□□□ -1.57
HADHAP40939 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.26□□□□□ -1.57
HADHAP40939 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC5.26□□□□□ -1.57
HADHAP40939 RPS4XP16-201ENST00000427198 791 ntBASIC5.26□□□□□ -1.57
HADHAP40939 UBE2V1P6-201ENST00000430840 422 ntBASIC5.26□□□□□ -1.57
HADHAP40939 AC009238.2-201ENST00000431026 355 ntBASIC5.26□□□□□ -1.57
HADHAP40939 RPL7L1P9-201ENST00000431298 745 ntBASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 130.4 ms